napbb (si:rp71-81o21.2,napb,LOC107756672,LOC107667620,LOC107742707,LOC108411873,LOC107593246,LOC103023605,LOC106571745,LOC106610947,LOC100691502)


Basic Information

Item Value
gene id napbb
gene name si:rp71-81o21.2,napb,LOC107756672,LOC107667620,LOC107742707,LOC108411873,LOC107593246,LOC103023605,LOC106571745,LOC106610947,LOC100691502
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22085016 ~ 22091782 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219964.1
GCAATGACAGTAATCCCCCGCTGCCATAGTGATAGAGCGCAAGAGTAGCGGCCAGATAAACGAAAAGCGATTTTAGTGTTTATCTGTGCAATTAACCACAGAAATAATGGACAATTCCGGGAAAGAAAAGGAGGCAATTCAGCTTATGGCTGAAGCCGATAAGAAAGTGAAGTCTTCCGGCTCGTTTTTAGGAGGAATGTTTGGAGGAAATCACAAAGTGGAAGAGGCATGCGAGATGTACGCCAGAGCAGCCAACATGTTCAAAATGGCCAAAAACTGGAGTGCTGCAGGCAATGCTTTCTGTCAGGCGGCCAGACTTCACATGCAGCTTCAGAATAAGCACGATTCGGCCACCAGTTACGTCGACGCAGGAAACGCCTTCAAGAAGGCAGATCCACAAGAGGCTATCAAGTGCTTAAACGCAGCCATTGATATTTACACAGACATGGGAAGATTCACCATCGCTGCCAAGCATCACATCACAATCGCTGAGGTGTATGAATCGGAGCTGGTGGACATTGAGAAGGCGATTGCACATTATGAACAAGCCGCGGACTATTACAAAGGAGAGGAATCAAACAGctCTGCAAACAAGTGTCTGCTGAAGGTGGCTTCATACAGCGCTCAGTTGGAGCAGTACCAGAAAGCAATAGAGATTTATGAGCAGGTTGGAACCAACACCATGGACAATCCCCTGCTGAAATACAGCGCCAAAGAGTACTTCTTCAAAGCTTCCTTGTGTCACTTCATCGTAGATGAGCTCAACGCAAAGcTCGCTGTTGGAAAGTATGAAGAGATGTTTCCAGCTTTTTCAGATTCAAGAGAATGCAAGCTTCTGAAGaaacTTCTAGAAGCCCACGAGGAGCAAAACGCAGAGGCTTTCACGGAAGCGGTGAAGGAGTTCGACTCCATCTCACGTTTGGACCAGTGGCTCACCACTATGCTTCTGCGAATCAAGAAGACCATTCAGGGGGACGAAGGCGACCTAAAATGATCTGGACAGTGGGGCGATCACCCACTGCATGGCACCCTTCTCCCCCTTCCATTTCACATCAGTTTTGTGCAATGGCCAAGTCCGGGTTTCCCAAAACAGTATGTCAAAATGTATTGCTGCAACATTTCTAGAGAATATACTTATAAGCCTGTACTGTTACattgatatataatatagcaCATATCAATAATTTAGCACTCCACTTCAAAGATCTGCTCCAGTTTCCCTGTTTTACTCCAAGGGTATTTCTGGAAACATGGGAGCGAACCGAATCAGGAAAGGGAAATTCAAGGATACAATGGGGATTTGAGATGGTCCTTGAGTTCTTTTGCAACGGTCACTGAATTGAGACGTGCTAGATCTGCATGAATTTTACAGATATAATTATTGAGTCAGTGCAGCAGGATcgtataatattattatcattattattattatttagatattgTTTTTATCTGTGCCGTTTTTGTAGTCTGCTCACACTAGTTGGCATGCAGGCCTCAAAACGCAGCTAACATCAGACATTTATGCAGGACCGAGAAAATTTCAGTTTCCCTCAGTACACCATTTTTAATtggtatttaaataattaaaaaaaaaaattgtgtcatACCTGATGGATGTACTTTTTTATCCATTCTTTGAAATGTAACTCTTAGGTTGTTttcttaaatgtgtatttatttcattaaattattatctgAACCGATCATATAATATGAGTCTAataatacatatgcatatatgtatgtgttcaataatattgtattagtaaaaaaacgaaatcatttaacattatatttttacactgtCTATCATCTCCATCAGCACTGAAATGATGCATTTGTAAAGTCCTTGTATAACCTTTATTaacatgctctgtgtgtgtcgTGTTGTGAATGCATAGCTCATGTACACTCTTCACTCCTATGGTCTTTAGCGGCGCATGTCATCTGTGTTCTACGTGTCGTGATGTCTGTGTTTTACCATATTCTAGAGTTTCTAAGAAGCCATGAAGACGTACAGTACCAAACGATGTACTTTCCCACAGAACGACCGATGACTTCGCTGAATGTCTGTGAGaatgtacagaaataaaaaccaaTACTGAAATGGTTCAATTCA
>XM_043219965.1
CTTATGGCTGAAGCCGATAAGAAAGTGAAGTCTTCCGGCTCGTTTTTAGGAGGAATGTTTGGAGGAAATCACAAAGTGGAAGAGGCATGCGAGATGTACGCCAGAGCAGCCAACATGTTCAAAATGGCCAAAAACTGGAGTGCTGCAGGCAATGCTTTCTGTCAGGCGGCCAGACTTCACATGCAGCTTCAGAATAAGCACGATTCGGCCACCAGTTACGTCGACGCAGGAAACGCCTTCAAGAAGGCAGATCCACAAGGGAAGATTCACCATCGCTGCCAAGCATCACATCACAATCGCTGAGGTGTATGAATCGGAGCTGGTGGACATTGAGAAGGCGATTGCACATTATGAACAAGCCGCGGACTATTACAAAGGAGAGGAATCAAACAGctCTGCAAACAAGTGTCTGCTGAAGGTGGCTTCATACAGCGCTCAGTTGGAGCAGTACCAGAAAGCAATAGAGATTTATGAGCAGGTTGGAACCAACACCATGGACAATCCCCTGCTGAAATACAGCGCCAAAGAGTACTTCTTCAAAGCTTCCTTGTGTCACTTCATCGTAGATGAGCTCAACGCAAAGcTCGCTGTTGGAAAGTATGAAGAGATGTTTCCAGCTTTTTCAGATTCAAGAGAATGCAAGCTTCTGAAGaaacTTCTAGAAGCCCACGAGGAGCAAAACGCAGAGGCTTTCACGGAAGCGGTGAAGGAGTTCGACTCCATCTCACGTTTGGACCAGTGGCTCACCACTATGCTTCTGCGAATCAAGAAGACCATTCAGGGGGACGAAGGCGACCTAAAATGATCTGGACAGTGGGGCGATCACCCACTGCATGGCACCCTTCTCCCCCTTCCATTTCACATCAGTTTTGTGCAATGGCCAAGTCCGGGTTTCCCAAAACAGTATGTCAAAATGTATTGCTGCAACATTTCTAGAGAATATACTTATAAGCCTGTACTGTTACattgatatataatatagcaCATATCAATAATTTAGCACTCCACTTCAAAGATCTGCTCCAGTTTCCCTGTTTTACTCCAAGGGTATTTCTGGAAACATGGGAGCGAACCGAATCAGGAAAGGGAAATTCAAGGATACAATGGGGATTTGAGATGGTCCTTGAGTTCTTTTGCAACGGTCACTGAATTGAGACGTGCTAGATCTGCATGAATTTTACAGATATAATTATTGAGTCAGTGCAGCAGGATcgtataatattattatcattattattattatttagatattgTTTTTATCTGTGCCGTTTTTGTAGTCTGCTCACACTAGTTGGCATGCAGGCCTCAAAACGCAGCTAACATCAGACATTTATGCAGGACCGAGAAAATTTCAGTTTCCCTCAGTACACCATTTTTAATtggtatttaaataattaaaaaaaaaaattgtgtcatACCTGATGGATGTACTTTTTTATCCATTCTTTGAAATGTAACTCTTAGGTTGTTttcttaaatgtgtatttatttcattaaattattatctgAACCGATCATATAATATGAGTCTAataatacatatgcatatatgtatgtgttcaataatattgtattagtaaaaaaacgaaatcatttaacattatatttttacactgtCTATCATCTCCATCAGCACTGAAATGATGCATTTGTAAAGTCCTTGTATAACCTTTATTaacatgctctgtgtgtgtcgTGTTGTGAATGCATAGCTCATGTACACTCTTCACTCCTATGGTCTTTAGCGGCGCATGTCATCTGTGTTCTACGTGTCGTGATGTCTGTGTTTTACCATATTCTAGAGTTTCTAAGAAGCCATGAAGACGTACAGTACCAAACGATGTACTTTCCCACAGAACGACCGATGACTTCGCTGAATGTCTGTGAGaatgtacagaaataaaaaccaaTACTGAAATGGTTCAATTCA
