ndufaf7 (ndufaf7,LOC107752688,LOC107670241)


Basic Information

Item Value
gene id ndufaf7
gene name ndufaf7,LOC107752688,LOC107670241
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2663778 ~ 2670855 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220179.1
atcagagcaaagGACTTGTGACAGCATGTTGATAGTTTGTGGATTTAGTGTACATTGATGTTATATGATTTCGATTTCTCTGATAAGGCGAGCAGCATGAGAACTCTGCTGAGGCTGAAGCGGCTAATGCCTGAAGTGCGGTGGACCATGTGGCAAAACAGATCCTGTTCAAACTCTTCCATCCAGAGACTGGAGTCAAACGCATCCATCCATAAACATCTTATCTCCAAGATTACTGCCACCGGTCCAATTTCAGTAGCTGAGTACATGAGGGAGGCACTCACCAATCCAGTGGCGGGATATTACGTGAAAAATGACATGCTTGGAGCAGGAGGTGATTTTATAACTTCACCAGAGATTAGTCAAATTTTCGGAGAGCTGTTGGGTGTCTGGTGTGTCAGTGAATGGATGGCGGCTGGGAAACCCAGCATGTTTCAGTTAGTGGAGCTAGGACCAGGTAGAGGCTCATTGGCCAGTGACATCCTGAGGGTCTTTAGTCAGTTAAAAGCTGTCTTGGGTGAGACCGATATCTCTGTTCATCTGGTGGAGGTCAGCCCAAAGTTGAGCCAGATTCAGGCTGAATGCCTAACTGCAGATAATACACAGCCCAATGATGGTGATCAGAATGTTTACCGCAGTGGCATCACATTTACAGGCCTGCCTATATACTGGTACCGCAGGATAGAGGACATCCCAAGAGGTTTTAGTGTCATCCTTGCCCATGAATTTTTTGACGCTTTACCCATTCACAAGTTTCAGagAACAGAGAAAGGCTGGCGGGAGGTAATGGTTGATATTGATCCCGAAAGTCCAGAAAAACTAAGATTTGTGGTTTCTCGCAGTCCTACACTGGCCTCCAGCATTTTTATACAGaAAGATGAAAACAGAGAGCATGTGGAAGTATGTCCAGAAGGTGGAGTCATTGTTCAGAAACTGGCAAATCGGATTGTAGAGGATGGAGGTGCAGCCTTGATTGTAGACTATGGACATGACGGAACAAAAACTGATACTTTCAGAGGCTTTAAAGGCCATCAAATCCACAATGTCTTAGAGGCACCTGGCATGGCAGACTTGACGGCAGATGTTGACTTCAGTTACCTGAGAAAAATGGCAGGAAATGAGGTGACCTGCTTGGGACCCCTCACACAAAGATCCTTCCTGAAGAACATGGGCATTGATTCACGGTTGCAGGTCCTCTTAAGGAACTGTCCTGACCCCTCCACCAGAGCGCAGCTCATCCGCAGCTGTGACATGCTAATTAACCCTGAGAAAATGGGACACCGGTTTCAGTTCTTCTCTCTGCTTAATCAAGGTCGGCTGGCTCAGTATAAAGGAATGCAGAAGAACACAGCACCATTGCCAGTGGCTGGCTTTGCTGAGCTGGACATGCAATGAAAAGACAGCAAATGGACTTAATGTTGCAGCATCCATGTTTAACTAGACAACCAGATGTAATCTTAGCTTATCGAATACTTTGTATCATCTTTATCTTTGCTGTGTTTGACTTAGATTCACCAGTACAGCATCAATGTCCCAACATCTAGTTGTAGGCCTTCCCAAAAGTGTCTAAGCAGTTTAGCAATAAAGCAAAGAAATAATCCTA

Function

symbol description
ndufaf7 Predicted to enable protein-arginine omega-N symmetric methyltransferase activity. Involved in mitochondrial respiratory chain complex I assembly. Acts upstream of or within chordate embryonic development. Predicted to be active in mitochondrion. Orthologous to human NDUFAF7 (NADH:ubiquinone oxidoreductase complex assembly factor 7).

