LOC122325066 (LOC107687338,LOC107597794,LOC107728091,LOC107712844,LOC107581495)


Basic Information

Item Value
gene id LOC122325066
gene name LOC107687338,LOC107597794,LOC107728091,LOC107712844,LOC107581495
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 8572552 ~ 8591185 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219920.1
TCCGTTGTCAGGGGGAGTGTTTAAACTGTAGCAGAGAAGTACACGGAGGAGAGTTTCGAGGGCATCTTCACAGTGAAGAACTTCTCAAAATAGACGGATAAACTTTTGAAATAAGCAATGTCTATAATTAAGAAGTTGTAGCAATGAAAATCTAGCAACTGCGGAAGCTTTAGCAGTCGGTGAAGTTGTAATACCACTCGTCCATCACACTTGCTAGATACTTTTATAGACTTCCTATTTTGCTTCAAGACAGCGACTTGTTAAAGTcccacatttttatataatctaCAAACTATGGCTTAGCTTATCATATTACACTTAGTACGCAAACAAGGGTAAGGTTACATTTGATCAAAGCAATGGAGCAGATCTGTCTTCGCCTGGTCAAACTCGACGTGTTGAGCAGCATAAAGTCGTTAAGCCGGTTTGATTCGGTGTTCAGACGGTGCGGACAGAGACCGGGTCCGGCTCGGACAGACTCACCCGTCTCTCTGAAACCCAGAGGACCTGTCACAGCGGCTCCTGCAGCTCTCTGCCCGAGGTCGAGGTCGAGACTCTGTGTAACAGCAGCCAGAGCTCCGGGTCACCCGTCCGTCGTTCACTTCCACACCTCGGCCAGGCGGAGGGCTTTACCCGCTCCTCTGATATGGATGCTGCTGAAGCCTCTGCAGAAGCTCATGGCCGTCATACTGGGCAGGAGTATTAGGAAATGGTGGTTGGCTCTGCCGGGCAATAAAAAGCAGCTGTTTCGTGAATGGACATGGCGTCGACGCTGGCACTTTGTGGGAGCTGGGGCAGGACTGCTGTTCTTCGTCTCCCTCTTTCTACTCACTCATCTGGACGAATCTCCGGTCACAGGCAGGACCCGACTGCTGGTGTTCAGCAGAGACAACTTCACGCGGCTGGCTGAGTTCACTGCAGAAGCGTACATGGAGGAGTTTAAGGAGTCTCTGATCGCTCCGTCGGATCCCAGGCATCAGGCTGTAGAGTTAGTGCTTCAGACTCTGGTCGAGAGGAACCAGGACATTGCTGAGATTTCCTCTGTCTCATGGACAGTCCACGTGGTGGAGGGCCCTACAGTCAATGCGTTCGTTTTGCCCaaTGGAAAGGTCTTCATCTTCACAGGAATGCTTGAGGCTGTAGCAGACATCCATCAGCTGGTGTTTATACTGGGACATGAGATGGCTCACGCTCTGATTGGTCACGCAGCAGAGCAAGCCAGTTTATCTCACGTGGTGGAGCTGTTGTCTCTCGTCCTGTTGACGGCGATCTGGGCGATCTGTCCCCGGGACAGTTTAGCCGTGCTGGGCCACTGGATTCAGGGCAAACTGGTGCAGTTCCTATTTGACCGGCCCTTCAGTCGTAAGCTGGAGGCAGAGGCGGACCAGGTCGGCCTGAAGCTGGCTGCCAAGgcGTGTGCTGACGTGAGGGCGGGCCCCGTCTTTTGGCAGCAGATGGAGATCTATGATCAGTTGAGAGGCGAGCCTACCGTCCCCGAGTGGCTGTCCACACACCCTTCTCACCAGAACCGCGTCAGACAGTTGGACCGCCTCGTCCCTGAGGCCGTGGAGCTCCGCGCACGCTGTGGCTGTCCCGCCTCCCCAAAGCTACCCCGTGTCGTTTTCCACCAGGCTGTTAAATTGCTTCTTGACaacactgaaaaacaagaaaagattGCACAAGAGGAAAAGAATGAGAAACGGAGAGCCGGAGTCATGCTGCCTCCTGTCCTGACTCCAGGGTCTCAGCCTCAGCTGGGAGGAGCGCTGGCCACATCCACTCTGCTTAGTAAATGAGACTTGACGAAACATGACTGACAGGGACAAATTCAAGCTTTCCTTTTCACTTCTCTTTTTCCAGTCCAGTAGCTCTGAGCAAGGACTGAGAGGATTGTCAGATAGAAccagacagttttttttttttgatctgtTTGATTAGCTGTCGCTTTGATACCTACGTCAGTTGGTCTGTGAGATGTTTTGAGTGGGAGCATGTACATCATTTGTGTGAGATGCTTTCGCGAGTTTACGCTCCTCCTTCCGAGTCGTGTTAATAATGGAGCAATTGTAAATGGGTTTTTGATTGGTTTTAATGATGTTATTAGCATAAGACCCCTGTAAAGTTGAATGCATTATTGCGTACAGTACATTATTCATCAAACATCTGCTTCTGCTTTAATGTCCCCTATAGGTTCCAGGCTGTAATGTAACTACTGCATAGCAGCTAATGTCACCGTGTTTGAAGCTGGTAGGAGCTTTGGACACACTACATTATTTAGAGGATTTATCAATAGGCAGCTGATGCTAAGTGAGCCCAACACTTGTGTTCTTGACaagtgttatatttattttaaatgcactttgtaTGAATGCTATGAATGTAAGGAATATGGGACTGTAATTACATACAAGATCAACTAA

