LOC122325202 (btbd9,LOC107688314)


Basic Information

Item Value
gene id LOC122325202
gene name btbd9,LOC107688314
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1140650 ~ 1146850 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220162.1
ACGTCAACATCCGGGTCACGAGCAGATCGCCCGCGGCGCGCCACAAAATGGCCAGCGTCAGGACGGCGACGCGTTCGAGCTAGATCCACGAGTGGCGCGTCGGGATGCGACAGCGACGATGagcagcagcggcggcggcggctcCTCCGCGGCGGAGATCGATCACGGGCAGCTGCTGGCGGAGCAGCTCGGCTCGCTGGTGGCGGGACGGCTCTACAGTGACGTCACCTTCCTGGTGGAGCACAAGCGCTTTCCCGCGCACCGCGTCGTCCTGGCCGCGAGATGCCACTACTTCAGGGCTCTGCTGTACGGCGGCATGAAGGAGTCGGAGGCGCAGGCCGAGGTGCGTCTGGAGGACACGCGGGCCGAAGCCTTCGGGATGCTGCTGCAGTATCTGTACACGGGCCGGGCCAGCCTGAGCGCCGCTCGAGAGGAGCTGCTCCTGGACTTCCTGGGCCTGGCCCACCGCTACGGCCTGCAGCCGCTCGAGGACTCCACGTCTGAGTTCCTGAGCTCCGTGCTCGACTCTCACAATGTGTGCCTGGTGCTGGAGACGGCCGAGATGTACTCGCTGAGCGCCCTCGCTGCCTCCTGCTGCTGCTACATTGACCGGCACGCCCCGGAGCTGCTGAGGAGCGGCGCCACACTAGCACTTTCCAAGGCGGCGCTGCTGACCGTCATCCGGCGCGACTCTTTCGCAGCCAGTGAGCGCGAGATCTTCCAGGCTTTGGCCTGCTGGTGCCGACAGAACGCCGACGGCACAGacacacaggaagtgatgtcagcGGTGCGCCTGCCGCTCATGACGCTGACCGAGATGCTAAATGTGGTTCGACCCTCAGGTCTGGTTAGTCCAGATGACCTTCTAGACGCCATCAAGACCCGCTCAGAGACTAGAGACATGGACCTGAACCACCGAGGCATGCTGGttccGGAGGAGAACATCGCCACGATGAAGTATGGGGCTCAGGTGGTGAAAGGCGAGCTGAAGGCGGCTCTGCTGGACGGAGACACTCAGAACTACGATCTGGACCACGGCTTCTCCAGACACCCCATCGAGGAGGAGGGCCGCTCCGGGATCCAGGTCAAACTCGGCCAGGCCTTCATCATCAACCACATCCGTCTGCTGCTGTGGGACCGGGACAGCCGCTCGTACTCGTACTACATCGAGGTGTCTATGGATGAGCTGGACTGGGTTCGGGTGGTGGATCACTCCAAGTTCCTGTGCCGCTCCTGGCAGAACCTCTTCTTCTCTCCTCGGGTCTGCAGGTACGTGAGGATCGTAGGAACTCACAACACGGTCAATAAAGTCTTCCATCTGGTGGCGTTCGAGTGCATGTTCACCAGCCGCCCCTTCACTCTGGAGCAGGGCCTTGTGGtgccCAGTGAAAACGTGGCCACGGTCTCGGCGTGTGCGAGTGTGATCGAGGGAGTGAGCCGCAGCAGAAACGCTCTCCTGAACGGAGACACCCGCAGCTACGACTGGGACTCCGGCTACACCTGCCACCAGCTGGGCTCCGGAGCCATCGTCATCCAGCTCGCCCAGCCCTACGTCATCAGCTCGCTcaggCTGCTGCTGTGGGACTGTGACCAGCGCTCCTACAGCTACTACATCGAGGTGTCCACCGACCAGCAGCACTGGACCCGAGTGCTGGACCGCACCGCAGCGGCCTGTCGGTCGTGGCAGACGCTGAGGTTCGACAGGCAGCCGGCGGCGTTCGTTAGGATCGTGGGAACTCACAACACCGCTAACGAGGTCTTTCACTGCGTGCACTTCGAGTGTCCGGCGCCGCTGGAGCCCGGCCCCGCCCCGTCCTCGTGACGCTCCTCCAGACCGGACCacccttcatcatcatcatcatcatcgttaCTGGGTGACTTTGATCTGTTGTTGTGTTATTTATTCAATTGTTTACTTATTACTGGAAAAGTCAGTTGATCTGAAGCATCatgaaacatatttattcaAGTAAGAGTTTTGTCTCGTAATGTATTGAGTTCTGGTGATGACGTTGCACTGTAGCGTTGCTAGCGGACTGACACActtctttttagttttaattagatCCATCTGAACTGATCCTCACTAAATCAAAGTATAAGTGATGTTTTATTCTTCTCAGTGTTGTATTTCtagacgtttttttttatctgtggtGATGAACACAGTAGGAATAGATGGAGTTTGTGAGAGTCCCTGGTCTTCCAGAGTCTGAGTGTTTGCTCTGAGGCTgctcaggacacacacacacacacacacacacgtacgttTTGTAAGGCTGTAAATACTCATTTCGAGGCTGTGTATTTCTCTGTTTGTATCTGCTGAGCTTATTATTAAAGTGTTGTTTTCCACTA