NR:

description
protein arginine methyltransferase NDUFAF7, mitochondrial

GO:

id name namespace
GO:0032981 mitochondrial respiratory chain complex I assembly biological_process
GO:0005739 mitochondrion cellular_component

KEGG:

id description
K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220179.1 True 1603 mRNA 0.45 10 2663778 2670855

Neighbor

gene id symbol gene type direction distance location
lama4 lama4 coding downstream 31635 2596412 ~ 2632143 (-)
tube1 tube1,LOC107670257,LOC107703869 coding downstream 68982 2584067 ~ 2594796 (-)
si:dkey-119m7.4 si:dkey-119m7.4,LOC107704351,LOC107670234,LOC107565461,LOC107755002,LOC107709524 coding downstream 113079 2538637 ~ 2550699 (-)
fynb fyn,fynb,LOC107704353,LOC107755004,LOC103458010 coding downstream 130651 2480372 ~ 2533127 (-)
ndufaf4 LOC107755001,LOC107565458 coding downstream 184964 2474871 ~ 2478814 (-)
LOC122325188 LOC107714796,LOC107565462,LOC107670243,LOC107550532,LOC107676708,LOC107715681,LOC105017614,LOC106607890 coding upstream 90291 2761146 ~ 2778825 (-)
rev3l rev3l,LOC107675651,LOC107705450,LOC107712405,LOC107676701,LOC107569208 coding upstream 116284 2787139 ~ 2848625 (-)
LOC122324357 tshr,LOC107657214,LOC107728338,LOC107569215,LOC107681439,LOC107549347,LOC107742823 coding upstream 461226 3132081 ~ 3179282 (-)
LOC122324803 rev3l,LOC107675651,LOC107705450,LOC107712405,LOC107676701 coding upstream 525458 3196313 ~ 3220549 (-)
LOC122324861 rhob,LOC107730407,LOC107704819,LOC107569216,LOC107549346,LOC107657220,LOC105907285,LOC103025336,LOC106607565 coding upstream 801139 3471994 ~ 3473405 (-)
G135658 marcks,LOC107709525,LOC107676707,LOC107570520,LOC107715691,LOC107670244 non-coding downstream 16697 2644181 ~ 2647081 (-)
G135629 NA non-coding downstream 84076 2579269 ~ 2579702 (-)
G135627 NA non-coding downstream 86290 2577132 ~ 2577488 (-)
G135546 NA non-coding downstream 305087 2358478 ~ 2358691 (-)
G135542 NA non-coding downstream 563537 2099996 ~ 2100241 (-)
G135674 LOC107715685,LOC107670242,LOC107714794 non-coding upstream 61748 2732603 ~ 2737889 (-)
G135691 NA non-coding upstream 88242 2759097 ~ 2760884 (-)
G135781 NA non-coding upstream 188412 2859267 ~ 3231374 (-)
G135782 NA non-coding upstream 195939 2866794 ~ 3238869 (-)
G135800 NA non-coding upstream 449486 3120341 ~ 3527057 (-)
G135548 NA other downstream 298954 2364053 ~ 2364824 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other downstream 650251 2005549 ~ 2013527 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other downstream 787486 1840128 ~ 1876292 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 1003242 1655096 ~ 1660536 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other downstream 1092079 1546487 ~ 1571699 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other upstream 69697 2740552 ~ 2757430 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 967434 3638289 ~ 3870066 (-)
LOC122325550 NA other upstream 1297908 3968763 ~ 3975258 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other upstream 1893501 4564356 ~ 4582097 (-)
si:ch73-111k22.3 LOC107742221 other upstream 2340526 5011381 ~ 5012580 (-)

Expression


Co-expression Network