kifap3a (kifap3a,kifap3,LOC107726482,LOC107696146,LOC107698375,LOC107732413,LOC107553501,LOC107599114)


Basic Information

Item Value
gene id kifap3a
gene name kifap3a,kifap3,LOC107726482,LOC107696146,LOC107698375,LOC107732413,LOC107553501,LOC107599114
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17843539 ~ 17861031 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220059.1
TTCAGTACACACCCATAGCAACACAAACAGCAGCATCCTGCCAGAGTAGAAACGATGAAGCAGTCCAGATATTAGATACACGTCAAAACATCAGACGGAAATCAACCTCACAGGTTTATATGCGTTAATTTACGAACAACGATGCAAGGGGACGACGCCAGATATTTAAAGCGGAAATATAAGGGTGGCAGTTTAGATGTCCACCCCACAGAAAAAGCCCTTGTTGTCCAATATGAAGTGGAAGCTACAATCCTGGGAGAGATGGGAGACCCCATGCTAGGAGAACGCAAGGAGTGCCAGAAGATAATCCGTCTGAAAAGCCTGAATTCCAACACGGACATTTCGTCTTTAGCACGGAAGGTAGTGGAGGAGTGTAGACTCATTTCCCCTTCCAGACTTCCTGAGGTGGAACAGTTATTGTTTTATCTGCAGAACCGCAAGAAATCTGCTGaaaagaaagagaagaaacagATCAAGCCAAGAGACCTGACTCCTTTTGAAGGCATGGAgCTTGATGAGGAGGCCAACATTAATAGCATAGATGACTATGTTGAGCTTCTGTATGAGGACATCCCTGAGAAGATCAGAGGAGCTACACTCATCCTCCATTTGGCCCGTAACCCTGACAACCTGGAGGAGTTGCTGCAGAATGAGACTGCTCTGGGCGCGCTGGCCCGGGTCCTGAGAGAAGACTGGAAGCAGAGTGTCGATTTGGCAACCACAATCATCTATGTCTTCTTCTGCTTCTCCAGCTTCTCTCAGTTTCATGGCCTGATCACTCACTACAAGATCGGTGCGCTGTGTATGAGCATAATTGAGCATGAGCTGAAGCGCTATGACCTATGGCAGGACGAATTGCTGAAGAAAAAGAAGGCTGGGGACGATGACCCAGACAATCAGAACCTGAAGAAGGAGTACGAGAAAGCCCTTAAGAAGTACCATGGGCTGCTGACCAAACAGGAACAGCTTCTGAGAGTTGCTCTGTACCTGCTGCTGAATCTGTCTGAGGACACTCGCACAGAGCTGAAGATGAGGAACAAGAACATTGTCCACCTTCTGGTGAAAACGCTGGACAGAGACAGCGAGGAGCTACTGGTGCTGGTAGTGTCCTTCCTCAAGAAACTTAGTATCTTCTTAGAAAATAAGAATGACATGGCTGAGATAGATACAGTGGAGAAACTGGCGAAACTGGTGCCCTGTGAACATGAAGATCTCCTTAATGTAACTCTTCGCCTCCTCCTTAATCTCTCCTTTGACACCGGCCTCCGCAGCAAGATGGTGcaggcagaccttctgcccaaACTCACCTCACTGCTAGgagaCGAAGCGCAGAGACAGATCGCAATGTGCATTCTGTACCACATCAGTATGGACGACCGTTTCAAGTCTATGTTTGCCTACACAGATTGCATTCCACAGgtaatgaaaatgttgtttgatTGTGGTGAGGAGAGGATTGACGCTGAGCTCATTTCTTTCTGCATCAACTTGGCTGCCAACAAGAGGAATGCCCAGATCATGTGTGAAGGCAATGGTCTGAAAATGCTGATGAAGAGAGCGCTGAAGCTTAAAGATCCtctgatgatgaagatgatccGAAATGTATCTCAGCATGATGGACCTTCTAAAAATCTCTTCATTGATTATGTTGGTGACTTGGCGGCTCAGATCGGACTGAAGGAAGAGGAGGAGTTTGTGATTGAGTGCTTGGGAACTCTTTCCAATCTTACCATTCCTGATCTTGACTGGGAACTTGTGCTAAAGGAGTACAACCTGGTGCCTTATCTCAAGGACCACCTCAAACCAGGCTCTGCAGAAGATGACCTCATTCTGGAGGTGGTGATCATGATTGGCACTGTCTCCATGGACGACTCATGTGCTGTAATGTTGGCTAAATCAGGCATCATCCCTGCTCTAATAGAGCTGCTGAATGCCCAGCAAGAAGACGATGAGTTTGTCTGTCAGATTGTGTACGTATTTTACCAGATGGTGTTTCACCAGGCCACCCGAGATGTCATCATAAAAGAAACACAGGCTCCTGCATATTTGATTGACCTGATGCatgataaaaatgcagaaatacgCAAAGTGTGCGACAATACATTGGACATCATTGCTGAATATGATGTGGAGTGGGGCAAGAAGATCCAGAGTGAGAAGTTCCGCTGGCATAACTCTCAGTGGCTGGAGATGGTGGAGAACCGGCAGATGGATGAAGCAGAGCCTTTCATGTATGGAGATGATGGAGAACCTTTTCTCCAAAACGGTGACATCCTGGAACGGCCAGACCTCTTCTACAGTGCAGatggAATAATCCCAGCAGATGGTGCCATCAGTCCAGAGTTCTTCACAGACTTCCAGAACGGAGACCTGTTAGTACCACAGGGTTTCCCCAGCagTTCTTTGACAGACGGCTACGGACAGACCGCTGTGTCTCCAGCACGTCCTGCCACGGCTTACGGCTTTCGGCCTGACGAGCAGTTTTATTATGGTTACACGGCCTCACGGTAGGAGAGTGTCAGGAAAGACCTAAAGCCTATTAAAAACCAATTAAATGGTTCTCAAAAGATGCTAGTTAGGTCTCTTCACCATTTCGAATGAAAGCTACACTACTGGTTTTTTTCATCATCAGTATTTCTTTCTATGTAATATGTGCGTATTTATTACATTCCGTGTGAATCTCAGTCTGAATGTGTTTTAAGATGAATGTTCGCAATGAAGCTATAATCTGCAGCCCTCACTCTTGAGCTCCATCATGTAGTTTGATCATATCTACTTTAGCCTACTGTGTATTGCTTGTCAACACCGAAGAAACTAATGGCACAACATTGCCTTTATTGTGCAATATAATGAAAGTAGGAGGTTAGTTGCATGCTGTTTCAGTGATGTAGGTGAGTTAAGTTACGTTGAAAACatctatttatacattaaagCAAATCCGTTTAATGCATGACAGTTGTTTAGGTTTCTGGAAGCAAAATATTGTGTAGCTTTAGCTGCAACTCATGTACTTATAGTTGATAATCAGTCATTGTCATCCATAAAAGGATTTCCTTCAGTTTTACATATGTTTACATAAAGCAACTGATCTGGTCAGTTTAATGACTCACATGAAGtaacatattttgttaaaatccaTTTCATACATGACAACACAGCACAGTACACATGGTAACAAAAATACCACTTTACAGTCTTAACATCCACTCACTAATGTGATTGTGCAAAACATTGTGGCCTGTTTCTTTGCTTTTGATACCGTAGTACCAGTTTTATGACGCTTCTTGGCTTGGTGCACTGCTAACGGCTTcatatgtattttgtaatgtaGCCAAACAAAGTGTTCTTTTGAAATAATACTGGTCTCTTTATGTGCGTTTTAGTATTTATGAAACTCAATTTCATTGGTGCCTGGGACTTGTCttaattactgttttatataaaatgcctttttatttaatgtggtgcaatatgaaatacataaattgATGTGAAAAAGC