Function

symbol description
btbd9 Acts upstream of or within brain development. Orthologous to human BTBD9 (BTB domain containing 9).

NR:

description
PREDICTED: BTB/POZ domain-containing protein 9-like

GO:

id name namespace
GO:0007155 cell adhesion biological_process

KEGG:

id description
K10481 BTBD9; BTB/POZ domain-containing protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220162.1 True 2358 mRNA 0.58 10 1140650 1146850

Neighbor

gene id symbol gene type direction distance location
slc35a1 slc35a1,LOC107709883,LOC107675061 coding downstream 53070 1081075 ~ 1087580 (-)
LOC122324736 syncrip,LOC107709954,LOC107563155,LOC107675091 coding downstream 82602 1048850 ~ 1058048 (-)
gjb7 gjb7,cx28.8,LOC107563147,LOC107569825,LOC107709909,LOC107576048 coding downstream 115376 1021630 ~ 1025274 (-)
med23 med23 coding downstream 235559 867719 ~ 905091 (-)
arhgap18 arhgap18,LOC107660538,LOC107740524,LOC107653144,LOC107560483 coding downstream 502094 613675 ~ 638556 (-)
LOC122324370 LOC107688317,LOC107708306,LOC107697512,LOC107572741 coding upstream 7214 1154064 ~ 1160381 (-)
zgc:112001 NA coding upstream 15826 1162676 ~ 1164732 (-)
lrfn2b lrfn2b,lrfn2,LOC107563150,LOC107697513,LOC107708309,LOC107688310,LOC107558970,LOC108443927 coding upstream 22946 1169796 ~ 1223016 (-)
tab2 tab2,LOC107739913 coding upstream 146368 1293218 ~ 1311655 (-)
trnag-ucc_6 NA coding upstream 306248 1453098 ~ 1453168 (-)
G135225 slc16a10,LOC107563131 non-coding downstream 10574 1127292 ~ 1130076 (-)
G135277 NA non-coding downstream 33546 1106777 ~ 1107104 (-)
G135226 NA non-coding downstream 70761 1007146 ~ 1069889 (-)
G135222 NA non-coding downstream 113769 1025472 ~ 1026881 (-)
G135234 NA non-coding downstream 216141 924266 ~ 924509 (-)
G135297 NA non-coding upstream 91110 1237960 ~ 1238160 (-)
G135323 NA non-coding upstream 140242 1287092 ~ 1287309 (-)
G135339 NA non-coding upstream 266953 1413803 ~ 1422222 (-)
G135365 LOC107554153,LOC107660512,LOC107731522,LOC107742993,LOC107550541,LOC107678325 non-coding upstream 406261 1553111 ~ 1555177 (-)
G135368 NA non-coding upstream 408418 1555268 ~ 1557577 (-)
G135279 NA other downstream 29789 1110425 ~ 1110861 (-)
G135275 NA other downstream 34832 1103306 ~ 1105818 (-)
G135276 NA other downstream 37537 1102705 ~ 1103113 (-)
G135237 NA other downstream 175255 938165 ~ 965395 (-)
epb41l2 epb41l2,LOC107717037,LOC107560489,LOC107697498,LOC107653142,LOC100380760,LOC107711607 other downstream 318140 753567 ~ 822510 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other upstream 399637 1546487 ~ 1571699 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other upstream 508246 1655096 ~ 1660536 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other upstream 693278 1840128 ~ 1876292 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other upstream 858699 2005549 ~ 2013527 (-)
G135548 NA other upstream 1217203 2364053 ~ 2364824 (-)

Expression


Co-expression Network