Function

NR:

description
PREDICTED: metalloendopeptidase OMA1, mitochondrial-like isoform X1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K23010 OMA1; metalloendopeptidase OMA1, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219920.1 True 2420 mRNA 0.49 9 8572552 8591185

Neighbor

gene id symbol gene type direction distance location
LOC122324856 LOC107733811 coding downstream 164295 8402799 ~ 8408257 (-)
tmed5 tmed5,LOC107733818,LOC107597813,LOC107712842,LOC107581519,LOC108415774 coding downstream 231602 8336607 ~ 8340950 (-)
itpa itpa,LOC107712840 coding downstream 285307 8284042 ~ 8287245 (-)
vamp4 vamp4,LOC107712870,LOC107733808 coding downstream 301329 8261758 ~ 8271223 (-)
myoc myoc,LOC107669152,LOC107581474,LOC107712866,LOC107697243,LOC107733809 coding downstream 314561 8251452 ~ 8257991 (-)
prkaa2 prkaa2,LOC107716554 coding upstream 487560 9078745 ~ 9095364 (-)
bsnd LOC107697389,LOC107716551,LOC107566144,LOC107687198,LOC107712846,LOC107581515 coding upstream 744746 9335931 ~ 9339220 (-)
si:dkeyp-51f12.3 NA coding upstream 748178 9339363 ~ 9355284 (-)
si:dkeyp-51f12.2 si:dkeyp-51f12.2 coding upstream 766223 9357408 ~ 9359541 (-)
ftr85 LOC107697417,LOC107716559,LOC107566153,LOC107712832,LOC107581513,LOC107580448 coding upstream 785864 9377049 ~ 9381993 (-)
LOC122325283 NA non-coding downstream 258585 8311491 ~ 8313967 (-)
G136935 NA non-coding downstream 311260 8261083 ~ 8261292 (-)
G136909 NA non-coding downstream 364608 8202900 ~ 8207944 (-)
LOC122325257 NA non-coding downstream 389893 8153665 ~ 8182659 (-)
G136804 NA non-coding downstream 659988 7912148 ~ 7912564 (-)
G137053 NA non-coding upstream 159362 8750547 ~ 8750798 (-)
G137057 NA non-coding upstream 230606 8821791 ~ 8822181 (-)
G137102 NA non-coding upstream 527750 9118935 ~ 9124743 (-)
LOC122324791 NA non-coding upstream 631094 9222279 ~ 9240697 (-)
G137132 NA non-coding upstream 661527 9252712 ~ 9252970 (-)
zyg11 zyg11,zyg11b,LOC107712854,LOC107669142,LOC107658153,LOC107721807 other downstream 772963 7785602 ~ 7799589 (-)
G136754 zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807 other downstream 876487 7693955 ~ 7696065 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other downstream 970950 7544356 ~ 7601602 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other downstream 1136054 7432060 ~ 7436498 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other downstream 1143270 7424836 ~ 7429282 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other upstream 507 8591692 ~ 8600955 (-)
G137054 LOC107660256,LOC107566921 other upstream 227669 8818854 ~ 8819327 (-)
G137056 NA other upstream 229969 8821154 ~ 8821719 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other upstream 664363 9255548 ~ 9283383 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other upstream 734468 9325653 ~ 9335061 (-)

Expression


Co-expression Network