usta (ust,LOC107732646,LOC107696116,LOC107726493,LOC107693205,LOC107601503)


Basic Information

Item Value
gene id usta
gene name ust,LOC107732646,LOC107696116,LOC107726493,LOC107693205,LOC107601503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16475351 ~ 16519770 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219917.1
CAAAAGCTGCTCAGTTATGAACTCGATTCTTGGctgaatatttgtttaattaaaattgttgcTATTGTCTCTGCTGCCCATGGCTTCAGGATAACAACGTGACGTGGAAATAGGCTACAAATGCACAGCTGTTTTCACAGacagatattattttatttgtattatttattcaaatagttTGCCGCTAAATGCGTGTGTTGAATTAGTTTTTGTCAGACTGCACCGACGCTTTCCCGCGTCTTCCGCCTGGTGGTGCTAAGAAGCACAAGGCAGCGCGTGAGCTCGAGTCCATCCTCCGGTTGAACTTTTTCCTCCACATTCAGTAATCTGACACCGACACTAACCCCAAAAAGCAGAGGATGGATTCCCAACTTCATTCGCAAAAATAGCTCAGCCAGAGCAGACGGGAAAACACGGCCGAGCTAGGGGGGCCAAACATCTGAACGCGTGCGCTCGCGTGCATCGATCTGTGAAGCGtgtttggtttttgtttaaatgttggCTAAAAAGTTTTTATCTAAAGAGGCGGATGGGTGACGACCATTCTCGGCGCTTCCATGTGAGGAGACGATGAAGAATTACAGCAGCAGTCCCCGTCTAAACAATCACAGCGCGAGTCACAGCACTGATCGGAACAGCAGGAAGAGGTTCTGGTTCTCGGCTCTAGGGCTTCGCTTCTCTCTGCGCGATTATGGTTTCTGCATGGCCACACTGCTGCTCTTCTGTCTCGGCTCACTGTTTTACCAGCTGAACGGAGGACCCCCTAAAGTTCTGCTGGAGATCAGGCAGTATCTCGGAGAATCCACTTTTGTTGACGACCACGGGCCTCCTACACAAAGGGAGCTGCCATTCCCAAGTCAGGTGATCTACAACAGGGTTGGCAAGTGTGGAAGTCGAACAGTTGTCCTGTTGCTGAGGATTCTGGCAGAAAAGCACCAGTTTAACTTGGTGTCCTCTGACATCCATAACAAAACCAGACTCACAAAGCATGAacaggTGGATTTGATGAGAAACATTAGCACTATTCCACAGCCTTTTTTGTACACCAGACATGTTCACTTTCTCAATTTCACAAGGTTTAGGATAGAACAGCCTGTCTACATAAACATCATCAGGGATCCTATTAACCGTTTCCTCTCCAATTACTTTTTTCGTCGTTTTGGGGACTGGAGAGGAGAGCAGAATCACTTGATCCGCACACCCCAGATGAAAGATGATGAGCGATATCTGGACATTAATGTTTGCATCATGGAGAACTACCCAGAGTGTTCTAACCCACGTCTCTTTtacattgttccatacttttgtGGACAACACCCTCAGTGCAGGGAGCCGGGTGTTTGGGCTGTGGAGAGGGCCAAACAAAACGTTATAGAGAATTTCCTACTTGTGGGAAttctggaggagctggaggatgTGTTGCTCTTGCTGGAGAGACTCCTACCTCACTACTTCAGTGATGTCCTAACCATCTACAAGAGTCcagCATTCTGGAAGATGGGGAACCTTACAGGCACAGTGAAGAAGCACATGCCCACTCTAGAGGCCCTACAGGTACTTTACCAAAGGATGAAGTATGAGTATGACTTTTACAACTTCATTCGTGACCAGTTTCATCTCACTAAGAAGAAGATCGGCCTCAAGTCTGCCTCCCAAAACTCTGCTCATGAACCTGACTTTCTCCGCGAGCTCGCCCTCAGGACCCATGAGCCtttggaggaggaggaggaggaggaagaagaagaggacaTGGGGCAAGAAGATGCCAACATCTGGTTGGTTCAGCCCTGAGTAATAGCCATTGAGGTGTAGGCATGGCAGATATCTCATAAGCTTGATGTCTATGTCCAGTCAGGAGGTAGAGTCAAAAGTCCCAGGTTAAAATTGGGTGTTTAACCCCCGTTTTTAACCGGATGACCCTTCAAGACACTCTCAAGAGGAGAAGGGGGTCGCAGAAGGGTCTGGATAATTATTTAAGGAACCAACAATTGTGGCAAAACaattttgttcatctttatGAAATTTAGTTGGTTATGATCATTTCCTGGTGAGATGATTCAAGGTTGGAATTACAGGGATATTGCTTGATTGTCAGAATGGAGGGATGAACTAATTGTGGTTTAGCAGAATGAGATGCTGTGGAAGTCTGATTTTAGGCACTACTTCTGTACACTTGGTACCTGGGTGATCTCAGACTCGCGCGTCAacaacacactttcacacatgAACACATTCAGACTATGCTATGTAGGCGAGTGAGGATCACAACAACGTGCCAAACCTTCAAAGTGCCAAGGATTACTGCATCAAGCTTAGACGCTGTAGCTGTAATCACCGTAAAACAACTCAAACGCACCAATCAGATCTCTTCATCACTCGCTTCCACTTCTGGTTCCAGAAACCTGCTGCAACTCTGTGCCAgaatttcagtctttttttgaaagaatcgTTTTATGTTGTACATGTAAGATGTACAATGAATCAAAACTGTTTGAATGCCTGGAACATGTCAAATGCAGcacattgttcatttaaaatgtttgatgtaGATGTTGAACATGTTCTTGCCTTGTCAGTGTGTCATCTGTTGTGTTCAGTCGTTGCGTAAAATTGGACCCTTATGTTCTTACAGTACTTGGTACACTTTGTGCTAACAACACttaaaagtaatagttcacaCACATTGTAATACATTGTAATGATGTTTTTGTTAGCAGCAATACAATTTTATCCCATCCTGGTTTGCCTTACAGCGAATAACATAAAACTGCTGGGATATCAAATAATATCTTGCTAGTTAAAACTAAGCTATTCAAAGTTCATACTCCTCTGTCAGCGCCTAATGTTTTGAGCAGGATCACAAGCTAAAACAAGAAGACagtaatattaaactaaatgaattattttggaGGTAAAACAAATATACTCATGATCAAGAAAAATGTCACACATATTGATGAAAAAACTAATCTGACAACAGGACAAAAATATTCTTGAATGTGAAAACATGAGTTACTacactgcatttaaactca
>XM_043219918.1
AATTGTCAAAAGCTGCTCAGTTATGAACTCGATTCTTGGctgaatatttgtttaattaaaattgttgcTATTGTCTCTGCTGCCCATGGCTTCAGGATAACAACGTGACGTGGAAATAGGCTACAAATGCACAGCTGTTTTCACAGacagatattattttatttgtattatttattcaaatagttTGCCGCTAAATGCGTGTGTTGAATTAGTTTTTGTCAGACTGCACCGACGCTTTCCCGCGTCTTCCGCCTGGTGGTGCTAAGAAGCACAAGGCAGCGCGTGAGCTCGAGTCCATCCTCCGGTTGAACTTTTTCCTCCACATTCAGTAATCTGACACCGACACTAACCCCAAAAAGCAGAGGATGGATTCCCAACTTCATTCGCAAAAATAGCTCAGCCAGAGCAGACGGGAAAACACGGCCGAGCTAGGGGGGCCAAACATCTGAACGCGTGCGCTCGCGTGCATCGATCTGTGAAGCGtgtttggtttttgtttaaatgttggCTAAAAAGTTTTTATCTAAAGAGGCGGATGGGTGACGACCATTCTCGGCGCTTCCATGTGAGGAGACGATGAAGAATTACAGCAGCAGTCCCCGTCTAAACAATCACAGCGCGAGTCACAGCACTGATCGGAACAGCAGGAAGAGGTTCTGGTTCTCGGCTCTAGGGCTTCGCTTCTCTCTGCGCGATTATGGTTTCTGCATGGCCACACTGCTGCTCTTCTGTCTCGGCTCACTGTTTTACCAGCTGAACGGAGGACCCCCTAAAGTTCTGCTGGAGATCAGGCAGTATCTCGGAGAATCCACTTTTGTTGACGACCACGGGCCTCCTACACAAAGGGAGCTGCCATTCCCAAGTCAGGTGATCTACAACAGGGTTGGCAAGTGTGGAAGTCGAACAGTTGTCCTGTTGCTGAGGATTCTGGCAGAAAAGCACCAGTTTAACTTGGTGTCCTCTGACATCCATAACAAAACCAGACTCACAAAGCATGAacaggTGGATTTGATGAGAAACATTAGCACTATTCCACAGCCTTTTTTGTACACCAGACATGTTCACTTTCTCAATTTCACAAGGTTTAGGATAGAACAGCCTGTCTACATAAACATCATCAGGGATCCTATTAACCGTTTCCTCTCCAATTACTTTTTTCGTCGTTTTGGGGACTGGAGAGGAGAGCAGAATCACTTGATCCGCACACCCCAGATGAAAGATGATGAGCGATATCTGGACATTAATGTTTGCATCATGGAGAACTACCCAGAGTGTTCTAACCCACGTCTCTTTtacattgttccatacttttgtGGACAACACCCTCAGTGCAGGGAGCCGGGTGTTTGGGCTGTGGAGAGGGCCAAACAAAACGTTATAGAGAATTTCCTACTTGTGGGAAttctggaggagctggaggatgTGTTGCTCTTGCTGGAGAGACTCCTACCTCACTACTTCAGTGATGTCCTAACCATCTACAAGAGTCcagCATTCTGGAAGATGGGGAACCTTACAGGCACAGTGAAGAAGCACATGCCCACTCTAGAGGCCCTACAGCTAAAGGCTGGCAGTGCACAGCTTGTCCTGGGCCTCCTCCCCTCTGTCACAGCGAATGAGAGACGCCTACCTTACGCCCACTAACCTGGAAAATATTTCCCACCTTTTCCATGAGCAGATTCTTCTCAAAAGAGAATGAAAGGTGAACAGCACAGGAAAAGGACACTTAAATCACCGATATTTTTAGccactgtaattattttaatgaaacggGTCTAATTTAGACATgatgtcatatttattaatatatgacATTCTTTAGACAAACATGTTGCTATGACAACTGCACACCACTACAGCATGAATCTACTATCCCTGCTTCTTTGgtccaaaaacacacaaaagtatTAGCTTGagaaaaacactaaatgcattGATTATACAGTCAATGAAGAGAaacatattacaatttttaaaaagtcaagcACTTTTCAAAATAGTATCTATCAAAAATGCTTGAACTCTTCTACATTACATTCCTCATGTCATGCAAACTGAGGGAGAATACGGCACagtaagagaaaaataaaaattttaaataacaaaataatgcaaaagcaCACAGAATAAACAAGTATCGAATATTATAAAATACGGTTACTGTTTCCTATGAACAGTACAGATCAATTTGGAGCTAAACCCTGAGACGCA

