paqr8 (paqr8,LOC107698331,LOC107732380,LOC107553447)


Basic Information

Item Value
gene id paqr8
gene name paqr8,LOC107698331,LOC107732380,LOC107553447
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18018219 ~ 18021576 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219850.1
tgcaatgaaatgaaaacggTGACTTAAAATGTggttatacattttcttttaagtaaATCTACAGTAGTACTTCAAGGgtccatatttttttctgatagcCGATGATAACTGATAATAGTACAATATTGTTCCAAAATGCTTGTAATTGTGTATTTTCAAGACACGTGCAATACTTTATTAATTTGAGAAAATCTAAGGTAACGTAAACATAGACTGTTGTCTATTATCAATGTTTTAATGCCATCTATCGGCGAACATCTGTAACCTAATGTGATGtccatattgtatttttgactgaatgaatgaattaattaatttaatagaaaGGGTTCTGTTGGTCAACTAATTTTATTTTCGGAAACCAGTGTTTTATGATGGGTTTTATAATCGTGCTGCTGTACAATTAagtgtttttgcagtttttcttcACCTTTATCATTTTGCTCATTGGAACAGTGAAGTGAGTGAACTGAACTGAGTCATTTGAGTTACTTGTAACCCCGCCTAGATTCACGGAGCCGGCACAACAGGTCCCTCTTTGGAGACTTTGACAGGCACATAGCAGTTACCAaggttaaaatgcaaaatgtctgAGGGCAGGATTTAATCTTTGGGTCGATATGACcccatgtattttaaaaaaaaaagcaactgaaAAGAACGAAGAGTGACTGATCCTGTTCCGCACAGCTCATTTTCTGTCACCGATCCAGAGTTTCACCATGTCAAGCGGAGTTTTGGCTCGTCTGAGTACGCTGACTTTGAGTTTACAGCAGCTGGGTCAGTTACCACACTTGTCGAACTGGTTGCCCCGTCTACCTTTACCTCAAGCCACTGTTCGTGCCTCTGATGTGCCGAGCCTGTTTCGCGAGCCCTATATCTTGTCAGGCTATCGTCCAGTGCACCAGGAATGGCGGAGCTACTTTTGTAGCCTCTTTCAGTGTCACAATGAGTCGCTCAATGTATGGACACACCTGCTGGCAATCCCTGTCATTCTACTCcagttttctttatttgcagGGACATGGGGGCTGACGCTCAACGTGGCGTCTTTGCCTCTGTTTTTGTATGGGCTGTCATCACTTACCTACCTCAGTTTCAGCGTGGCCGCCCACCTGCTGCAGTCACACTCTGAACTGGCCCATTACTCTCTTTTCTTCGTAGACTACGTTGGTGTAGCTATTTACCAGTATGGCTGCTCACTAGGCCACTATTTTTACTGTTCAGAGCCGGCATGGAGGCAGAGTCCAGTGGGTGTTGTGTTTCTGCCCGGTGCTGCTGTCCTGGCCTGGTTGTCCTGCACCAGCTGCTGTTACGCCAAATTTCGTTATCGCCGCCCGTACCCTCCCCGCCGGAAGATCTGCCAGATCATTCCCACCAGCCTGGCTTACATGCTCGACATCAGCCCTGTAGCTTACCGCCTGGCCACCAGATCTTGGGACGAGCCGGTGATGGCGTTTCATGCCCTGCAAGTGGTGTTTTTCATGTTGGCGgctctgtttttctcttgtcCCGTTCCTGAGCGTTTCTTTCCAGGGAGATGTGACATTTTGGGCCACGGACATCAGATCTTTCATATCTTCCTGGCCATGTGTACTATGTGCCAGCTAGAGGCAATGTTCAGAGACTTTCTGGTGCACCGGCAGACTGTTGTAGATGTGCATGGAGAACATTTCATTGTGCTGGCGGGAGGATCGTTCTTCTTATTGGTGCTGTGCAGTGTTCTGACTGCAGTGCTTATGAGAGGAGCTGTGCAAAGgcaactgaagaaaaaaaaatgaaaactattttgaaaagattttacACAGCATATATTGGTATATACTGTAGTACCATGaggtatttattaatataagttGTCAAATAAAATAGTCTCATTTTAGTGCATCATGAGAATTGCGATGGAAagtcctttcttttttttttcttttttcctcaatCACGTTTTTAAATCCCAGATATCAGTCTCAGGGAGGCTGTTTATAGTTTAACtagcaaatatttttacaaattaaatcaaactcaGATACTAAATGGGTTTTTCCCACAAATGAATTTACTGCTGCAGGATAATCTACCACTTAGCCGACATTCCTCTGAGGTGCAGTACTGTATGGCTTTGCATAACTGGCCTGTTTACATGGAACTGTTTGGAATGAGTTTTTCGAAaggcaaaaacattcaaattaaagcTGGATTTGGCCCAAATTAGAACGAGGGAGAGTTGGAGGGGTGAGGGATGAGGGAAACAAAGAGGCTACTTTTGTTTTGCTCCCGGCGTTGTCAGGCAACGGGTTTGTGTTGGAGGAACGGACCAACTCTCGTTTGCTTCTTGTTTATCTTAAATAACATTCATACAGAATATACATACTGTGTTCCTGAAATTTAAATACCATCTGCAGGCCTGGACATAATTGtcctgtttaaatattttgttgtcaGGGTGTGCTGTTCTATATGCTGTGGGGTTCAGCAGTCTCGAAAACTAATTAGATAAAAATCTGACTTAAACTTAAGTTAAGTCAGTTAAATAAAgtcttattattaaaaaaagcaaagtaaCAAAACACGGTGTACAATGTTATACtgataaaatatgttttttatgtgcaaaaaataataattttagttattttcctCCTTGAACTGCCCCATCCCACCCCCTTAATGTAtgatgtactgtatttatttcacaacaAATAATTTCTACCTCAGTTTAACTGGTGTTCAAACTAAAATGTGCCGTAGgtgctttgtgttttaa

