fam89a (fam89a,LOC107727345,LOC107742210,LOC107685750,LOC107679680)


Basic Information

Item Value
gene id fam89a
gene name fam89a,LOC107727345,LOC107742210,LOC107685750,LOC107679680
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5060707 ~ 5064427 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220233.1
ttttaaacaggtCAGCAGCAAGTAAACAATGTCATACATGTGATAAAAATGTAGGTTACCACACAATAGCTCTGGCTGCGCTTTGATCAGAAGAAAAGATTAATTCAGAACTTaatgctcatgaatattaatgaccTCGCTGTCCGTCATCGACGGCCACGCCCAGTCTGCTCCGGGTCTCTTTAAAGCGACAGGAAGTGCGAGCTGAGTTTCAGCCTCACAGATTATAGTGTTGTTCGGACCGCTGGCTGTTACATGGGCTTTTCGACGACGGGGTGTAAAGGTCTTTAAGAAAACCGTCACATGCCGTTACAGTGCACTCGTCTGTAAGCAGAGCGTGCTATTTGTGAATGTTAGTATGAATGGTAAGGTTGGGAATGGAGCAGCGGGCGGTATGCTGGCCTGTATTGAGGGTCTGCCGCCGTTGCCCAAGAGCCTAAGCGGTCTGCTCAACTCCAGCGGCGGCTCgtggagagagatggagaggatGTACGTGAAGAAGACCATGATCCAGGACGACTTGAGTCGAGGAAGGAATAACACGGACAATCTGCTGGCGAATAAACCGGCAAACCTGGATGCCGCCCTTGCTTTGCTCAGAAAAGAGATGGTGGGTTTGAGGCAGCAGGACATGTCCCTGCTCTGTCAGCTCTGGTCCCTTCACGAGTCCATCCAGGAGTACAAGGGCAGCTGCCAGGACCTCTCCGCTGTGTCCAGCGCGGACGGACCCTACGGGATGGAGAACGGCTATTTCGACGAAGATGAGGAATATTATACCGAGTCCGGCATGACGCCAGCCGAAACGCCAGATGGAAACGACACATCTCCTAAAAACGGGACATCCAAAGACAGCTGGATACACGACTCGTTCCATATCACGATCTAAAACACTTGACTTTTATTGtttaacgaaaaaaaaaagaagctgtgCCATAATTAAGTTTGCTGGCATTGTTTAGGTTTACAGCAGACTCTTTCTATAGGACATATAATtgagaattattatttattgtataatattctacatagtatttttttttcctgatttaaTCAACATTGGAAATTttataaaatcctttttttttaataaggggAGAAGCATGTCATTTCATAATGATGTTTACAGGAAATCACGTTAAACTTGCGTTGATGAatttatagactttttttttttttgtttttgtttgatgctTCACTTTCTCCGAGTCGAGAAAAGTCTTATTTCTTGTCGAGCAGTCGCTCGCAGAACACCGgggtttggttgttttttttgcaaatatgagTTCTGAACATGCTGGAAATGCTACTCGTTGTTTGCCGAAATGTAATCCAGGGTATAACCAGCACAAAGAGCTTGTGGCAGCATCACCGAAACGGTTTGCTCAAATGCATTACGTATCGTGTAACTCATTACGAACGTATCCATAAGTAAGTAAATCCATAACCGGCTCCGTAACATTTCCATAGCATTTACTTCTCGCATCGTGCAAACCTGTTCTAGATCATGTATAgtagatgttttatttatttacttataatcGCTGCTTGGGTTCAGTCTTCCGTCTGTGCTTGAACTTCGTCTCGGTGCATATCGCGAGAGCGTCTCTTTTTGCTCGAGTGACTCTCATAAGGTCACCTGTGTTCGTAACGTGAGATGATAAACTTTTGGCAAGTTAAGTGCCCGTTAAATCGCGCGTGCGTACCACGGCATGCCATAATGTAAGCGTTTTAAACCTTTTCTCGATGCGTTGATGAATCGAATGCCTTGGGATTGAACACGCGTGCCGTTCTGGATCATCTAATTGATAATCGCCGGAGCGTGTTTCCTCTATAAGAATATTAATATCAGCCGAGAGAGAATGTCTTCTACCTCTGTTGTGTTTGAGCTCGCACCAGCAGACACAGACAAGTGGCTATTTTGAATTCCCAGCATTTACGCCAATCCCGATTCTTCCAATGTATTTAattctgagagagagaaaaaaaaatgaaatgttatgcaACCGGCTTAAGGTGCTTTTACCAAAATCGGCACTGACCTTCACACAACGTGCCTTGACGCACCTTGGTTTTGAACCTGGGTGTTTTTTGCCGTCTCTTGTTATCGTTTCGTATCAACACCCGGCGTCTTCATGCATCCATTTCGGTCCCTCTCATTAACAGAAGAAGGTTCCACCCAGAAAATGTCTGCTCGCCACCCATCTCATTATCTTCTACCCTGCGGGGATTCATTGCTGTGATCCTGCTCGGAAATTCCCACTCGGTTTTCGTGATCTGCGTAGAAGCCGGTGAAAGTGATTTTTGGCCTGTTTGATCTCTGTGGACGGTCGTGAAGCGGCTTCTGCAGTTTTGCATTCGAAAGATGCTAAATGACGTGGTTAGATCCTTTTGTATGTTCTGTTACGTGTGTTAgcgatataaaataaatgtaacgaCGTATGGTCCGTCTGGGTTTTATGTCACTTTAGAATTTTAGCGttcaaattcaatatatttattcaatataaaaatatcagcatataaatgcttttgcttctgtcaaacgattaattgcatccgaaataaaggttttttttgcataa

