armt1 (armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129)


Basic Information

Item Value
gene id armt1
gene name armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13684999 ~ 13689387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219864.1
AGGTGTTCCTACGATATGCGATCCTTCCTGTTTGCAAAGATGGAGGCAGAGGGAACGTCGGTCCCGCGCTCACTCTCTGCTGAGTTTGAGGGGTCCTTTGCCTATCTGACCGTGAGAGACCGACTCCCAACCATACTCACAAAAGTAATAGACACATTACACCGCAATAAAGACAATTTCTTCAAAGAATATGGAGAGgagggGATCCAGGCAGAGAAGACGGCCATCTCTTTCCTGTCCAGGCTGAGGAATGAACTGCAGACAGACAAACCTGTGCTGTCTCTGACTGATAATGCAGAGGACTCCGAGGCCTGGAATGAATACTTGCGAAAACAGCAGGACCTGATGGAAGACGGGAGGCCTGTCAGCTGGTTCAAGTCACCATGGCTCTATGTGGAGTGTTACATGTACCGGCGGATCCAGGAGGCTCTGTATATGAAtCCACCGATGGATAAGTTTGACGCGTTTAAGGAGGGAAAGACACAAAGCTTCTTCCAATCTCAACAAGCCATTAAATCCCTCTGCACATACCTTCAGGAGCTCATCACCAACATGGAGAACATGACCGAGATTCAGCTGCGAGACAACCTTCTCAAATTACTCCAGGTCTCTCTGTGGGGAAACAAGTGTGATCTGTCCATCTCTGCCGGTCAGGACAACTCTCAAAAGTCCAGTCCCATCGATTCTCTTCCTGATCTCCAGCGCTTCATCCTCGTGGATGACTCCAGCACGGTTTGGTCAACACTGGTTGCTTCTCAAGGATCAGGATCATCTGGGATGAAGCATGCCAGAGTGGACATTATTTTAGACAATGCTGGTTTTGAGCTCGTTACCGATCTAGTCCTTGCTGACTTTCTTGTTTCTGCAGGACTAGCCAAGCAGGTCAGATTTCATGGCAAGTCCATCCCATGGTTTGTCTCAGATGTCACCAAACAAGACTTTGAGTGGACCATCATGCAGACCGTGGCAGCCAATCACAAGTGGATGTCAGCCAGCGGTGTCCAATGGAAGCATTTCATGAAGGAGGGCACATGGTCCTACCATGACCACGCTTTTTGGACCTTGCCCCATGAGTTCTGTGACATGGCGGTGGATGCAGCTGATCTCTACAGCACTCTCCAGGGCTCTGATCTGATCCTCTTCAAAGGAGACCTTAACTACCGGAAGCTTACTGGTGATAGGAAATGGGAGCACACAGTTGCGTTTGATCAAGCGCTGAGGGGGTTCCAGCCTGCCCCTCTCTGTAGTCTCAGGACACTGAAGGCTGACGTTCAGGTGGGCttagagccaggccaggccgaGAAGCTCATCTCTCAGGATCCAGACTGGATGACTAACGGCAAATATGCTGTCATTCAGTTTTCCAGTCCACGCAGAAAACAAtagggtctttttttttaaagaaaagcgAGTCCTCACTAAAGAGGAAATTGTTGAGAATGAAGAGataaaggaataaaatgcaCTGAAGATGCTGGTTTAGTTACCAACATGCCAAACAAGTGTGGTGTTGCTTTCACTTTGCTtgtgtaaaagtttttgtttgaaaGCAAATTACATAATGAATCCAACCGATTCTGCATATCAAACACTGAAAATAGTCTTTGCTGACAACTgatcacagtatttttttttttaatatattttctgtttgcaCTGCTGATCTGTATTGTGTAAGTACAGTTACTTAAACACACAGATGTAAACgtggcaaaaaagaaaacatgataaaaatccaATGTGTTGTGTGGTAGGatacacagtaaaaaataatgaaactgaattttaaCTTCTAGTTAAAAGCTGATGACCAAAACACCTTCAGAATAGTGAAACAGGTATATGCATTTTGGGCTAAAAATGTgcagtatataattttttttcttcaaatgtaGTAATTTATGGGCGTAGCGTGGAGTGcataattgaaaataatgtataaagaataaaacaattcTAGCAGAGTGATGGCAATATGGAATGTATGAGGGTTTTGAATGTAGAGGGatgaaaaaagcacaaattcaCAATGATCTACTAATGTCATCATAAGGAAATGCTTTTTGCTTATTGGctgaaaatactgtaaaaaaatactggCCATACATATATCATCTCAGagagtttttgtttacacagttTGGATTGACTAGCACTTTCAAAGCAAGTTTACCAGgttttctggtgtgtgtttggatgAAAGCTTCACCATGATTTCTTTTAGCTTATTTATGAGCATGCTGGAAACGGATGAGAGTCAGGATATCGTGTATGTACTCATACttgttaaaatgctgttttgaaaatttaatgcAACTTAATAAAgattagaaaaacaaa