>XM_043219966.1
AGCGATTTTAGTGTTTATCTGTGCAATTAACCACAGAAATAATGGACAATTCCGGGAAAGAAAAGGAGGCAATTCAGCTTATGGCTGAAGCCGATAAGAAAGTGAAGTCTTCCGGCTCGTTTTTAGGAGGAATGTTTGGCTGCAGGCAATGCTTTCTGTCAGGCGGCCAGACTTCACATGCAGCTTCAGAATAAGCACGATTCGGCCACCAGTTACGTCGACGCAGGAAACGCCTTCAAGAAGGCAGATCCACAAGGGAAGATTCACCATCGCTGCCAAGCATCACATCACAATCGCTGAGGTGTATGAATCGGAGCTGGTGGACATTGAGAAGGCGATTGCACATTATGAACAAGCCGCGGACTATTACAAAGGAGAGGAATCAAACAGctCTGCAAACAAGTGTCTGCTGAAGGTGGCTTCATACAGCGCTCAGTTGGAGCAGTACCAGAAAGCAATAGAGATTTATGAGCAGGTTGGAACCAACACCATGGACAATCCCCTGCTGAAATACAGCGCCAAAGAGTACTTCTTCAAAGCTTCCTTGTGTCACTTCATCGTAGATGAGCTCAACGCAAAGcTCGCTGTTGGAAAGTATGAAGAGATGTTTCCAGCTTTTTCAGATTCAAGAGAATGCAAGCTTCTGAAGaaacTTCTAGAAGCCCACGAGGAGCAAAACGCAGAGGCTTTCACGGAAGCGGTGAAGGAGTTCGACTCCATCTCACGTTTGGACCAGTGGCTCACCACTATGCTTCTGCGAATCAAGAAGACCATTCAGGGGGACGAAGGCGACCTAAAATGATCTGGACAGTGGGGCGATCACCCACTGCATGGCACCCTTCTCCCCCTTCCATTTCACATCAGTTTTGTGCAATGGCCAAGTCCGGGTTTCCCAAAACAGTATGTCAAAATGTATTGCTGCAACATTTCTAGAGAATATACTTATAAGCCTGTACTGTTACattgatatataatatagcaCATATCAATAATTTAGCACTCCACTTCAAAGATCTGCTCCAGTTTCCCTGTTTTACTCCAAGGGTATTTCTGGAAACATGGGAGCGAACCGAATCAGGAAAGGGAAATTCAAGGATACAATGGGGATTTGAGATGGTCCTTGAGTTCTTTTGCAACGGTCACTGAATTGAGACGTGCTAGATCTGCATGAATTTTACAGATATAATTATTGAGTCAGTGCAGCAGGATcgtataatattattatcattattattattatttagatattgTTTTTATCTGTGCCGTTTTTGTAGTCTGCTCACACTAGTTGGCATGCAGGCCTCAAAACGCAGCTAACATCAGACATTTATGCAGGACCGAGAAAATTTCAGTTTCCCTCAGTACACCATTTTTAATtggtatttaaataattaaaaaaaaaaattgtgtcatACCTGATGGATGTACTTTTTTATCCATTCTTTGAAATGTAACTCTTAGGTTGTTttcttaaatgtgtatttatttcattaaattattatctgAACCGATCATATAATATGAGTCTAataatacatatgcatatatgtatgtgttcaataatattgtattagtaaaaaaacgaaatcatttaacattatatttttacactgtCTATCATCTCCATCAGCACTGAAATGATGCATTTGTAAAGTCCTTGTATAACCTTTATTaacatgctctgtgtgtgtcgTGTTGTGAATGCATAGCTCATGTACACTCTTCACTCCTATGGTCTTTAGCGGCGCATGTCATCTGTGTTCTACGTGTCGTGATGTCTGTGTTTTACCATATTCTAGAGTTTCTAAGAAGCCATGAAGACGTACAGTACCAAACGATGTACTTTCCCACAGAACGACCGATGACTTCGCTGAATGTCTGTGAGaatgtacagaaataaaaaccaaTACTGAAATGGTTCAATTCA