Function

symbol description
ust Predicted to enable sulfotransferase activity. Predicted to be involved in dermatan sulfate biosynthetic process and protein sulfation. Predicted to act upstream of or within establishment of cell polarity and regulation of axonogenesis. Predicted to be located in Golgi membrane.

NR:

description
PREDICTED: uronyl 2-sulfotransferase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008146 sulfotransferase activity molecular_function

KEGG:

id description
K03193 UST; dermatan/chondrotin sulfate uronyl 2-O-sulfotransferase UST

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219917.1 True 3035 mRNA 0.44 8 16478604 16519764
XM_043219918.1 False 2211 mRNA 0.44 9 16475351 16519770

Neighbor

gene id symbol gene type direction distance location
hpcal1 hpcal1,LOC107549126,LOC107696114,LOC107726415,LOC108411356,LOC105909572,LOC107601527,LOC101077504 coding downstream 31520 16435221 ~ 16443831 (-)
LOC122324754 wtap,LOC107732643,LOC107549122,LOC107693220,LOC107696108,LOC107726473,LOC107601562 coding downstream 153932 16315018 ~ 16321419 (-)
acat2 acat2,LOC107696107,LOC107732634,LOC107549121,LOC107693222,LOC107726488,LOC107601581 coding downstream 160628 16310886 ~ 16314723 (-)
kif25 kif25,LOC107726448,LOC107549120,LOC107696106,LOC107732626 coding downstream 164784 16302191 ~ 16310567 (-)
hebp2 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding downstream 173307 16299274 ~ 16302044 (-)
sash1a sash1,sash1a,LOC107732642,LOC107693212,LOC107696119,LOC107601490 coding upstream 673 16520443 ~ 16690139 (-)
stxbp5a stxbp5a,LOC107679494,LOC107696120,LOC107710208,LOC107726399,LOC108436475 coding upstream 171537 16691307 ~ 16760481 (-)
adgb adgb,LOC107726608,LOC107601183 coding upstream 245945 16765715 ~ 16798477 (-)
rab32a rab32,rab32a,LOC107679502,LOC107601480,LOC107696121,LOC107726484 coding upstream 279990 16799760 ~ 16814144 (-)
grm1a grm1,grm1a,LOC107679500,LOC107696122,LOC107726479 coding upstream 294935 16814705 ~ 16840062 (-)
G139032 NA non-coding downstream 19948 16454884 ~ 16455403 (-)
G139029 apobb.1,LOC107693214 non-coding downstream 23458 16450526 ~ 16451893 (-)
G138983 NA non-coding downstream 149598 16323406 ~ 16325753 (-)
G138960 NA non-coding downstream 258635 16214344 ~ 16216716 (-)
G138956 NA non-coding downstream 267350 16207070 ~ 16208001 (-)
G139139 NA non-coding upstream 323448 16843218 ~ 16845168 (-)
G139145 NA non-coding upstream 330784 16850554 ~ 16946540 (-)
G139147 sesn1,LOC107601204,LOC107679493,LOC107601436,LOC107696127,LOC107726620 non-coding upstream 339573 16859343 ~ 16860256 (-)
G139149 NA non-coding upstream 340556 16860326 ~ 16896383 (-)
G139148 sesn1,LOC107726430,LOC107601436 non-coding upstream 370169 16889939 ~ 16891460 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 13135 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 108552 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 370624 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 481706 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 630777 15844354 ~ 15844574 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 827036 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 1281632 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 1823693 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 1886257 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 2734964 19254734 ~ 19256272 (-)

Expression


Co-expression Network