LOC122325009 (LOC107726732,LOC107549670,LOC107726733,LOC107697073,LOC107549671,LOC107697074,LOC107553823,LOC107678815)


Basic Information

Item Value
gene id LOC122325009
gene name LOC107726732,LOC107549670,LOC107726733,LOC107697073,LOC107549671,LOC107697074,LOC107553823,LOC107678815
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22900984 ~ 22906361 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219824.1
TTTCAAAGCACAcaaagacagcaaaaaaaagaaacatggtCACATGTCTTGTCGTGCTCTTAGTTCTGGTCCAGTGGTCCTGGGCTCAGGAAGACCCTCTTCTGCCTTTCTCTGAACACCTGGACCTCGAGCACAAGGTGCAGCTGAAGTGGGGATTTGATGAGATCCGGGGCACCATCTTGTTCGAGCTCACGGTCAACACCAGCGGCTGGGTCGGTTTCGGCTTCAGCCCCAAAGGAGGAATGACTGGAGCCGACGTCGTGATTGGAGGAGTTGGACCCAAAGGAAGTTATTTCACGgaCCGTCATGCTGTGGGGAAATCAATTCCTTTGGTTGACAAGCAACAAAACTACAAACTTTTGTCTCTCACCAATTCTGATGGGAAAACAGTGATGAAGTTTCAGAGGTCCATCAGTTCCTGTGATGAAAACGATTTACCCATCACTGATCTCCCCATGAAGCTGATCTACGCGTACGGAGACACTGATGAAATCGCGTACCACAGCAACCGAAGAGGCACAAAGGAGCTGAACCTGTTGAAGTACATGCCTCAGTCCAACCCTCCAAACAAGAAGTATTTCGACATGACTATGATCAATTTCACTGTGCCGGCCAACCAAACCCACTATCACTGCAAGATCATGAAAGCACCGACTTTTCACAGCAAACAGCACATTTATCGCATTGAGCCGGTGATCACAAACTTCGACCTCGTGCATCACCTGCTGCTGTACCGCTGTCCTCCGAGCGTGACGTCTGAGTCGTTTGAGGCGGAGTGTTATTCTGGGGTGGACGAAGAGTGTATGGAGGCTGTAGCTGTGTGGGGAGTTGGTGGAGGGgATTTTGAATTTCCTGAGGTGGCAGGACTTCCAGTTGGAGGAAATGTTGGAGAGTTTCTCTACAGGCTTGAAGTGCATTACAACAACCCAAATAAAAGTGCAGGTCGAGTCGATAGCTCAGGTCTGCGGTTCTATTACACATCTGAACTCCGTCAGCACGATGCAGGTGTTTTAGGAACAGGGCTTGCGGTGGCCCTGCCATACGCCATCCCACCCAAAGCCAAATCCTTCCTCACGTACGGTCTGTGTGACACGGCTTATATTCCAAAGGTTCTGGAGACGTCAAATGATCTTCAGGTGTTCTCCGTGATGCTGCACACACACTTAGCTGGGAGAAAGGTGCAAGTCGGACACTTCAGAGGAGATAAACAGATCGATTTTCTAGCTGTGGATGAAAACTATGATTTTGAATATCAGGAAATAACCAATTTGGGTAAAATTAAGACCGTAAAATTGGGTGACAAATTGCTGGTGGAGTGCACTTATAACACTGAAAACCGCAGCACACTCACATGGGGGGGGCTCTCAACTTCAGATGAGATGTGTTTGGCCTTCGTCTTCTACTATCCAGCTATGAATCTGAGCACCTGTGTGAGCTTCCCTAATACAACCACTTTAATATCTGAGATGGGAGCAAAAGATCCAGAtacTTGGTTCAAAATGATGTCCACAAAGACTTGGACTGACACGTCTATTAATCAGTACCAACAAACACTGAAGAGAATCGACCAGCTCGTCATAGTCATGAACTCGAACAACAACATATCGATCAACACCGGGCTGATTCCTGACCTCAAAGCCATCCCATCTGCACCCTGCATGAACAGCAGTGCCACCAAAAGTCTTGCTTTACTATCGCTTCTCCTCTGCTGGGCAGTGCAGTGGGCATCCTTTTGAAACATTCATGCAAAATAGAACTGATGTAACTGTCATTGtctaaataaatgtcaataacTTTACAATTTTAGACTTTACACTAGCTTTAATTGCCTTTTTGCACTCTACAATATAACAACCTTTAAATAATCTTAAAGAATTAACTCGACAGCATGATTCAGAATGATTTTCcttgaattataattataattttaaagaacaaaagagca

Function

NR:

description
PREDICTED: DBH-like monooxygenase protein 2 homolog

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005507 copper ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219824.1 True 1945 mRNA 0.46 13 22900984 22906361

Neighbor

gene id symbol gene type direction distance location
LOC122325007 LOC107726733,LOC107726732,LOC107726734 coding upstream 1063 22895007 ~ 22899921 (+)
LOC122325205 LOC107726734 coding upstream 7106 22889804 ~ 22893878 (+)
LOC122325206 LOC107726734 coding upstream 12313 22884107 ~ 22888671 (+)
LOC122325208 LOC107726734 coding upstream 18008 22878750 ~ 22882976 (+)
efr3bb efr3bb,ccl33.2,LOC107726755,LOC107678842,LOC107697142,LOC107549699 coding upstream 61538 22807159 ~ 22839446 (+)
LOC122325008 LOC107726732,LOC107678815,LOC107697073,LOC107549671,LOC107549670,LOC107697074,LOC107726733 coding downstream 1163 22907524 ~ 22914772 (+)
dusp23a LOC107726750,LOC107678830 coding downstream 8955 22915316 ~ 22917280 (+)
unc93a unc93a,LOC107678861,LOC107743326,LOC107697148 coding downstream 127338 23033699 ~ 23038040 (+)
ttll2 LOC107678816,LOC107727576,LOC107743327,LOC107697071,LOC107549674,LOC107603067 coding downstream 133461 23039822 ~ 23042379 (+)
gpr31 gpr31,LOC107549704,LOC107743300,LOC107697152,LOC107678862 coding downstream 143902 23050263 ~ 23053054 (+)
G141091 NA non-coding upstream 343482 22557229 ~ 22557502 (+)
G141084 NA non-coding upstream 358452 22542136 ~ 22542532 (+)
G141081 NA non-coding upstream 359657 22541118 ~ 22541327 (+)
LOC122324401 NA non-coding upstream 786117 22098405 ~ 22114867 (+)
G141121 NA non-coding downstream 14332 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 160226 23066587 ~ 23073665 (+)
LOC122324747 NA non-coding downstream 288260 23194621 ~ 23206082 (+)
G141207 NA non-coding downstream 423830 23330191 ~ 23332366 (+)
G141216 NA non-coding downstream 482131 23388492 ~ 23408824 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 40657 22842805 ~ 22860327 (+)
matn3a matn3a other upstream 146823 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 383301 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 424210 22471761 ~ 22476774 (+)
G140785 NA other upstream 1056283 21844146 ~ 21844701 (+)
pln NA other downstream 437354 23343715 ~ 23351655 (+)
G141475 NA other downstream 1166510 24072871 ~ 24074423 (+)
G141524 NA other downstream 1533882 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 1550629 24456990 ~ 24482661 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 2062519 24968880 ~ 24994837 (+)

Expression


Co-expression Network