>XM_043219865.1
GCGTATCGCGGGCTAAAGTTGACCCATGATCCTCATCAGactacaacaaaataaaatgctaactGGTCTCAGTGCAGGTGTTCCTACGATATGCGAGTAAATGGCACAgaTCCTTCCTGTTTGCAAAGATGGAGGCAGAGGGAACGTCGGTCCCGCGCTCACTCTCTGCTGAGTTTGAGGGGTCCTTTGCCTATCTGACCGTGAGAGACCGACTCCCAACCATACTCACAAAAGTAATAGACACATTACACCGCAATAAAGACAATTTCTTCAAAGAATATGGAGAGgagggGATCCAGGCAGAGAAGACGGCCATCTCTTTCCTGTCCAGGCTGAGGAATGAACTGCAGACAGACAAACCTGTGCTGTCTCTGACTGATAATGCAGAGGACTCCGAGGCCTGGAATGAATACTTGCGAAAACAGCAGGACCTGATGGAAGACGGGAGGCCTGTCAGCTGGTTCAAGTCACCATGGCTCTATGTGGAGTGTTACATGTACCGGCGGATCCAGGAGGCTCTGTATATGAAtCCACCGATGGATAAGTTTGACGCGTTTAAGGAGGGAAAGACACAAAGCTTCTTCCAATCTCAACAAGCCATTAAATCCCTCTGCACATACCTTCAGGAGCTCATCACCAACATGGAGAACATGACCGAGATTCAGCTGCGAGACAACCTTCTCAAATTACTCCAGGTCTCTCTGTGGGGAAACAAGTGTGATCTGTCCATCTCTGCCGGTCAGGACAACTCTCAAAAGTCCAGTCCCATCGATTCTCTTCCTGATCTCCAGCGCTTCATCCTCGTGGATGACTCCAGCACGGTTTGGTCAACACTGGTTGCTTCTCAAGGATCAGGATCATCTGGGATGAAGCATGCCAGAGTGGACATTATTTTAGACAATGCTGGTTTTGAGCTCGTTACCGATCTAGTCCTTGCTGACTTTCTTGTTTCTGCAGGACTAGCCAAGCAGGTCAGATTTCATGGCAAGTCCATCCCATGGTTTGTCTCAGATGTCACCAAACAAGACTTTGAGTGGACCATCATGCAGACCGTGGCAGCCAATCACAAGTGGATGTCAGCCAGCGGTGTCCAATGGAAGCATTTCATGAAGGAGGGCACATGGTCCTACCATGACCACGCTTTTTGGACCTTGCCCCATGAGTTCTGTGACATGGCGGTGGATGCAGCTGATCTCTACAGCACTCTCCAGGGCTCTGATCTGATCCTCTTCAAAGGAGACCTTAACTACCGGAAGCTTACTGGTGATAGGAAATGGGAGCACACAGTTGCGTTTGATCAAGCGCTGAGGGGGTTCCAGCCTGCCCCTCTCTGTAGTCTCAGGACACTGAAGGCTGACGTTCAGGTGGGCttagagccaggccaggccgaGAAGCTCATCTCTCAGGATCCAGACTGGATGACTAACGGCAAATATGCTGTCATTCAGTTTTCCAGTCCACGCAGAAAACAAtagggtctttttttttaaagaaaagcgAGTCCTCACTAAAGAGGAAATTGTTGAGAATGAAGAGataaaggaataaaatgcaCTGAAGATGCTGGTTTAGTTACCAACATGCCAAACAAGTGTGGTGTTGCTTTCACTTTGCTtgtgtaaaagtttttgtttgaaaGCAAATTACATAATGAATCCAACCGATTCTGCATATCAAACACTGAAAATAGTCTTTGCTGACAACTgatcacagtatttttttttttaatatattttctgtttgcaCTGCTGATCTGTATTGTGTAAGTACAGTTACTTAAACACACAGATGTAAACgtggcaaaaaagaaaacatgataaaaatccaATGTGTTGTGTGGTAGGatacacagtaaaaaataatgaaactgaattttaaCTTCTAGTTAAAAGCTGATGACCAAAACACCTTCAGAATAGTGAAACAGGTATATGCATTTTGGGCTAAAAATGTgcagtatataattttttttcttcaaatgtaGTAATTTATGGGCGTAGCGTGGAGTGcataattgaaaataatgtataaagaataaaacaattcTAGCAGAGTGATGGCAATATGGAATGTATGAGGGTTTTGAATGTAGAGGGatgaaaaaagcacaaattcaCAATGATCTACTAATGTCATCATAAGGAAATGCTTTTTGCTTATTGGctgaaaatactgtaaaaaaatactggCCATACATATATCATCTCAGagagtttttgtttacacagttTGGATTGACTAGCACTTTCAAAGCAAGTTTACCAGgttttctggtgtgtgtttggatgAAAGCTTCACCATGATTTCTTTTAGCTTATTTATGAGCATGCTGGAAACGGATGAGAGTCAGGATATCGTGTATGTACTCATACttgttaaaatgctgttttgaaaatttaatgcAACTTAATAAAgattagaaaaacaaa

