LOC122325011 (LOC107742110,LOC107581491,LOC107664824,LOC107658182)


Basic Information

Item Value
gene id LOC122325011
gene name LOC107742110,LOC107581491,LOC107664824,LOC107658182
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7156267 ~ 7158619 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219826.1
TCCGCACACTTCACTTCAGACCGCGCTACTGCGAGCGTCGCGATGGATGTACACAGAGCTGGCTCGGTCGACTTTCGGGATTGTAATATGGATGAAACGGATATGAAAAACAGGAAGGTGCAACACCAGGAGGAACGCGTCGACAGCGGCGTGGATTCGCTGAAGGAGGACGAGTATATGAAAATTGTGGAGGAAATTGAGACTTTGCTTCTTGGAGACCGGATTGCGATTCCGAAGGGGACGTGCGAGTCTTGGACGCAAGAAGTCACCGAGGATGGAGACACGTATCTTCACCTTGCCATCATTCACAAGGCGGACGACTATGCCATCCAGATTATCAAACAGTGTCAGAACGACCCGTTCCTGAACAGACAGAACAACCAGAGACAGACTGCCCTGCATCTCGCCGTCATCACGGATCAGCCACACATGGTGGACAGACTGCTCAAGGCCGGCTGCGATCCACGGCTGGTGGACCAGAGCGGGAACACGGCCCTCCACATCGCCTGCAAAAGAGGCTCGCAGGCTTGCTTCTCGGTGCTGACTCAAATTCAGACCCAGCATCTACACTCCATTCTCAGCTTCCCGAACTACAGCGGACACATGTGTCTCCACATAGCGGCCATTAACAACTACCTCTCAATGGTGGAGAGTCTGGTCCAGCTTGGGGCGGATGTAAACGCAAAGGAGCAGTGTAGCGGCCGTACGTCACTCCACTTGGCCGTGGACCTGCAGAACCTGGATCTGGTGCACGTGCTCATCACTTTGGGAGCGGATGTCAATAGTCTAACCTACGGCGGGTACACGCCGTACCACCTGACCTTCGGCCGCCAGAACAGCGAGATCCAGAGGCAGCTTTACACCCGGACGGCTCAGGAGCTCAGAGCGATGCCGGAGAGCGAGTCAGAGGACAGCGATGAGGACTGGATGTCCGATGAAGAATGTATCTATGACGATATCCAGTTCTGTGGGAGATAGTCGGGCCCTCGGGACAACATTCCCTGTGATGCAATGCAGCGAAGGCCGTAGGTGCTGTCTCTAGGTCTGGGACGGGGTCCGCCTTATCCCAGGACGTCAATCCCTCGATGGGACTTCTATAGTGGAAGACCCGAGCCCCTTCCAGGGGCGCGACGGTGGTGGTGCTGTTCAACACGGAAAACCCCCCCCGAAGATAGCTGGACCAAAAGCTTTACCAATAATCCAAAGAGTTgggaaaatgtgtatattttgtgaatatatagagagagatatatttttaatatttgtaaatacgCGAAATGAAACACTTGTTGATATGTTTATAGTCTATATATGACACTGTgagaatatttttacattaaaagcaaaagaaatgacGCAGA

Function

NR:

description
PREDICTED: NF-kappa-B inhibitor alpha-like

GO:

id name namespace
GO:0009615 response to virus biological_process

KEGG:

id description
K04734 NFKBIA; NF-kappa-B inhibitor alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219826.1 True 1361 mRNA 0.52 6 7156267 7158619

Neighbor

gene id symbol gene type direction distance location
LOC122325354 LOC107742115,LOC107664810 coding downstream 31584 7121351 ~ 7124683 (-)
flrt2 flrt2,LOC107752686,LOC107664820,LOC107564782,LOC107701229,LOC107570088,LOC107706955 coding downstream 447613 6673230 ~ 6708654 (-)
glrx5 glrx5,LOC107752683,LOC107664827,LOC107747371 coding downstream 686198 6467779 ~ 6470069 (-)
meis2b meis2b,LOC107664830,LOC107668148,LOC107582109,LOC107712444,LOC104938729,LOC105017579 coding downstream 787512 6350830 ~ 6368755 (-)
actc2 zgc:86709,actc1,ACTC1,actc1a,LOC108414322,LOC105024319 coding downstream 834988 6317799 ~ 6321279 (-)
LOC122325548 LOC107742115,LOC107664810 coding upstream 64017 7222636 ~ 7225982 (-)
LOC122325143 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding upstream 96880 7255499 ~ 7257574 (-)
LOC122324872 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933 coding upstream 150091 7308710 ~ 7313322 (-)
LOC122324873 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 coding upstream 163037 7321656 ~ 7325677 (-)
nfkbiaa NA coding upstream 209692 7368311 ~ 7370195 (-)
G136694 psma6b,psma6a,psma6,LOC107580710,LOC107664826,LOC107693094 non-coding downstream 4513 7151390 ~ 7151754 (-)
LOC122324389 NA non-coding downstream 16976 7133748 ~ 7139291 (-)
G136689 LOC107581525,LOC107742114,LOC107664807,LOC107658183,LOC107721806,LOC107597854,LOC107737069 non-coding downstream 25682 7127213 ~ 7130585 (-)
G136506 NA non-coding downstream 758157 6383432 ~ 6398110 (-)
G136440 NA non-coding downstream 909376 6246263 ~ 6246891 (-)
G136716 NA non-coding upstream 122753 7281372 ~ 7281804 (-)
G136717 NA non-coding upstream 202248 7360867 ~ 7396292 (-)
G136724 NA non-coding upstream 327274 7485893 ~ 7487411 (-)
G136758 NA non-coding upstream 422406 7581025 ~ 7652975 (-)
G136772 LOC107721802,LOC107712829,LOC107658155,LOC107669132 non-coding upstream 510961 7669580 ~ 7771831 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other downstream 704768 6432762 ~ 6451499 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other downstream 742254 6410962 ~ 6414013 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other downstream 853291 6274754 ~ 6302976 (-)
zpax2 NA other downstream 1225145 5924066 ~ 5931122 (-)
G136357 NA other downstream 1452356 5701679 ~ 5703911 (-)
G136707 NA other upstream 138242 7296861 ~ 7305724 (-)
LOC122324874 tmem30ab,LOC107721815,LOC107714749,LOC107658180,LOC107597847,LOC107664818,LOC107581488 other upstream 176769 7335388 ~ 7340455 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other upstream 266217 7424836 ~ 7429282 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other upstream 273441 7432060 ~ 7436498 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other upstream 385737 7544356 ~ 7601602 (-)

Expression


Co-expression Network