LOC122325177 (LOC107712849,LOC107687193)


Basic Information

Item Value
gene id LOC122325177
gene name LOC107712849,LOC107687193
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 9579907 ~ 9583650 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220123.1
CATAACACACTCCCTCTTCGTGACCATAAGGAAGCGCCTTCGAGCGACACGAGCAGAAAGTAATCAGAAGAGACTGGACAGACAGACCGAACAGCAGAGGATCTGACATGTCCGCTTCAGAGGAAGAGTGTCCTGTGTGCAGGGAAAGCATACAGAATCCTTCTCAACCGTCTCCATGCTGTGGGAAAGTAATTTGCCAGCGGTGCCTCAGTCAGTCCCTCAGGTACAGGGCTCATTGTCCACACTGCAGAAGCTCAGTAAACCACCCTGATCATGCAAATAATCCACTCCCAccTCGTGATAGTTACGTGCAGCCAATGCTTCCAGGGGACATTCAATTTAATTCGAGAAGACTTGTTGGCGCAAGCATACAGACTCGCCTCAGCCAACTTCGAGATTCGCTGGTTCAGCAAGCAGACGCCGCCCCTCGAGCCAGTCCACCCAATCAGGTTGCAATGCCACTCGCCCCACAAATTCAAGCCCCTCCCCCTTTAATTTTCTCAGCACGGCCTCGGCTCAGACCTCCACTCGCGAATCTAATTGCCGCCCCACAACTTGCACCCATTAATGCTGCACCGAGTGGTTTTGTCCAAGTCCTGCCACCTCCTGCCCCAGCTCCACTGCTGCTAAACCCCGCCCCCTTCCAGGATAATATGCAGGCTGAGCTGGATGAATGGCCGTGGCAAACGGAGATCAATCTAATGGCGATGAATCCACAACCTCAGGGtacAACTGTGAGGACTTTTGCGTGTCCGTACTGCCAGGAGAATGGACTGGATGAGCTCGATCTACGCGATCACTGCAATGAACATCATGTCAACGACAGCAAACGAGTGGTGTGTCCAGTGTGCGTGCAGACTCCTCACGGGGATCCACAGTACTACAGCCGCAACTTCATTGGCCACCTCAACCTGCGCCACTGCTACTATCTGGACGATATAACCAATCTCACCCAGACTGATGAGATGAACATTCAGTGTGCAATCCTTGCATCATATAGGGACCATTTTTAGACCTCGTTTTCAGATGACGACAACATTTTCAGCGATATTCTTGGACAGCTTTCTTTTCTTGGGAACACCATTCTGAAACGGAAAGGATATAAACAATTGAGAAATCAGTCAAAGAAATGGTATATCAAGGATGTGACATTTTTCCGaatgttatgtaaaatataatgtgtGAATGTGCTGGACCTTTTTGATTAAAACGATTTTAAGGTAACAGAACATGCTTGATTATCTGATTAagagatattttaaaaggttcGATGCATCTCAGGTATTGATCGTGCCTTTAAAATGACTAGTAATGATTTATCCGCCAAAAACGTTTTGCACAATTTAGCTCTTCTTGCACTTTCTTTTCAGATAAAAGGTTTATTGCATGTAGTTTACAGTTATGTTTGTGGTACTGTTTGTGggaaaaatgtttgaatgaatTGTTCAAGCCATATCTAGCTCTGTAAACCTATTTATGCTGCACtccaatgtaaataaaaaaaattgccaaaaaacgttttaataCAATAATCTACTGGGAAAATACCATTTTTCATCACTGCAGAAAATGTatgcgatttaaaaaaaaatttcatccagCAATAAAAACGTCCAGAAAATGTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107712849

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220123.1 True 1625 mRNA 0.45 8 9579907 9583650

Neighbor

gene id symbol gene type direction distance location
mep1ba mep1b,LOC107581508,LOC107687173,LOC107581493 coding downstream 4233 9555458 ~ 9575674 (-)
si:ch211-191a24.4 LOC107687195,LOC107712891,LOC107581511,LOC107697473,LOC107559734,LOC107712379 coding downstream 29705 9545841 ~ 9550202 (-)
si:ch211-191a24.3 LOC107712889,LOC107687175,LOC107581451,LOC107559742 coding downstream 34846 9509666 ~ 9545061 (-)
igfbp3 LOC107687177,LOC107712886,LOC107581452,LOC107697441,LOC107755684,LOC107559743 coding downstream 102489 9463734 ~ 9477418 (-)
ftr85 LOC107697417,LOC107716559,LOC107566153,LOC107712832,LOC107581513,LOC107580448 coding downstream 197914 9377049 ~ 9381993 (-)
LOC122325171 NA coding upstream 72021 9655671 ~ 9658693 (-)
LOC122325172 NA coding upstream 75490 9659140 ~ 9665799 (-)
ttr ttr,LOC107712897,LOC107588917,LOC107687167,LOC107712388,LOC107656732,LOC107559732 coding upstream 97196 9680846 ~ 9683912 (-)
zmp:0000001074 LOC107559725,LOC107656729 coding upstream 118249 9701899 ~ 9711474 (-)
dsg2.1 dsg2.1,LOC107687165,LOC107745992,LOC107588893,LOC107559724,LOC107712898 coding upstream 129617 9713267 ~ 9725416 (-)
G137267 LOC107712887,LOC107559744,LOC107755683,LOC107687178,LOC107581453 non-coding downstream 43830 9459505 ~ 9536077 (-)
G137264 adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833 non-coding downstream 131996 9440237 ~ 9447911 (-)
G137255 NA non-coding downstream 175366 9404130 ~ 9404541 (-)
G137253 NA non-coding downstream 178698 9400382 ~ 9401209 (-)
G137250 NA non-coding downstream 186678 9392950 ~ 9393229 (-)
G137346 NA non-coding upstream 624424 10208074 ~ 10208585 (-)
G137348 NA non-coding upstream 648374 10232024 ~ 10235306 (-)
G137356 NA non-coding upstream 694289 10277939 ~ 10278186 (-)
G137441 NA non-coding upstream 874603 10458253 ~ 10458790 (-)
G137448 NA non-coding upstream 973095 10556745 ~ 10562461 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 244846 9325653 ~ 9335061 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other downstream 296524 9255548 ~ 9283383 (-)
G137056 NA other downstream 758188 8821154 ~ 8821719 (-)
G137054 LOC107660256,LOC107566921 other downstream 760580 8818854 ~ 8819327 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other downstream 978952 8591692 ~ 8600955 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other upstream 107474 9691124 ~ 9700538 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other upstream 114012 9697662 ~ 9751383 (-)
G137330 NA other upstream 354315 9937965 ~ 9938877 (-)
G137451 NA other upstream 983647 10567297 ~ 10570737 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 1138271 10721921 ~ 10724069 (-)

Expression


Co-expression Network