LOC122325154 (taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440)


Basic Information

Item Value
gene id LOC122325154
gene name taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21914643 ~ 21915653 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220067.1
ATGGATGTCCAAATCAACATTAGCCAAAATGGAATCTGGGAAAAGCATTTTCTGTGTTATGAGTTTAGTAACATGTCTTGTCAGAGATTTATCTATCCTTTGGAAACCCGAATATTGCTCTACATCCTTTTCAGCATTTCATCAATTGTCACAATCCTAGGAAACCTGCTTGTGATCATAACGGTTATTCACTTCAAGCAGCTTCACACACCGACTAACTACCTCATCCTGTCTCTGGCTGTGGTCGATCTGCTTGTCGGAGGAGTTGTGATGCCTCCCAGCATGCTGCGCTCCATCGAGACGTGCTGGTATCTGGGAGATTTGTTCTGTAAAATACACAGCAGTCTTGATATAACGTTGTGCACTGCATCTATTTTAAACCTGTGTATCATTTCTCTGGACAGATACTATGCCATATGTCACCCCTTTCAATATCACAGTAAAATGACATCTCTTGCTACACTAGttatgattattatctgctGGACTGTTTCAGCTGCTCTGGGGTTTGGCATGATCTTCATGGAGCTTAATATTCTGGGCATTGAggatttttattatgaaaatgttgaCTGTGATGGAAAATGCATAGTGTTTCATAGCAAAGAGGCAGCTACTGTAATGTCATTGGCTTGTTTTTACGTTCCTGCTTTTGTCATGCTCTGTGTGTATCTTAAGATCTTACACGCAGCTCAACTGCAGGTTCAGGCCATTCAGAGTGTgaattctgaatttaaaaaagagGGGAAAGCCACTAAGACTTTAGCCATTGTCATGGGGGTGTTTCTGACCTTCTGGATAcccttttttatttgcaatctTCTTGATCCCTACATTGGTTACTCTGTACCACCACTGCTGTTTGACTTGTTCCTGTGGGTTGGATATTATAATTCCACCTGTAATCCCATAGTGTACGCCTTCTTTTACAGCTGGTTCAGACATGCTTTCAGAGTCATTCTGTCTGGAAGAATATTTCAGAGTAATTCTTCAAGAATAATGTTATTGTAA

Function

symbol description
taar10a Enables G protein-coupled serotonin receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR1 (trace amine associated receptor 1).
taar10c Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR1 (trace amine associated receptor 1).
taar10d Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR1 (trace amine associated receptor 1).
taar10b Enables trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR1 (trace amine associated receptor 1).

NR:

description
trace amine-associated receptor 10b

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001594 trace-amine receptor activity molecular_function

KEGG:

id description
K05051 TAAR; trace amine associated receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220067.1 True 1011 mRNA 0.40 1 21914643 21915653

Neighbor

gene id symbol gene type direction distance location
LOC122325217 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding upstream 3232 21910401 ~ 21911411 (+)
LOC122325159 taar10b,taar10c,taar10d,taar10a,LOC107719439,LOC107550391,LOC107697107,LOC107697105,LOC107550394 coding upstream 13815 21899772 ~ 21900828 (+)
taar10a taar10a,taar10b,taar10d,taar10c,LOC107719440,LOC107697108,LOC107550390,LOC107719439,LOC107697105,LOC107697107 coding upstream 16682 21896951 ~ 21897961 (+)
taar10 LOC107697082,LOC107550377,LOC107719389 coding upstream 23449 21890151 ~ 21891194 (+)
bmf2 LOC107550420,LOC107593255,LOC107719427,LOC107685367 coding upstream 90524 21817203 ~ 21824119 (+)
taar1b LOC107733378,LOC107697104,LOC107550379 coding downstream 4642 21920295 ~ 21922335 (+)
LOC122325331 taar12i,taar12j,LOC107733377,LOC107550395,LOC107756662,LOC107756663,LOC107550380,LOC107697080,LOC107550381 coding downstream 8503 21924156 ~ 21925178 (+)
LOC122325361 taar12c,LOC107697103,LOC107706946,LOC107550397,LOC107550396 coding downstream 11043 21926696 ~ 21927715 (+)
LOC122325420 LOC107550396,LOC107721014,LOC107706946 coding downstream 15674 21931327 ~ 21932340 (+)
LOC122325418 taar12f,taar12c,LOC107697103,LOC107706946,LOC107550396,LOC107550397 coding downstream 28317 21943970 ~ 21944989 (+)
G140900 NA non-coding upstream 5310 21908974 ~ 21909333 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding upstream 61522 21850862 ~ 21853121 (+)
G140792 NA non-coding upstream 64508 21849762 ~ 21850135 (+)
G140788 NA non-coding upstream 67622 21846814 ~ 21847021 (+)
G140786 NA non-coding upstream 69190 21844833 ~ 21845453 (+)
G140905 NA non-coding downstream 18331 21933984 ~ 21978548 (+)
G140907 NA non-coding downstream 52045 21967698 ~ 21969950 (+)
G140922 NA non-coding downstream 145410 22061063 ~ 22061533 (+)
G140931 NA non-coding downstream 182258 22097911 ~ 22098292 (+)
LOC122324401 NA non-coding downstream 182752 22098405 ~ 22114867 (+)
G140785 NA other upstream 69942 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 712681 21168775 ~ 21201962 (+)
G140533 NA other upstream 812133 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1122940 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1240254 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 556108 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 591074 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 828759 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 927152 22842805 ~ 22860327 (+)
pln NA other downstream 1428062 23343715 ~ 23351655 (+)

Expression


Co-expression Network