LOC122325205 (LOC107726734)


Basic Information

Item Value
gene id LOC122325205
gene name LOC107726734
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22889804 ~ 22893878 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220166.1
AATGGTTCAAAATGTGCATTACACGATCAGTCGACACTGTTTGTCAGATTTTGAAAGGAAAGATGATCACTTTATCTCTTGTCCTGGTCTTAATTACAGTCCAGTGGTCCTGGGCTCAGGAAGATCCTCTTCTGCCTTTCTCTGAACACCTGGACCTCGAGCACAAGGTGCAGCTGAAGTGGGGATTTGATGAAATCCGGGACACCATCTTGTTCGAGCTCACCTTTAACACTGTCGGCTGGGTCGGTTTCGGCTTCAGCCCCAATGGAGGAATGACTGGAGCCGACGTCGTGATTGGAGGAGTTGGACCCAAAGGGAGTTACTTCACGgaCCGTCATGCTGTGGGGACATCAATGCCTCTGGTTGACAAGCAACAGAACTACAAACTCCTGTCTCTGACCGAGTCTGATGGGAAAACAGTCATGAAGTTTCAGAGGTCCATCAGTTACTGTGATGAAAATGATTTACCCATCACCGAGCTCCCCATGAAGCTGATCTACGCATACGGAGAGACTGATGAAATCACGTACCACGGCAACCGAAGAGGCACAAAGGAGCTGAACCTGTTGAAGTACATGCCTCAGTCCAACCCTCCAAACAGCAACTTTTTTGACATAACTACAGTCAATttCACTGTGCCGGCCAACCAAACCTACCATCACTGCAAGGTTATGAAAATCCCAACATTTTAtcacaaaaagcacatttatcgCATTGCGCCGGTGATCACAAACGTTGACATTGTGCATAATCTTGCACTGTACCGCTGTCCTCCAAGCGTGACCGAACCATTTGAGGCGGATTGTTACTCATCGTCGTCAAGACCTAACTTGTGTATCGAGGTCGTGGCTGTGTGGGGAGTTGGTGGACTGGGTTATGAATTTCCAGAAGCGGCAGGACTTCCAATTGGAGGAAATATTAAAGCCTCTTTCTACAAGCTTGAAGTGCATTACAACAACCACAATCTTGCAAGTCGAGTTGATAGCTCAGGTCTGCGATTGCATTACACATCTGAACTCCGTCAGCACGATGCAGGTGTTCTGATTACGGGGCTTGCAGTGGCCCCGGGGTACGCCATCCCACCCAAAGCCAAATCCTTCCTCACGTACGGTCTGTGTGACACTGCTTATATTCCAAAGGTTGTGGAGAAGTCAAATGATCTTCAGCTTTTCTCCGTGATGCTGCACACAAACTTAGTTGGGAGAAAAGTGCGAGTCGGCCAATTTAGAGAAGGTAGACAGATCGACTTTGTAGCTGTGGATGAAAACTATGATTTTGAGTATCAAGAAGTGACCAATTTGGGTGAAACAAAGACCGTGAAGTTGGGTGACAAATTGCTGGTGGAGTGCACCTATAATACTGAGAAACGCAACACACTCACATGGGGGGGATTTTCAACTTCAGATGAGATGTGTTTGGCAGTCCTCTTCTACTATCCAGCTATGAATCTGAGCACCTGTGTGAGCTTCCCTAATACAACCACTTTAATATCTGAGATGGGAGCAAAAGATCCAGATACTTGGCTCAAAATGATGTCCACAAAGACTTGGACTGACACGTCTATTAATCAGTACCAACAAACACTGAAGAGAATCGACCAGATTGTCCAGGTCATGAATTCAACCAACAACATATCGATCAACACAGGGCTGATTCCTGACCTCAAAGCCATCCCATCTGCACCCTGCATGAATAACACTGCCCAAGCCTTGCATTAATGTTTGCAGGGTGTACCTGTGAGCTCTTTGAAAATGgcataaataaatggatgaaaCCA

Function

NR:

description
PREDICTED: DBH-like monooxygenase protein 2 homolog

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005507 copper ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220166.1 True 1777 mRNA 0.46 13 22889804 22893878

Neighbor

gene id symbol gene type direction distance location
LOC122325206 LOC107726734 coding upstream 1133 22884107 ~ 22888671 (+)
LOC122325208 LOC107726734 coding upstream 6828 22878750 ~ 22882976 (+)
efr3bb efr3bb,ccl33.2,LOC107726755,LOC107678842,LOC107697142,LOC107549699 coding upstream 50358 22807159 ~ 22839446 (+)
LOC122325427 NA coding upstream 100668 22787465 ~ 22789136 (+)
mixl1 LOC107743324,LOC107697096,LOC107726752,LOC107678837,LOC107603100,LOC107549665 coding upstream 119928 22767835 ~ 22769876 (+)
LOC122325007 LOC107726733,LOC107726732,LOC107726734 coding downstream 1129 22895007 ~ 22899921 (+)
LOC122325009 LOC107726732,LOC107549670,LOC107726733,LOC107697073,LOC107549671,LOC107697074,LOC107553823,LOC107678815 coding downstream 7106 22900984 ~ 22906361 (+)
LOC122325008 LOC107726732,LOC107678815,LOC107697073,LOC107549671,LOC107549670,LOC107697074,LOC107726733 coding downstream 13646 22907524 ~ 22914772 (+)
dusp23a LOC107726750,LOC107678830 coding downstream 21438 22915316 ~ 22917280 (+)
unc93a unc93a,LOC107678861,LOC107743326,LOC107697148 coding downstream 139821 23033699 ~ 23038040 (+)
G141091 NA non-coding upstream 332302 22557229 ~ 22557502 (+)
G141084 NA non-coding upstream 347272 22542136 ~ 22542532 (+)
G141081 NA non-coding upstream 348477 22541118 ~ 22541327 (+)
LOC122324401 NA non-coding upstream 774937 22098405 ~ 22114867 (+)
G141121 NA non-coding downstream 26815 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 172709 23066587 ~ 23073665 (+)
LOC122324747 NA non-coding downstream 300743 23194621 ~ 23206082 (+)
G141207 NA non-coding downstream 436313 23330191 ~ 23332366 (+)
G141216 NA non-coding downstream 494614 23388492 ~ 23408824 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 29477 22842805 ~ 22860327 (+)
matn3a matn3a other upstream 135643 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 372121 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 413030 22471761 ~ 22476774 (+)
G140785 NA other upstream 1045103 21844146 ~ 21844701 (+)
pln NA other downstream 449837 23343715 ~ 23351655 (+)
G141475 NA other downstream 1178993 24072871 ~ 24074423 (+)
G141524 NA other downstream 1546365 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 1563112 24456990 ~ 24482661 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 2075002 24968880 ~ 24994837 (+)

Expression


Co-expression Network