Item | Value |
---|---|
gene id | CI01000001_10604980_10633286 |
gene name | KMT2D |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000001 |
NCBI id | null |
chromosome length | 13537560 |
location | 10603888 ~ 10633540 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
kmt2d | Predicted to enable histone binding activity; histone methyltransferase activity (H3-K4 specific); and transcription coactivator activity. Acts upstream of or within animal organ development and convergent extension involved in gastrulation. Predicted to be located in nucleus. Predicted to be part of MLL3/4 complex. Used to study Kabuki syndrome. Human ortholog(s) of this gene implicated in Kabuki syndrome and esophagus squamous cell carcinoma. Orthologous to human KMT2D (lysine methyltransferase 2D). |
id | name | namespace |
---|---|---|
GO:0018024 | histone-lysine N-methyltransferase activity | molecular_function |
id | description |
---|---|
K09187 | MLL2, ALR; [histone H3]-lysine4 N-trimethyltransferase MLL2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000001_10604980_10633286.mRNA | True | 16079 | mRNA | 0.50 | 53 | 10603888 | 10633540 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000001_10590766_10595793 | DHH | coding | upstream | 7650 | 10590436 ~ 10596238 (+) |
CI01000001_10582439_10582802 | NA | coding | upstream | 21067 | 10582378 ~ 10582821 (+) |
CI01000001_10573770_10582123 | LMBR1L | coding | upstream | 21650 | 10573770 ~ 10582238 (+) |
CI01000001_10538498_10539667 | RPS26 | coding | upstream | 64186 | 10538388 ~ 10539846 (+) |
CI01000001_10525795_10530510 | WNT1 | coding | upstream | 73345 | 10523262 ~ 10530543 (+) |
CI01000001_10688354_10691353 | NA | coding | downstream | 54322 | 10687862 ~ 10691409 (+) |
CI01000001_10694664_10713151 | NA | coding | downstream | 60927 | 10694467 ~ 10714684 (+) |
CI01000001_10715529_10716091 | NA | coding | downstream | 81574 | 10715114 ~ 10716910 (+) |
CI01000001_10749174_10779222 | ARHGEF25A | coding | downstream | 115634 | 10749174 ~ 10779454 (+) |
CI01000001_10807407_10818870 | SLC26A10 | coding | downstream | 173780 | 10807320 ~ 10820053 (+) |
G18997 | NA | non-coding | upstream | 4637 | 10599026 ~ 10599251 (+) |
G19008 | NA | non-coding | upstream | 5074 | 10598604 ~ 10598814 (+) |
G19009 | NA | non-coding | upstream | 17594 | 10585956 ~ 10586294 (+) |
G19030 | NA | non-coding | upstream | 49919 | 10553689 ~ 10553969 (+) |
G19029 | NA | non-coding | upstream | 50227 | 10553344 ~ 10553661 (+) |
G19041 | NA | non-coding | downstream | 21029 | 10654569 ~ 10654922 (+) |
G18998 | NA | non-coding | downstream | 21847 | 10655387 ~ 10657271 (+) |
G19080 | NA | non-coding | downstream | 180850 | 10814390 ~ 10815702 (+) |
G19087 | NA | non-coding | downstream | 240442 | 10873982 ~ 10874233 (+) |
G19088 | NA | non-coding | downstream | 241130 | 10874670 ~ 10874871 (+) |
G18937 | NA | other | upstream | 127499 | 10474984 ~ 10476389 (+) |
CI01000001_10395420_10396473 | NA | other | upstream | 207183 | 10394851 ~ 10396705 (+) |
G18872 | NA | other | upstream | 322519 | 10271146 ~ 10281369 (+) |
G18873 | NA | other | upstream | 343174 | 10223879 ~ 10260714 (+) |
G19039 | NA | other | downstream | 217384 | 10850924 ~ 10853983 (+) |
G19314 | NA | other | downstream | 867654 | 11501194 ~ 11558673 (+) |
G19395 | NA | other | downstream | 1047782 | 11681322 ~ 11681817 (+) |
CI01000001_13514115_13517063 | NA | other | downstream | 2879864 | 13514115 ~ 13517063 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
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