bcl11bb (LOC107742200,LOC107678676,LOC107679682,LOC107560207,LOC107555305)


Basic Information

Item Value
gene id bcl11bb
gene name LOC107742200,LOC107678676,LOC107679682,LOC107560207,LOC107555305
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 4849379 ~ 4881627 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220022.1
AATCCCATTCCATTCTTCAGAGgcaaccccacacacacacacacacacacacacacacacacacacacgcacacacacaggcgctGGGTCCTCCCTGAGAGCAGCGTGAACGCGAGACGTAATTGCTCGGGTCCCGATTGATCTGGAGAGGAGGTGTTGTCTTCAGAGGTTGAGCCATTCCGCGCTCTGATGCCAAGCGCACATGGAGGACAGTGCCAAAGACTTCTCTCACCTGGCGAGCACGCCGTCCGCGGATCTTGGATTTCCATTATAGCAGGACAGCGACCGCTTTTAGggctttttaaagaattttaagaCAAGTGTTTTGGAATCGAGGCTGTCGCTGCTGCGGGGGTCGGAGCGGCGTTCGCGCGTCGCTATCTCAGGTTAAGTGGCACTTAGTTGATGCCACACGACAGCCGAACGCCGTTTAGTCTGTTCGCAGAGTACAAGTGTTAGTTCGTGCCGCGATAACGACTAGAACTAGCGCGGTGGAACGGTACCGGGGCCGAGGAGGAAAGTTTCTGGAGCGCGCGCATTAGTCCGAGCGTCCGTGAGATGCTGCTGTAAATGCGGGGCGATGTCCCGACGGAAGCAAGGCAACCCACAGCATCTGTCCCTCACACAGAGGGAGAACCTACCGACTGCAGCAGATCATGACCCGTCGGAGGGCTCCATGGTCAGCCCTGTGGGCGGAGCCGGAGAGAGCGACCTGCTGACCTGCGGTCAATGTCAAACCAACTTCCCCCTGGGAGATATTCTAGTGTTTATCGAGCACAAAAGGAGACTGTGTCCCGGACCCGGCGCCTGTTTCGACAAACCGACGGACTGTGGCGGCTCCCCGGCCCCCAGACCCCCCCGGCCGGAAATCTGCCGGAGGTCTGGACCGGTGGAGGTCGGGATCCAGGTCACGCCcgcagaggaggaggagaaacgACTGACGCCCGCCAGAGGAATCTGCCCCAAGCAGGAGGGCGTCCCAACAGGAAAAGATGAGCCCTCCAGTTACATCTGCACCACTTGTAAGCAGCCCTTTACCAGTGCATGGTTTTTGCTGCAGCATGCACAGAACACCCACGGGATACGCATCTACCTGGACACCCACCCTACTAGCTGTTCGCTTACCCCTCGCATGGCCCTTCCTCCACCACTGGGGGCTGACGCCTTGCCCCGTTCCCCTCTAGCCAGCTTTCTGGGTGATGGTAGCAACCCTTTTCAGCTGCTGCGTATGGGTGCCCCATTGCTACGAGATCCTCCGCCACCCGGATACTTAGAAACCCGATTGCCATCTACCCCGCCCTTTGTAAGCCCTCCACCGCCCCGCCATCCTCTGGAACGCCTTGGCCCTGAGGAGATGGGTCTCCTGTCCCAGCATCCAAGTGCTTTTGAGCGGGTCATGCGGCTGACACCCATGGGCATTGAACCATCCATGGGCTTCTCTCAGCGTCTTCGTGAATTGGCgggcaacaacaacaatggcGGTCCCACTCCCCCTCTTTCACCCAACCGCGTGCCCCCCATGCATCGGCTTCTCAGCCCTACTCTGTTCCAGCCTGGCTCCAAACCCCTACCTTTTCTAACCACACCCCCACAGCCACCATCAGTTCCATCCAGAGGCAATTGCTCACCACCGCTAAATCAGGTGGGCAAAGCCAAGTCCTGTGAGTTCTGCGGCAAGACTTTCAAGTTCCAGAGCAACTTGATCGTGCACAGACGTAGCCACACTGGCGAAAGACCCTATAAGTGTCATCTCTGCGACCATGCATGTTCACAGGCCAGCAAGCTAAAACGCCACATGAAGACGCACATGCACAAGTCAGGCTCCATGGGGAGTTCACCTGAGCAGGGAGGGCAAGATTCGGCTGGAGAGGGGCTTAAGAACAGTGAGGAAAATGGCACGAGGGAAGGATTGGAtaatgaggaggaggaagaagaagaggaggaggaagaagaagaggaggaggaagaagaagaacaacatCAAAATGGAAGCAGGCCTGAATCCAACCTGAGCATGGACTCAGAGTTGAGCAGAAATAGAGAGAATGGCCCAAGACCCTCCCTAGAGGAGAAACGTCTGTCCACTGAAAGAGTGACAGAAAACCAATACAACAACCTCGACAATCACTTGAGACTGCCACCGGGCAGCAGGCCATGCGAGGAGATGGACACCGATTCGGCATCCAGAGAGGCTGACAGAGACAGGGGGCCAATGGTGAATGGCAGAGGCTGTGGCCCGGAGGATCCCATCTCAGCGTTGTTCCACCGGAAGCCAATGCCTATTTCCAGCTCCAGCCTCACTGGGTCTTCCGCCAAGAGGATCAAGATAGAGAAGGATGCGGAGCTGCCACAGGTGCCCGTCATATCCCCTGAAAATGTGTATTCTCAGTTGCTTGCCGGTTATGCTGCATCCCGCCACTTCATAAGGGAGCCCTTCCTGGGTTTTAACGACTCCAGGCAGTCACCTTTCGGCACTTCTTCCGAGCACTCTTCATCGGAGACAGGCAGTCTGCGATTCTCCACCCCTCCAGGGGAAATTCTGGAAGGCGGTGGGATGTCGGGGAGAAGTGGCAGTAGTACACCTCACCTTCAGCTGCGGGGTCCTGGGCCTGGGAGACCACCCAGCTCCAAGGAGAGTCGACGGAGTGACACCTGTGAGTACTGTGGCAAGGTGTTCAAGAACTGCAGTAATCTGACCGTGCATCGGCGCAGCCACACAGGTGAGAGGCCTTACAAGTGTGACCTGTGCAGCTACGCTTGTGCCCAGAGCAGCAAGCTTACCCGGCACATGAAGACCCACGGGCAGTTTGGCAAAGAGGTGTATCGCTGCGATATTTGCCACATGCCCTTCAGCGTGTACAGCACCCTGGAAAAACACATGAAGAAGTGGCATGGAGAGCATTTGCTGACCAATGAGGTCAAACTTGAGCAGGCTGACAGAGCTTGAGATCACTTACCAATGCACTGCATTTTGGGTTTTAGCTGGATAGTCTTTTtcttgactatatatatattttttggagtgatttgattttttttttttttagtgaaaacAAACTGCCACCTGAGAAACAAGAACACAGGGAAATGTTAGTCTGCGGTTCTAAAACCCTTCTTGCATATCCCAGCAACTAACAGAGGAGTAGTCCATTAGGAATTCATGGAGCCTTTCTACTGTGCaataatttctgtatttattggATTATTTGTAATGATACATGGCATGTGCAGGTACATTATCGATGGGTTTCTGCATTCAGTTCCTGAAATTATATTTCTACACCCCATCTTATGATATGACAAATACTGAGATTTTGGCATTCAGCCAGTTTTGTGTTATAAACTAGTTTCCTCAAAGGAAACAAATGGGTAATTTCTAAAAAGAAGAGGTCAGCTTCTAAAAATCGGAGAAAGTTTTCATGCTATTGTTGCTGTCATTGGCCCCACTCATCATGGGTTATATTCAGTAGATAGACGTAAAGCACTGAATGTCACTTTGACAATAAAATATTCAAGGGGCCAAAAACCCAGGGATGTTTAAAGGCAGCTGATAGGCAGTTTGACTGCATCTGAATGATTTTCTGTTGACAACCTTTGAAATGAATgagataaaattaaatgcaagttCATCAACCATGACATTTAGGAGAATGACACcatgcaaaagaaaacaaaaaagatatgTTTCCTCTACATAATAATGGTTCCCGTATATAAACAGTCTTGAGGCTAAGAGTGTTGCATTACTGACATATGTTTTACAAACTAACATGATTTAATGCCCaggttttacttttaaagatcaaaatgtttacatttacttaaattaaaacCCATGCCATTTCTGCCAAATTCATCTATCACTTAATTATAACTGATTGCTTTCCAAACCTTGTACAAGGTCAAATCCTTTCATATGGTGTTATAATATGTAAATTGTGTTTGACTAATTCAGCCTGGTTACAtatcaaatttttattatagGCTCACATGGaggatttttcaaaaatgttgcattccTGTTAAATTATTGTTCATACACAACTCAATCTATCATTGAATCAAAAATGAATTAGCAGCTATTTGGGCACCAAGCACAGGTGCTCACCTGTAGAAATCATTTGAGTAAATagacacatatgcatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcaaagcCATTAAGCTGTAGCAGCATTATATGCACCATCCTGTGCGTTGTTGAAACCGCAATCACTGAATTGTGTTGGGGCTCTCTAGAAGCCCTGGGTGACTGCCTGTCCTCTAAAGGATCCTAGGATTAAATGATTTCCTCATTACGATCTCTGTTCCTCCACACTGAATCGCCTCCACCTGTCTCCTTTCATACATCATCAGCTCAAATTTACACCACAGTCTTCGCCTCCACCCCGCATGCACCACTGTTCTCTATCTGCGCATTCACTATTTACAACATCCTGCCATTTATATTCATGGCTTTctacagtttacattttatttttgacttgAATAGAAAGTTGAATTTAAGCTACGGCTGCACATGTTGCCCGCTCGAAATCAGTCAGCGGGGTACATCGTAAAGAAATGTACAGCACAATAATATgaaccattttttaaatacgGATGTGTAGTTTATCACCTACTTGTCAGATACTTAGCAAACCTCTCTTTGCGTAAATGACAGGAAGTGGCCATAACTTGAAAGAATATCAGGAGGAAATGTGTTGTAGTCAAGAAAGCATGTCGAATTTAAGTGCTACCAATGGCTTTCGGAGACAGGCGTAAGCAGACAACACGGACGTGCCTCAAATTAATATTCAGCCTTTATCTTCTGATGTAGTTCAAACTCCTGCTATACAGCGGACAAAAACAATCCATGAACAAATTATCATAACCAGTATCATTTAAAGTCATTAAGGGGAATCAAAACAAAGTCGTAAAAGATGACTGTTGTAAAGTGTGCTTCATTTTTGAGGGAAAGTTTTAACGCACAGGTTTGAGAAATTACGAAGCCATTtctttactgatttatttagatGGACTAGAAAATTATTGGCAGTggaagtaaaacaaataattggaataaaaaaaaaactatgacactgtctttaaataatgtttacagTGTTGAAGTATAAGGATACTGAGCTCttctgtatatgtgttttaaatgagacaAATGTTTTGTcctctgttttttttacaatattgaaTATCATAGCAGGGTTTTCTCCTCTTTccctttgtttttttccctcccctcCTTTTTTGGTGCAGGTATTTCCGTAAATTTCTATGGATATATGCGCGTGTATGTTTTGTTCATTGTTAAATTCtcaatgtatttgtaatttcagtggcattttatgaaatgatgcaaaaaatctttatattttgcAGTCCATTATGAAATTGTGAGtctattcaaatgttttgtcacTATATCTGTTCATAATTTTGGTAATTCCATCCACAGGAGGatgtaaaaaaatggaaataaaaatgaaaacaaacaagaagataa

