CI01000001_10688354_10691353


Basic Information

Item Value
gene id CI01000001_10688354_10691353
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10687862 ~ 10691409 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10688354_10691353.mRNA
ATATATATAGTCATGCAGTAATGTATGTTTTAGCATCATTTGGAGCAAAAGCACAAAAACAAATAATATGCTAGCAACTTGTTTTTATACACATTTGTCAGTTGTTCTTTTCTGTTGTTCCGCTGTATGTGCCCTTATCCCAACCTTTCCAAAATCTATATGCACCATATCAATAAACAAATCCATTGTATCTCACCATTAAAAGTGCTCAGAAGAGGGTTTAATGTTGTCCACGTCTCTCTGGGTGATCAGATCATTGCTCCTGCTGTGTCTGTGTAGTCCTCCCAGTATGGATTCTTACTGTAGACTGTGTGATCCCGCTGGACAGAGCCGTGTCCCTGCCTGTCCCCTCCTCCCAGCCCTCCGAGTCTGCTTGGACACTTAGGCCTCCGATCACTGAGGAATCCCTCTAAATCTTGACACAGGTGCTCTGTTAAGACAGGCATGTCCACTCATCCTGATTACAAGAGATTTGTGGATTAACATTCAGAAATGGCAGCTGCCAGTGAGATTGTCGCTGCTTCATTTCTGTGGTGCAAAGCAAATCCAGCCAAACCTTGCGGTAGTTCAGAGCCGGATCAGGTCAGGTTGGCTGATGAGTTGGATTCGGAGAGCAGGAGGAGAGGTGATGTGCGGCCACAGTTATTTTCTCAGACTGTTGACCTGAAGCACAAGAGTTATTGCAGTGCAAAGACTCAGGAAATGAGATGGAGAAAGAGGAAGCTCAGCTGGCCTTAGAGAGCATTCAAGTGGGGGGACTCTTTCCACAAGAGGAGAAAGAGATTTAATGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10688354_10691353.mRNA True 794 mRNA 0.45 2 10687862 10691409

Neighbor

gene id symbol gene type direction distance location
CI01000001_10604980_10633286 KMT2D coding upstream 54322 10603888 ~ 10633540 (+)
CI01000001_10590766_10595793 DHH coding upstream 91624 10590436 ~ 10596238 (+)
CI01000001_10582439_10582802 NA coding upstream 105041 10582378 ~ 10582821 (+)
CI01000001_10573770_10582123 LMBR1L coding upstream 105624 10573770 ~ 10582238 (+)
CI01000001_10538498_10539667 RPS26 coding upstream 148160 10538388 ~ 10539846 (+)
CI01000001_10694664_10713151 NA coding downstream 3058 10694467 ~ 10714684 (+)
CI01000001_10715529_10716091 NA coding downstream 23705 10715114 ~ 10716910 (+)
CI01000001_10749174_10779222 ARHGEF25A coding downstream 57765 10749174 ~ 10779454 (+)
CI01000001_10807407_10818870 SLC26A10 coding downstream 115911 10807320 ~ 10820053 (+)
CI01000001_10856786_10861403 C1GALT1A coding downstream 164551 10855960 ~ 10862138 (+)
G18998 NA non-coding upstream 30591 10655387 ~ 10657271 (+)
G19041 NA non-coding upstream 32940 10654569 ~ 10654922 (+)
G18997 NA non-coding upstream 88611 10599026 ~ 10599251 (+)
G19008 NA non-coding upstream 89048 10598604 ~ 10598814 (+)
G19009 NA non-coding upstream 101568 10585956 ~ 10586294 (+)
G19080 NA non-coding downstream 122981 10814390 ~ 10815702 (+)
G19087 NA non-coding downstream 182573 10873982 ~ 10874233 (+)
G19088 NA non-coding downstream 183261 10874670 ~ 10874871 (+)
G19034 NA non-coding downstream 201028 10892437 ~ 10896905 (+)
G19130 NA non-coding downstream 234119 10925528 ~ 10986466 (+)
G18937 NA other upstream 211473 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 291157 10394851 ~ 10396705 (+)
G18872 NA other upstream 406493 10271146 ~ 10281369 (+)
G18873 NA other upstream 427148 10223879 ~ 10260714 (+)
G19039 NA other downstream 159515 10850924 ~ 10853983 (+)
G19314 NA other downstream 809785 11501194 ~ 11558673 (+)
G19395 NA other downstream 989913 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2821995 13514115 ~ 13517063 (+)

Expression


Co-expression Network