Function

symbol description
armt1 Predicted to enable S-adenosylmethionine-dependent methyltransferase activity; phosphatase activity; and protein carboxyl O-methyltransferase activity. Predicted to be involved in methylation and regulation of response to DNA damage stimulus. Orthologous to human ARMT1 (acidic residue methyltransferase 1).

NR:

description
protein-glutamate O-methyltransferase

GO: NA

KEGG:

id description
K23114 ARMT1; damage-control phosphatase, subfamily III

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219864.1 False 2340 mRNA 0.43 6 13684999 13689312
XM_043219865.1 True 2429 mRNA 0.43 6 13684999 13689387

Neighbor

gene id symbol gene type direction distance location
esr1 LOC107737325,LOC107555768,LOC107556167 coding downstream 1732 13671104 ~ 13683267 (-)
myct1a myct1a,LOC107737339,LOC107665338,LOC107659222,LOC107555747,LOC107556166,LOC107721271 coding downstream 125604 13555926 ~ 13559395 (-)
serac1 serac1,LOC107555766,LOC107737322,LOC107659155 coding downstream 129574 13548658 ~ 13555425 (-)
si:dkey-12h9.6 si:dkey-12h9.6,LOC107659220,LOC107737319,LOC107665359,LOC107555760,LOC107556127 coding downstream 137955 13538787 ~ 13547044 (-)
capn3b capn3b,LOC107659224,LOC107721354,LOC107665384,LOC107737332 coding downstream 158726 13516657 ~ 13526273 (-)
akap12b LOC107721347,LOC107555771,LOC107659213,LOC107711639,LOC107665356 coding upstream 10705 13700092 ~ 13732388 (-)
mthfd1l mthfd1l,si:ch211-266i18.6,LOC107659212,LOC107721348,LOC107665399,LOC107711640,LOC107556131 coding upstream 45882 13735269 ~ 13761950 (-)
si:dkey-25e12.3 LOC107665334,LOC107659167,LOC107721285,LOC107556143,LOC107555748 coding upstream 79213 13768600 ~ 13770849 (-)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386,LOC107555744 coding upstream 91739 13781126 ~ 13804371 (-)
gmds gmds,LOC107721371,LOC107711642 coding upstream 162645 13852032 ~ 13910497 (-)
G138232 NA non-coding downstream 169866 13514765 ~ 13515133 (-)
G138221 slc35f6,LOC107721386,LOC107555739,LOC107683918,LOC107737338,LOC107665330 non-coding downstream 186973 13495682 ~ 13498026 (-)
G138217 zgc:153896,LOC107721358,LOC107665343,LOC107737337,LOC107556161 non-coding downstream 205975 13478772 ~ 13479024 (-)
G138159 LOC107556152 non-coding downstream 291404 13388921 ~ 13393595 (-)
G138162 NA non-coding downstream 293656 13385970 ~ 13391343 (-)
G138335 foxq1b,LOC107659165,LOC107721275,LOC107711626,LOC107665328,LOC107555749,LOC107556144 non-coding upstream 141190 13830577 ~ 13832060 (-)
G138351 NA non-coding upstream 160553 13849940 ~ 13850174 (-)
G138399 LOC107711644,LOC107659205,LOC107721344,LOC107602456,LOC107665390,LOC107602691,LOC107555778 non-coding upstream 251841 13941228 ~ 13999349 (-)
G138407 NA non-coding upstream 255873 13945260 ~ 13945737 (-)
G138401 LOC107721343,LOC107721342,LOC107583935,LOC107721341,LOC107659208 non-coding upstream 258741 13948128 ~ 13953887 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 136408 13547276 ~ 13548591 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other downstream 237611 13423958 ~ 13447388 (-)
LOC122324483 NA other downstream 420715 13260919 ~ 13264284 (-)
mdn1 mdn1,LOC107755265,LOC107737285,LOC107597457,LOC107683937,LOC107665348,LOC107601919 other downstream 1404687 12241801 ~ 12280312 (-)
G137949 mdn1,LOC107755265,LOC107601919,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other downstream 1460729 12222810 ~ 12224270 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other upstream 73948 13763335 ~ 13767824 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other upstream 504346 14193733 ~ 14198528 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other upstream 752146 14441533 ~ 14445925 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 1303712 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 1307738 14997125 ~ 15003202 (-)

Expression


Co-expression Network