LOC122325208 (LOC107726734)


Basic Information

Item Value
gene id LOC122325208
gene name LOC107726734
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22878750 ~ 22882976 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220169.1
CTTCTCCAGGACTGAGTTTGGGCAGCTCTGGGTTACACGCAGCTTAAAGGGCGCTGTTCAAGTGACCACAGAGCACTTTCATGCAATTGCCTTCTCAAACGTCTTACACGCTTGTcagattttgaaagaaaagatGAACACTTTATCTCTTGTCCTGGTCTTAATTACGGTCCAGTGGTCCTGGGCTCAGGAAGACCCTCTTCTGCCTTTCTCTGAACACCTGGACCTCGAGCACAAGGTGCAGCTGAAGTGGGGATTTGATGAAATCCAGGACACAATCTTGTTCGAGCTCACCTTTAACACTGTCGGCTGGGTCGGTTTCGGCTTCAGCCCCAAAGGAGGAATGACTGGAGCCGACGTCGTGATTGGAGGAGTTGGACCCAAAGGGAGTTACTTCACGgaCCGTCATGCTGTGGGGACATCAATGCCTCTGGTTGACAAGCAACAGAACTACAAACTCCTGTCTCTGACCGAGTCTGATGGGAAAACAGCCATGAAGTTTCAGAGGTCCATCAGTTACTGTGATGAAAATGATTTACCCATCACCGAGCTCCCCATGAAGCTGATCTACGCATACGGAGACACTGATGAAATCACGTACCACGGCAACCGAAGAGGCACAAAGGAGCTGAACCTGTTGAAGTACATGCCTCAGTCCAACCCTCCAAACAGCAACTTTTTTGACATAACTACAGTCAATttCACTGTGCCGGCCAACCAAACCTACCATCACTGTAAGGTTATGAAAATCCCAACATTTTAtcacaaaaagcacatttatcgCATTGCGCCGGTGATCACAAACGTTGACATTGTGCATAATCTTGCACTGTACCGCTGTCCTCCAAGCGTGACCGAACCATTTGAGGCGGATTGTTACTCATCGTCGTCAAGACCTAACTTGTGTATCGAGGTCGTGGCTGTGTGGGGAGTTGGTGGACTGGGTTATGAATTTCCAGAAGCAGCAGGACTTCCAATTGGAGGAAATATTAAAGCCTCTTTCTACAAGCTTGAAGTGCATTACAACAACCACAATCTTGCAAGTCGAGTTGATAGCTCAGGTCTGCGATTGCATTACACATCTGAACTCCGTCAGCACGATGCAGGTGTTCTGATTACGGGGCTTGCAGTGGCTCCGGGGTACGCCATCCCACCCAAAGCCAAATCCTTCCTCACGTACGGTCTGTGTGACACTGCTTATATTCCaaagGTTGTGGAGAAGTCAAATGATCTTCAGCTGTTCTCCGTGATGCTGCACACAAACTTGGTTGGGAGAAAAGTGCGAGTCGGCCAATTTAGAGAAGGTAGACAGATCGACTTTGTAGCTGTGGATGAAAACTATAATTTTGAGTATCCAGAAGTGACCAATTTGGGTAAAACCAAGACCGTGAAGTTGGGTGACAAATTGCTGGTGGAGTGCACCTATAATACTGAGACACGCAACGCACTCACATGGGGGGGATTTTCAGCTTCAGATGAGATGTGTTTGGCAGTCCTCTTCTACTATCCAGCTATGAATCTGAGCACCTGTGTGAGCTTCCCTAATACAACCACTTTAATATCTGAGATGGGAGCAAAAGATCCAGATACTTGGCTCAAAATGATGTCCACAAAGACTTGGACTGACGCGTCTATTAATCAGTACCAACAAACACTGAAGCGAATCGACCAGATTGTCCAGGTCATGAATTCAACCGACAACATATCGATCAACACGGGGCTGATTCCTGACCTCAAAGCCATCCCATCTGCACCCTGCATGAATAACACTGCCCAAGCCTTGCATTAATGTTTGCAGGGTGTACCTGTGAGCTCTTTGAAAATGgcataaataaatggatgaaaCTA

Function

NR:

description
PREDICTED: DBH-like monooxygenase protein 2 homolog

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005507 copper ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220169.1 True 1848 mRNA 0.47 13 22878750 22882976

Neighbor

gene id symbol gene type direction distance location
efr3bb efr3bb,ccl33.2,LOC107726755,LOC107678842,LOC107697142,LOC107549699 coding upstream 39304 22807159 ~ 22839446 (+)
LOC122325427 NA coding upstream 89614 22787465 ~ 22789136 (+)
mixl1 LOC107743324,LOC107697096,LOC107726752,LOC107678837,LOC107603100,LOC107549665 coding upstream 108874 22767835 ~ 22769876 (+)
zpax1 LOC107603073 coding upstream 114871 22758359 ~ 22763879 (+)
ttc32 ttc32,LOC107678832,LOC107743292,LOC107697098 coding upstream 120771 22755992 ~ 22757979 (+)
LOC122325206 LOC107726734 coding downstream 1131 22884107 ~ 22888671 (+)
LOC122325205 LOC107726734 coding downstream 6828 22889804 ~ 22893878 (+)
LOC122325007 LOC107726733,LOC107726732,LOC107726734 coding downstream 12031 22895007 ~ 22899921 (+)
LOC122325009 LOC107726732,LOC107549670,LOC107726733,LOC107697073,LOC107549671,LOC107697074,LOC107553823,LOC107678815 coding downstream 18008 22900984 ~ 22906361 (+)
LOC122325008 LOC107726732,LOC107678815,LOC107697073,LOC107549671,LOC107549670,LOC107697074,LOC107726733 coding downstream 24548 22907524 ~ 22914772 (+)
G141091 NA non-coding upstream 321248 22557229 ~ 22557502 (+)
G141084 NA non-coding upstream 336218 22542136 ~ 22542532 (+)
G141081 NA non-coding upstream 337423 22541118 ~ 22541327 (+)
LOC122324401 NA non-coding upstream 763883 22098405 ~ 22114867 (+)
G141121 NA non-coding downstream 37717 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 183611 23066587 ~ 23073665 (+)
LOC122324747 NA non-coding downstream 311645 23194621 ~ 23206082 (+)
G141207 NA non-coding downstream 447215 23330191 ~ 23332366 (+)
G141216 NA non-coding downstream 505516 23388492 ~ 23408824 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 18423 22842805 ~ 22860327 (+)
matn3a matn3a other upstream 124589 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 361067 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 401976 22471761 ~ 22476774 (+)
G140785 NA other upstream 1034049 21844146 ~ 21844701 (+)
pln NA other downstream 460739 23343715 ~ 23351655 (+)
G141475 NA other downstream 1189895 24072871 ~ 24074423 (+)
G141524 NA other downstream 1557267 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 1574014 24456990 ~ 24482661 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 2085904 24968880 ~ 24994837 (+)

Expression


Co-expression Network