Function

symbol description
paqr8 Enables steroid binding activity. Acts upstream of or within response to steroid hormone and signal transduction. Located in plasma membrane. Is expressed in several structures, including brain; female organism; gill; gonad; and intestine. Orthologous to human PAQR8 (progestin and adipoQ receptor family member 8).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0048545 response to steroid hormone biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005496 steroid binding molecular_function
GO:0003707 steroid hormone receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219850.1 True 2764 mRNA 0.41 2 18018219 18021576

Neighbor

gene id symbol gene type direction distance location
LOC122325023 LOC107553448,LOC107732384,LOC107726442,LOC107599077,LOC107696167 coding downstream 859 18014452 ~ 18017360 (-)
znf395b LOC107698366,LOC107553496,LOC107732419,LOC107696161 coding downstream 4692 18007946 ~ 18013527 (-)
si:ch211-63o20.7 si:ch211-63o20.7,LOC107732427,LOC107726431,LOC107698369,LOC107599081,LOC108439852 coding downstream 22957 17989312 ~ 17995262 (-)
slc25a24 slc25a24,LOC107553450,LOC107732372,LOC107698372,LOC107726490,LOC107696157,LOC107599083 coding downstream 42920 17967096 ~ 17975299 (-)
kifap3a kifap3a,kifap3,LOC107726482,LOC107696146,LOC107698375,LOC107732413,LOC107553501,LOC107599114 coding downstream 157188 17843539 ~ 17861031 (-)
stmn4 stmn4,LOC107696168,LOC107698365,LOC107599074,LOC107732359,LOC108257558 coding upstream 9106 18030682 ~ 18036366 (-)
sccpdhb sccpdhb,LOC107698360,LOC108439827,LOC107553427,LOC107578761 coding upstream 94538 18116114 ~ 18123136 (-)
cnstb LOC107732406,LOC107698361,LOC107719106,LOC107696101,LOC107553493 coding upstream 102055 18123631 ~ 18133228 (-)
kif26bb LOC107732424,LOC107553492,LOC107698359,LOC107719102,LOC107696093,LOC107577345 coding upstream 112612 18134188 ~ 18151673 (-)
lft1 LOC107732386,LOC107698358,LOC107553491,LOC107719108,LOC107599070,LOC107696102 coding upstream 139684 18161260 ~ 18163325 (-)
LOC122324448 NA non-coding downstream 110604 17893736 ~ 17907615 (-)
G139567 ivns1abpa,LOC107696153,LOC107726450,LOC107732388,LOC107553504,LOC107683098,LOC107599089 non-coding downstream 218353 17795484 ~ 17799866 (-)
G139565 NA non-coding downstream 224147 17789198 ~ 17794072 (-)
G139387 NA non-coding downstream 401711 17615793 ~ 17616508 (-)
G139386 NA non-coding downstream 402520 17615148 ~ 17615699 (-)
G139591 NA non-coding upstream 65636 18087212 ~ 18107403 (-)
G139651 LOC107696185,LOC107553490,LOC107698357,LOC107719095 non-coding upstream 135225 18156801 ~ 18157647 (-)
G139653 NA non-coding upstream 144550 18166126 ~ 18166731 (-)
G139681 NA non-coding upstream 234282 18255858 ~ 18313605 (-)
G139700 mep1a.2,LOC105894426,LOC107696095,LOC107601466,LOC107719099,LOC106571460 non-coding upstream 317698 18339274 ~ 18339510 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other downstream 194018 17801402 ~ 17824201 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 590096 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1556003 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 1651420 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1913492 16017318 ~ 16104727 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 321887 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 384451 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 1233158 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 1239890 19261466 ~ 19262952 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other upstream 1276658 19298234 ~ 19303968 (-)

Expression


Co-expression Network