Function

symbol description
kifap3a Predicted to enable kinesin binding activity. Predicted to be involved in cilium organization and microtubule-based movement. Predicted to be part of kinesin II complex. Predicted to be active in axoneme and ciliary transition zone. Orthologous to human KIFAP3 (kinesin associated protein 3).
kifap3 Enables kinesin binding activity and protein phosphatase binding activity. Predicted to be involved in cilium organization and microtubule-based movement. Predicted to act upstream of or within several processes, including negative regulation of apoptotic process; negative regulation of cell population proliferation; and positive regulation of calcium-dependent cell-cell adhesion. Located in centrosome and condensed nuclear chromosome. Part of kinesin II complex. Colocalizes with spindle microtubule.

NR:

description
PREDICTED: kinesin-associated protein 3

GO:

id name namespace
GO:0005871 kinesin complex cellular_component
GO:0019894 kinesin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220059.1 True 3500 mRNA 0.44 20 17843539 17861031

Neighbor

gene id symbol gene type direction distance location
hmcn1 hmcn1,LOC107732365,LOC107698379,LOC107726475,LOC107696172,LOC107553432 coding downstream 70798 17704918 ~ 17772741 (-)
ptgs2b ptgs2b,LOC107732418,LOC107698381,LOC107553505,LOC107599092,LOC107726413,LOC107696154 coding downstream 160584 17679203 ~ 17682955 (-)
pdcb pdcb,LOC107553506,LOC107698383,LOC107732392,LOC107726497,LOC107696164,LOC107599093 coding downstream 177173 17663502 ~ 17666366 (-)
tprb LOC107732389,LOC107553507,LOC107696139,LOC107599094 coding downstream 181475 17644978 ~ 17662064 (-)
scyl3 scyl3,LOC107698387,LOC107726436,LOC107599096,LOC107732421,LOC107553510,LOC107696147 coding downstream 207683 17629431 ~ 17635856 (-)
slc25a24 slc25a24,LOC107553450,LOC107732372,LOC107698372,LOC107726490,LOC107696157,LOC107599083 coding upstream 106065 17967096 ~ 17975299 (-)
si:ch211-63o20.7 si:ch211-63o20.7,LOC107732427,LOC107726431,LOC107698369,LOC107599081,LOC108439852 coding upstream 128281 17989312 ~ 17995262 (-)
znf395b LOC107698366,LOC107553496,LOC107732419,LOC107696161 coding upstream 146915 18007946 ~ 18013527 (-)
LOC122325023 LOC107553448,LOC107732384,LOC107726442,LOC107599077,LOC107696167 coding upstream 153421 18014452 ~ 18017360 (-)
paqr8 paqr8,LOC107698331,LOC107732380,LOC107553447 coding upstream 157188 18018219 ~ 18021576 (-)
G139567 ivns1abpa,LOC107696153,LOC107726450,LOC107732388,LOC107553504,LOC107683098,LOC107599089 non-coding downstream 43673 17795484 ~ 17799866 (-)
G139565 NA non-coding downstream 49467 17789198 ~ 17794072 (-)
G139387 NA non-coding downstream 227031 17615793 ~ 17616508 (-)
G139386 NA non-coding downstream 227840 17615148 ~ 17615699 (-)
LOC122324574 NA non-coding downstream 284069 17555855 ~ 17559470 (-)
G139590 NA non-coding upstream 27537 17888568 ~ 18180187 (-)
LOC122324448 NA non-coding upstream 32705 17893736 ~ 17907615 (-)
G139591 NA non-coding upstream 226181 18087212 ~ 18107403 (-)
G139651 LOC107696185,LOC107553490,LOC107698357,LOC107719095 non-coding upstream 295770 18156801 ~ 18157647 (-)
G139653 NA non-coding upstream 305095 18166126 ~ 18166731 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other downstream 19338 17801402 ~ 17824201 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 415416 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1381323 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 1476740 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1738812 16017318 ~ 16104727 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 482432 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 544996 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 1393703 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 1400435 19261466 ~ 19262952 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other upstream 1437203 19298234 ~ 19303968 (-)

Expression


Co-expression Network