bsnd (LOC107697389,LOC107716551,LOC107566144,LOC107687198,LOC107712846,LOC107581515)


Basic Information

Item Value
gene id bsnd
gene name LOC107697389,LOC107716551,LOC107566144,LOC107687198,LOC107712846,LOC107581515
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 9335931 ~ 9339220 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220049.1
TTGACTAAGGCCCATTACAGGTTCAATGATCCGGATCTTGGTTCTCCACTGGCCCCTTGTCCTGTCACTCACTCTCCTGCCCTTCAACTCTATGGGGACACATTTATAAAGCTCCGCTCGCTCACCGATGCTTTCTCTGTGAACTTAATAAACCACTACTGGACTTGTAGGTTTTTTTCCATGGCAGAGAACAAGCCATACCGCTATGGGCTCATCGTTCTGGGAATGGCGTTCGTGGCTTTGGGTCTGTTCACGATTTCTGTAGAGGAGCCACAGGTGTTTGCTACGTTCTGCGCTGCGGGACTCATAATGGTGGTCGTTGGGTCTGTCTGGTCGGTGTGTCAGTGTTACCCCAGGGTGACCGTTATACTGCCAGACAAGGAAGAACTCTGTGGGGCTGAAAAACAGGACTTGAGTGCTGGAAGCGCAGATGAGAAAAGTACAACAAAACCGATAAGAGCTCCCTTGGCTGGCTTCTGTGACGATGAAGTAGAAATATCATCAGATCCAAAGCGACACGCAGAGAGCAGACCCGGCGAGCGCGTTCTCGTCCTCCACACATGTCGAAGTTCTCCCAGCGTTCTGGCCTGCTCCAGCGCTCCCCTGATGGACCCCAGCAGAGAGATGTACTACGGGAGAGTGGAGGACACACGTTATCACACATCTGAGCTGGAGAGTGAATAGCCGGTGCTGACCCTGATGTCCATCTGCATCTGACACCAAACGAGATTGGCCAGACACCTATACTagtcatgcattttttttaaatttgtgtatTAACATCGTATTTTACATTATGCTGTTAAGCATGTGAATGTCACAAGGTCTGGCCATGACTTTGTCAAAAGCGCAAGACAACAGAATCGTTCAGCTCTCAGGGGAGCAAAGCATTAGGTGATTAAATACTTGTGACCTTGACTTCTGTCACCGTGAAGACCAGAGGACACTGAAAGGGGACTCCTTTTCACTGAGCTTTCACAGTCTTTAAACACTACGACAAAGCATAAAGACAAAATGACTATACTGTAGATTCGCTCAAGTTAatttaacagaaatataaatgcatctaGAAGCGTCAGAAAACTTATCAATGAACAAATGTATACGTTCTGTTTGTTTACCTGGACATCTGCAAAGTGGTCTGTAGATATGCTgttgctagtttttttttagttttttttttgccatatccAACTTTTGTAATGAGCTTTGGGTATTTTCTATCCTCTAAACCTAAATATGAGACTTGccaacatttctgcatttttaaatgttcatgcAGACGTGTTTTAGgtcattaaatgaatgaatgaataaataaataactacctATATCTAACTACTCATGTTTATACgatccacagaaaaaaaatatccagtTTTTGAACAACATaggctgaataa

Function

NR:

description
barttin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220049.1 True 1404 mRNA 0.44 3 9335931 9339220

Neighbor

gene id symbol gene type direction distance location
prkaa2 prkaa2,LOC107716554 coding downstream 240567 9078745 ~ 9095364 (-)
LOC122325066 LOC107687338,LOC107597794,LOC107728091,LOC107712844,LOC107581495 coding downstream 744746 8572552 ~ 8591185 (-)
LOC122324856 LOC107733811 coding downstream 927674 8402799 ~ 8408257 (-)
tmed5 tmed5,LOC107733818,LOC107597813,LOC107712842,LOC107581519,LOC108415774 coding downstream 994981 8336607 ~ 8340950 (-)
itpa itpa,LOC107712840 coding downstream 1048686 8284042 ~ 8287245 (-)
si:dkeyp-51f12.3 NA coding upstream 143 9339363 ~ 9355284 (-)
si:dkeyp-51f12.2 si:dkeyp-51f12.2 coding upstream 18188 9357408 ~ 9359541 (-)
ftr85 LOC107697417,LOC107716559,LOC107566153,LOC107712832,LOC107581513,LOC107580448 coding upstream 37829 9377049 ~ 9381993 (-)
igfbp3 LOC107687177,LOC107712886,LOC107581452,LOC107697441,LOC107755684,LOC107559743 coding upstream 124514 9463734 ~ 9477418 (-)
si:ch211-191a24.3 LOC107712889,LOC107687175,LOC107581451,LOC107559742 coding upstream 170446 9509666 ~ 9545061 (-)
G137132 NA non-coding downstream 82961 9252712 ~ 9252970 (-)
LOC122324791 NA non-coding downstream 95234 9222279 ~ 9240697 (-)
G137102 NA non-coding downstream 211188 9118935 ~ 9124743 (-)
G137057 NA non-coding downstream 513750 8821791 ~ 8822181 (-)
G137053 NA non-coding downstream 585133 8750547 ~ 8750798 (-)
G137250 NA non-coding upstream 53730 9392950 ~ 9393229 (-)
G137253 NA non-coding upstream 61162 9400382 ~ 9401209 (-)
G137255 NA non-coding upstream 64910 9404130 ~ 9404541 (-)
G137264 adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833 non-coding upstream 101017 9440237 ~ 9447911 (-)
G137267 LOC107712887,LOC107559744,LOC107755683,LOC107687178,LOC107581453 non-coding upstream 120285 9459505 ~ 9536077 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 870 9325653 ~ 9335061 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other downstream 52548 9255548 ~ 9283383 (-)
G137056 NA other downstream 514212 8821154 ~ 8821719 (-)
G137054 LOC107660256,LOC107566921 other downstream 516604 8818854 ~ 8819327 (-)
pigc pigc,LOC107581520,LOC107669155,LOC107712841,LOC107697628,LOC107597814 other downstream 691172 8323113 ~ 8644759 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other upstream 351904 9691124 ~ 9700538 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other upstream 358442 9697662 ~ 9751383 (-)
G137330 NA other upstream 598745 9937965 ~ 9938877 (-)
G137451 NA other upstream 1228077 10567297 ~ 10570737 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 1382701 10721921 ~ 10724069 (-)

Expression


Co-expression Network