Function

symbol description
fam89a Orthologous to human FAM89A (family with sequence similarity 89 member A).

NR:

description
PREDICTED: protein FAM89A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220233.1 True 2582 mRNA 0.43 2 5060707 5064427

Neighbor

gene id symbol gene type direction distance location
ttc13 ttc13,LOC107679664,LOC106571397 coding downstream 8272 5034349 ~ 5052435 (-)
LOC122324828 cnksr3,ipcef1,LOC107560196,LOC107742203,LOC107679663,LOC107678675 coding downstream 50148 4973048 ~ 5010559 (-)
LOC122324969 tiam2,LOC107560208,LOC107678678,LOC107742216 coding downstream 93926 4928862 ~ 4966781 (-)
LOC122324970 cldn20,LOC107560197,LOC107678665,LOC107555306,LOC107679668,LOC107742202 coding downstream 132547 4917807 ~ 4928160 (-)
bcl11bb LOC107742200,LOC107678676,LOC107679682,LOC107560207,LOC107555305 coding downstream 179080 4849379 ~ 4881627 (-)
sprtn sprtn,LOC107685751,LOC107727344,LOC107679685,LOC107742220,LOC107548399,LOC107733995 coding upstream 2188 5066615 ~ 5072155 (-)
c20h1orf131 LOC107727347,LOC107685755 coding upstream 51421 5115848 ~ 5121484 (-)
ints7 ints7,LOC107685756,LOC107659878 coding upstream 311526 5375953 ~ 5385180 (-)
kcnk3a kcnk3,kcnk3a,LOC107562302,LOC107685790,LOC107574791 coding upstream 352322 5416749 ~ 5431038 (-)
LOC122324477 ezrb,ezr,LOC107685759,LOC107745284,LOC107549516,LOC107733309,LOC107659875,LOC106607585 coding upstream 415247 5479674 ~ 5502647 (-)
G136176 NA non-coding downstream 26903 5033599 ~ 5033804 (-)
G136175 NA non-coding downstream 41841 5018361 ~ 5018866 (-)
G136069 NA non-coding downstream 323901 4736549 ~ 4736806 (-)
G136012 NA non-coding downstream 614504 4445773 ~ 4446203 (-)
trnat-ugu_51 NA non-coding downstream 762152 4298483 ~ 4298555 (-)
G136180 NA non-coding upstream 26873 5091300 ~ 5097061 (-)
G136188 NA non-coding upstream 47746 5112173 ~ 5119766 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding upstream 587872 5652299 ~ 5652925 (-)
G136356 NA non-coding upstream 636754 5701181 ~ 5701475 (-)
G136368 NA non-coding upstream 795526 5859953 ~ 5860623 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 31140 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 48127 5011381 ~ 5012580 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 478610 4564356 ~ 4582097 (-)
LOC122325550 NA other downstream 1085449 3968763 ~ 3975258 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other downstream 1190641 3638289 ~ 3870066 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other upstream 96779 5161206 ~ 5360069 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other upstream 526911 5591338 ~ 5598666 (-)
G136357 NA other upstream 637252 5701679 ~ 5703911 (-)
zpax2 NA other upstream 859639 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 1210327 6274754 ~ 6302976 (-)

Expression


Co-expression Network