zmp:0000001074 (LOC107559725,LOC107656729)


Basic Information

Item Value
gene id zmp:0000001074
gene name LOC107559725,LOC107656729
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 9701899 ~ 9711474 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220090.1
CAAAAGTAGTGTCAGTTTGATAAGGTCTCTCACTCTTTTCTAGAAGATGTTCCCACGCACTTCGCTGGCTCTGACCTTGCTGCTGTTCCTCGCTGTGCAGatcCTGAGCACCGGATACTGCCGGACGGGTTCACGGAAGCAACGTCATAAAAGGGAATGGGTCGTTCCCGCCAAAcgctttacagaaaatgtagaCTACAGTTATCTGCACTATGTCGGCAAGATCCGATCAGACAACGATGACAAGATAATGCTGCACTACACTTTAAGAGGACCAGGAGCCAACCAGCCACCTGTTGGTTACTTTGTAGTAGACACTTACAAAGGATTTGTTCGCATTACACGGCCCCTGGATCGTGAGGAAAGACAATACTACACCCTTATCGGCACTGCATGGCATGCTAACAACACCATAGCTGaagataatattaaaatcaacattatTGTGGAGGACCAGAATGATAACCCGCCGGTTTTCATCAAGCCAGAACGAAGCAGTGTTTATGAGGGCAGCCCAGTTGGTACCTTTGTAACACAAGTTGTGGCCAAAGATGCAGATGAGCCAAACACTCTTCATACTAAGATAGCATACAGCTTGATCAAGCAAGAGCCGAACAATGGCCAGCTTTTCTTTGCTGTTGATAAAGACAATGGAAAAATCTCTGTGAGCAACCCAACACTCGACAGAGAGCAACACAGGTCTTTTGTTCTCACGGTGCAAGCTGCTGACATGTATGGAAGTCCTGAAGGAAATTCTGCTACAGCTACTGTATTTATAGATATCCTGGATGTCAATGACAATGTTCCTACTTTGGAGAAGGATGAGTTTTCAGCAAGTATTGATGAGAATGAGGCACCTGTTGAGGTTTTGAGGATCCAGGCTCTGGATAACGATGAAGAAATGTCAGACAATTGGTTGGCCGAGTTTGAAATAGTCTCGGGGAACGAGGATGGACGTTTCTCTATTGAAACTAATTCGAAGACAAATATGGGTGTTTTGTACCTGAACAAGCCTGTTGACTTTGAGTCAGCATCTGATATGAAGCTGAATCTAGTTGTTGCAAACAAAGCCCCTCCAGGAGCACCTCTAGTGAGTGGAGcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagGTGCAGGTGCAGGTGCAGGTGGAGCATCTGGAGCAGGTGGCCAACATATGTTTAATGGAGGAAACTCCAGTGTGCTCAAGCAAAAGAAATACTTAGTAAATGTCAGTGTCAAAAACAAACCAGAGGCCCCAAAGTTCAAGCCAAAGATCAAGCCTATATCTGTATCTGAAAACACCAAAAATTCTTTTCCAAGAGTAATTGACACCTACACTGCTACAGAAGAAGACACGGGCAAAACTGCAGAAAAAGTCAAATATGCAAAGGGATATGACCCTGACAACTGGATTTCTATTGACATGAATACAGCTGAGATAAAGTTGAACAAGGTACCAGATCGTGAGTCTCCTTTTGTGGTAAATGGGACCTACTATGCCAAGATCCTCTGCATTACAGATGAACTGCATGCTCAGACGTCTACGGGGACTATAGCTTTGCAAGTAGAGGACCTGAATGATAACTGCCCAAAACTCCTTGATAGTGTGCAGACTGTCTGCAGGGATGCCAGAGTGGTCAATGTCACAGCAGCAGATGAAGATTCAGATCCCAACGGAGCTCCGCTAGAGTTCAGATTGATACAAGAGAAGACAAAGGGCAAATGGAATCTCCAGCAAATAAATGATGTAAGTGTTTCACTGCACGCTGAAGATGACTTATGGCCTGGTTTTTATGAAGTTACCATGGAGATCAGAGACAAGCAAGGACTGGCCTGCCCCGATAAGCAAGTCCTCCATTTAGAAGTCTGCACTTGCTCTGAAGGAACGTTTTGTGTTTCAAAAGTGGCAGGCGTACGCACTACATCAGCCAACTTTGGAGCAGCAGGAATTAGTTTCCTAATTCTAGGATTCCTCTGCCTCATCGTGTCGCTTATGGCTATAATGCAATGTGAATGTGGGAATCatggaaaaacatttattgaaatgcCATTTGAAACAAAGCAACATCTTATCACATATTGCACAGAAGAAAAAGTAACATATGGGGGTGATCTTATGATGAGCATGCCACCAAAACTCCACAATGAAGGCAGCAATGACATTAAATTATCCAAAGAACCTTTAAGAATGATGGAAGCTGATTCTAATATCCCAGTGAATGAAACTCAGGCTGTAAACCAGGCTGTAAATAACAGTCCTAAAATGGTTGGAATGATGCAGAAGAGTGTATTTGGAGGCTATTACTATGACATAAATGTGGAAAACTCTGCAAGGTGGAAGGAACAACAAATCTCACTCGACTCATTACTAAAACAATACCTTGCACatAAATCCAGTTATATATCAGAGAATGATTCTCCAAAGCAAGGACTGAAGCACTATGATTATGAAGGTGAAGGATCTGTTACAGGTTCAAATGACAGCCTCAGCTTCATTGAGTCTAATGATGATCTGGAGTTCTTGAACAACCTGGGTTCAAAGTTCAACACCTTGGCTGAGGTGTGTGGATTCAGACAGACTGACCCAAAAGTTATTGTTAATACTGTTGAGACAACACCAAACACAGCTGCAACTTCCAGTCACGTGACCAACATTGTCCAGCCCAGTCCAGAAGAGATACCTGTTAAATCACCCCTTGTCCAATCCAAACCTAATCAGGGGATTTTTGTACAGGAACCTATGTACTATGGATTCAACCAGCCAGTGGCAAGCAGTGTTTTGCTGTCAGAGGATGGGCTTGGGCAAGGTTTGTACATAATTAATGGAACTCCAGAAGCTGGGAGTATTCAGACTCAAGGTAACAGTCATATACTTGCATATTTAAGTAGTGGACAACAGGCTGTTCTAGCAAACAACACCATTGGCGATTCAGTCTTGTACTCAAATATTGTACCTCAGAGTCCGATCATGGTTACTGAAAGTTTAGGGGAAGTTAATTCTGTTGTCATTCAGAATGTTTCACCAACTGCAAACCTTGTAATGATGGCACAGCAACAATTAGATGGAATCGGTTCATTGCAGTTGTTAAGAGATAACGTGCAGGGTAGAGTAACTCTTATTGATGGTTCAGCAAATGAAGGCAAAGTATTTGTTGCAGGTCTAAGTCCAAGTCATCATCCCTTGAGCCCTCAACTTCTTTACCCAGTAAGTTCTCAAGAGTTGAGTGGAATGGTACATATGAACCAAACAGTGATTGATGGCTCCCTTTCCAGTGCACAGAATAAAGGGACAGTAACAATTATAGAAAGTCCTGTCaatgaaagcaatgttttgaCTGGAGGCCCAGGAACTCCAAACATAGTGAGACTGCCTCAAGCTCCAACAGGACAGGTTAATAAAAGTGAGCTATTAGTAAATGGTGTTCAGAACATTGTATCAGGGAAAGGTGGACAGAGCAGACCATTGGTTAGTGGTCCCATAATTCTAGAGGGTTCAAGCCAGCTCCCACTTGTCCAGTAGTCTAGTGGAACTTCCTCAGGCAGCAAACAGACAGTTATTTCGTTCTACATCGTCCAAAGTTAGAACTTCATGAAGCCAAAATCCAAAGAACTTACAACAAATGGGCAGATGAACGTTAAGCAGTAATCTAATTTTCGGTTTAGAGTCAGTAATACCTTATTCATTCCCAGGATTGGATTGTTCACAGAGGAGCACTAATTTAAGCATTAGATGAGTTATTAgtatgcaatattaaaatgaaacaataagtGAGTAtgagctttttatatatatatatttatatatattttgcattttttaatatctacTTGGCCTAGGTGCTTTGAACCTATTTCAAGACCGATATTGTTAAACATGTTGCAGTTTGTGTTACATCTTAAATCTACTGATAAGATTTCAAGGAAAACCTTAACACATTGACGTACATTGTAtacaacaataaataacttgattaaagattacatgatttaaaatgaacaaaaaaggtACACTCTGATTATGTAGTGTTCtaaagcttttatttctgtaaattcTGTAATCAAATTTTATCATATGTAATTgtgttgattattattaatcagtTCAGTCACATAATTCCATAGACTTCCATTATATTAGCATTATGGTGAACAACAGTCAATCTTATGTGAATGtacaactgttttaatattctGGTTTAATATTCTGTGAATAAAAACTTGTTAAGTTAATGTTAGGTTTTGTGGGGGGTTTTATGgcaatgatgtttttttcttttctttttttcggtAGTTTCAACAGTTTCAAAAATACATGTGGTGTTTTGCTCTAAATAAAGTTGAAAATGACTAAAGAACA