Function

NR:

description
PREDICTED: B-cell lymphoma/leukemia 11B-like isoform X1

GO: NA

KEGG:

id description
K22045 BCL11A; B-cell lymphoma/leukemia 11A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220022.1 True 5563 mRNA 0.47 3 4849379 4881627

Neighbor

gene id symbol gene type direction distance location
lgals8a lgals8a,LOC107747965,LOC107678666,LOC107560204,LOC107679690 coding downstream 144071 4695514 ~ 4705308 (-)
tmem242 tmem242,LOC107560201,LOC107678668,LOC107679673,LOC107555301 coding downstream 175231 4668679 ~ 4674148 (-)
trnat-ugu_52 NA coding downstream 399924 4449383 ~ 4449455 (-)
tshr LOC107728338,LOC107549347,LOC107657214,LOC107681439,LOC107742823,LOC107569215 coding downstream 1302175 3537873 ~ 3547204 (-)
LOC122324861 rhob,LOC107730407,LOC107704819,LOC107569216,LOC107549346,LOC107657220,LOC105907285,LOC103025336,LOC106607565 coding downstream 1375974 3471994 ~ 3473405 (-)
LOC122324970 cldn20,LOC107560197,LOC107678665,LOC107555306,LOC107679668,LOC107742202 coding upstream 36180 4917807 ~ 4928160 (-)
LOC122324969 tiam2,LOC107560208,LOC107678678,LOC107742216 coding upstream 47235 4928862 ~ 4966781 (-)
LOC122324828 cnksr3,ipcef1,LOC107560196,LOC107742203,LOC107679663,LOC107678675 coding upstream 91421 4973048 ~ 5010559 (-)
ttc13 ttc13,LOC107679664,LOC106571397 coding upstream 152722 5034349 ~ 5052435 (-)
fam89a fam89a,LOC107727345,LOC107742210,LOC107685750,LOC107679680 coding upstream 179080 5060707 ~ 5064427 (-)
G136069 NA non-coding downstream 112573 4736549 ~ 4736806 (-)
G136012 NA non-coding downstream 403176 4445773 ~ 4446203 (-)
G135975 NA non-coding downstream 413388 4098935 ~ 4435991 (-)
G136175 NA non-coding upstream 136734 5018361 ~ 5018866 (-)
G136176 NA non-coding upstream 151972 5033599 ~ 5033804 (-)
G136180 NA non-coding upstream 209673 5091300 ~ 5097061 (-)
G136188 NA non-coding upstream 230546 5112173 ~ 5119766 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding upstream 770672 5652299 ~ 5652925 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 267282 4564356 ~ 4582097 (-)
LOC122325550 NA other downstream 874121 3968763 ~ 3975258 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other downstream 979313 3638289 ~ 3870066 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other downstream 2091949 2740552 ~ 2757430 (-)
G135548 NA other downstream 2484555 2364053 ~ 2364824 (-)
si:ch73-111k22.3 LOC107742221 other upstream 129754 5011381 ~ 5012580 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other upstream 143179 5024806 ~ 5029567 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other upstream 279579 5161206 ~ 5360069 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other upstream 709711 5591338 ~ 5598666 (-)
G136357 NA other upstream 820052 5701679 ~ 5703911 (-)

Expression


Co-expression Network