Function

symbol description
napb Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Predicted to be involved in several processes, including SNARE complex disassembly; glutamatergic synaptic transmission; and regulation of receptor internalization. Located in extracellular exosome. Biomarker of Alzheimer's disease and Down syndrome.

NR:

description
PREDICTED: beta-soluble NSF attachment protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219964.1 True 2119 mRNA 0.41 11 22085016 22091782
XM_043219965.1 False 1930 mRNA 0.41 10 22085158 22091782
XM_043219966.1 False 1927 mRNA 0.41 9 22085081 22091782

Neighbor

gene id symbol gene type direction distance location
gpcpd1 gpcpd1,LOC107593247,LOC107742708,LOC107756671,LOC107697181 coding upstream 2399 22067984 ~ 22082617 (+)
trmt6 trmt6,LOC107667616,LOC107697184,LOC107593280 coding upstream 27802 22046439 ~ 22057214 (+)
fermt1 fermt1,LOC107697185,LOC106571740 coding upstream 39470 22032996 ~ 22045546 (+)
LOC122325417 taar12j,LOC107756662,LOC107756663,LOC107550380,LOC107550381,LOC107697080,LOC107697079,LOC107756661,LOC107550395 coding upstream 123647 21960347 ~ 21961369 (+)
LOC122325416 taar12h,LOC107550398,LOC107697080,LOC107756661,LOC107735327,LOC107683198 coding upstream 128982 21955006 ~ 21956034 (+)
trib2 trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179 coding downstream 58654 22150436 ~ 22158928 (+)
LOC122325512 klhl29,LOC107667613,LOC107742703,LOC107697176 coding downstream 193865 22285647 ~ 22394434 (+)
mfsd2b si:dkeyp-115a10.3,mfsd2b,LOC107750078,LOC107697177,LOC107603080,LOC107667608 coding downstream 386279 22478061 ~ 22498608 (+)
mmut mut,LOC107726757,LOC107697172,LOC107726528,LOC107667609 coding downstream 426383 22518165 ~ 22537861 (+)
runx2b runx2b,runx2,LOC107678859,LOC107726745,LOC107697170,LOC107603075 coding downstream 530606 22622388 ~ 22662318 (+)
G140922 NA non-coding upstream 23483 22061063 ~ 22061533 (+)
G140905 NA non-coding upstream 106468 21933984 ~ 21978548 (+)
G140907 NA non-coding upstream 115066 21967698 ~ 21969950 (+)
G140900 NA non-coding upstream 175683 21908974 ~ 21909333 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding upstream 231895 21850862 ~ 21853121 (+)
G140931 NA non-coding downstream 6129 22097911 ~ 22098292 (+)
LOC122324401 NA non-coding downstream 6623 22098405 ~ 22114867 (+)
G140933 NA non-coding downstream 9456 22101238 ~ 22101461 (+)
G141081 NA non-coding downstream 449336 22541118 ~ 22541327 (+)
G141084 NA non-coding downstream 450354 22542136 ~ 22542532 (+)
G140785 NA other upstream 240315 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 883054 21168775 ~ 21201962 (+)
G140533 NA other upstream 982506 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1293313 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1410627 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 379979 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 414945 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 652630 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 751023 22842805 ~ 22860327 (+)
pln NA other downstream 1251933 23343715 ~ 23351655 (+)

Expression


Co-expression Network