Function

NR:

description
PREDICTED: desmoglein-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220090.1 True 4384 mRNA 0.41 14 9701899 9711474

Neighbor

gene id symbol gene type direction distance location
ttr ttr,LOC107712897,LOC107588917,LOC107687167,LOC107712388,LOC107656732,LOC107559732 coding downstream 17987 9680846 ~ 9683912 (-)
LOC122325172 NA coding downstream 36100 9659140 ~ 9665799 (-)
LOC122325171 NA coding downstream 43206 9655671 ~ 9658693 (-)
LOC122325177 LOC107712849,LOC107687193 coding downstream 118249 9579907 ~ 9583650 (-)
mep1ba mep1b,LOC107581508,LOC107687173,LOC107581493 coding downstream 126225 9555458 ~ 9575674 (-)
dsg2.1 dsg2.1,LOC107687165,LOC107745992,LOC107588893,LOC107559724,LOC107712898 coding upstream 1793 9713267 ~ 9725416 (-)
LOC122325472 dhcr24,LOC107687183,LOC107581458,LOC107566150 coding upstream 272048 9983522 ~ 9985904 (-)
psma8 psma8,LOC103029839,LOC100304914,LOC107572146,LOC107723426 coding upstream 747717 10459191 ~ 10462437 (-)
gpr132b LOC107561042,LOC107723405,LOC107701477,LOC107684800,LOC107746348,LOC107572145 coding upstream 766215 10477689 ~ 10484360 (-)
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516,LOC107572140 coding upstream 773032 10484506 ~ 10493235 (-)
G137267 LOC107712887,LOC107559744,LOC107755683,LOC107687178,LOC107581453 non-coding downstream 165822 9459505 ~ 9536077 (-)
G137264 adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833 non-coding downstream 253988 9440237 ~ 9447911 (-)
G137255 NA non-coding downstream 297358 9404130 ~ 9404541 (-)
G137253 NA non-coding downstream 300690 9400382 ~ 9401209 (-)
G137250 NA non-coding downstream 308670 9392950 ~ 9393229 (-)
G137346 NA non-coding upstream 496600 10208074 ~ 10208585 (-)
G137348 NA non-coding upstream 520550 10232024 ~ 10235306 (-)
G137356 NA non-coding upstream 566465 10277939 ~ 10278186 (-)
G137441 NA non-coding upstream 746779 10458253 ~ 10458790 (-)
G137448 NA non-coding upstream 845271 10556745 ~ 10562461 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other downstream 1361 9691124 ~ 9700538 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 366838 9325653 ~ 9335061 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other downstream 418516 9255548 ~ 9283383 (-)
G137056 NA other downstream 880180 8821154 ~ 8821719 (-)
G137054 LOC107660256,LOC107566921 other downstream 882572 8818854 ~ 8819327 (-)
G137330 NA other upstream 226491 9937965 ~ 9938877 (-)
G137451 NA other upstream 855823 10567297 ~ 10570737 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 1010447 10721921 ~ 10724069 (-)
LOC122324412 nme6,LOC107589089,LOC107697297,LOC107723520 other upstream 1419950 11131424 ~ 11136612 (-)
LOC122325476 cdh2,-,cdh4,LOC107561048,LOC107746014,LOC107571545,LOC107701519,LOC107684812,LOC108416271,LOC107656023,LOC107590155,LOC107728629,LOC107739294,LOC107553647 other upstream 1430471 11141945 ~ 11182183 (-)

Expression


Co-expression Network