CI01000001_10715529_10716091


Basic Information

Item Value
gene id CI01000001_10715529_10716091
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10715114 ~ 10716910 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10715529_10716091.mRNA
GGATAAAAGGGGGAGTGGGAGCTGTATCCTGGAATAGCCAGCAAGTCAAGCTGCTAACTCCACCCCCTCACCCCCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTGGCAGTCTTACAGTCTGTCATTTGAGCGGACAGTGAGAGCAGGAGGGAGGAAAAACAGGGAGACTGAGCTGTGCTTTTGCCTGCTGTTGACTCGTCTTCTTGCTTGTGCAGTGACAACCTGAGACTGGATATCCGGACGGTATATGATTCCCTAGCAGACTAGCTGGACTTTTTCCTCCTCTTGGGATTTGTTTTGAGGTTTTCCTTCACACCTCTTTGGAATTACCGCTACAGGGATATCCCCGGCGTGAACGCGTGTGATGTGCCATGCCCATGCCTGCTAATCTTGTGGTCAGTGACTGGGGTAGACCATGAAGGGGGGCCACCACCATCGGGGCTGCGCCTGCCACCACTTGTTTCGGAAAGTCCTGGCAAAGTGCGGCTGCTGTTATGCCCGGGTCAGAGGGGGATTCGTCCGTGCCTCTTTTTCTATTGGTGCTCGCGCTCAGCTGGAGCAACAGATGTCTGTCACTTCTCCTGGTTACGGCTTCCCCTCACACTTTTCATCTCACTCCCCCTCTCAAAGGCGTGCACACGATTATCGGGTGGCAAGAACGGCGTGTGTGCATGTGCATGTGTATGTCATGCATTAGATGCAGTGTGTTTGCGTGTGCGACAGGGTGCCATGTGTTAAGGGGGGTTTTTGGAGGAGCACGTGGGTGGATGAAACTCTGGTGGCTGCACAGAAACATTCCTTCCCCTATTTAACACTGACTAATACGCTTTTTCCTATCTTTTTTGTTTGTCTCTCAAGATTGTCAGCCACCAGCTGAGGTTTCTATTGTGATAGTTGATCAATAAAATTAAAATTCATCTTCATTTACTTACCTTCATGTCATTTCAAACCCTTCTTTTTTTTATCTGTACAATGAAAGTCAGGTGGGTTTAATGTTGTTTTGGATCCCATTAACTTTCATTGTATGGACAAAATAAATGTTTGAAACATTCTTCGAAATATCTCCAATACAGAAGAAAGCAAGTCATACAGGTTTGGAATGACATATTTACATTTTGGCGGAACTATTCCTTTAATGTTGCAGTAGTGAGTTCAACTTTGAGTAAAATATTGCATGTTAAATGGTAGCTCCAAAGCAAAATGTCTTGCAATTACATCCACACAACTTTTTTGTGCTATATCCCATCTGTTTTGTATAATTTATGTAAAATACACTGCTTTAAAGCTTTCTTCGTGTGCTCTTTTATCATCGTTTCGACTCTGCGGGGCTCTGGCATAGTTCAGATGCTTCTAGTTTAATCTCCAGTGCTTATGTAATGGATATTCTTCCTCTGAGCCAGGGTATGTTCTTTCTACCTTCACTTTAGATAATCTACAACATCATTCTGAAATAATGTTGTTACAAGACCAAAATTTCAGTGATTGTTACCAATACCAGTAAAATAATTTTACGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10715529_10716091.mRNA True 1516 mRNA 0.44 2 10715114 10716910

Neighbor

gene id symbol gene type direction distance location
CI01000001_10694664_10713151 NA coding upstream 430 10694467 ~ 10714684 (+)
CI01000001_10688354_10691353 NA coding upstream 23705 10687862 ~ 10691409 (+)
CI01000001_10604980_10633286 KMT2D coding upstream 81574 10603888 ~ 10633540 (+)
CI01000001_10590766_10595793 DHH coding upstream 118876 10590436 ~ 10596238 (+)
CI01000001_10582439_10582802 NA coding upstream 132293 10582378 ~ 10582821 (+)
CI01000001_10749174_10779222 ARHGEF25A coding downstream 32264 10749174 ~ 10779454 (+)
CI01000001_10807407_10818870 SLC26A10 coding downstream 90410 10807320 ~ 10820053 (+)
CI01000001_10856786_10861403 C1GALT1A coding downstream 139050 10855960 ~ 10862138 (+)
CI01000001_10968536_10981345 NA coding downstream 251434 10968344 ~ 10981787 (+)
CI01000001_10989337_10992917 BIRC5B coding downstream 272427 10989337 ~ 10992978 (+)
G18998 NA non-coding upstream 57843 10655387 ~ 10657271 (+)
G19041 NA non-coding upstream 60192 10654569 ~ 10654922 (+)
G18997 NA non-coding upstream 115863 10599026 ~ 10599251 (+)
G19008 NA non-coding upstream 116300 10598604 ~ 10598814 (+)
G19009 NA non-coding upstream 128820 10585956 ~ 10586294 (+)
G19080 NA non-coding downstream 97480 10814390 ~ 10815702 (+)
G19087 NA non-coding downstream 157072 10873982 ~ 10874233 (+)
G19088 NA non-coding downstream 157760 10874670 ~ 10874871 (+)
G19034 NA non-coding downstream 175527 10892437 ~ 10896905 (+)
G19130 NA non-coding downstream 208618 10925528 ~ 10986466 (+)
CI01000001_10538498_10539667 RPS26 other upstream 175268 10538388 ~ 10539846 (+)
G18937 NA other upstream 238725 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 318409 10394851 ~ 10396705 (+)
G18872 NA other upstream 433745 10271146 ~ 10281369 (+)
G18873 NA other upstream 454400 10223879 ~ 10260714 (+)
G19039 NA other downstream 134014 10850924 ~ 10853983 (+)
G19314 NA other downstream 784284 11501194 ~ 11558673 (+)
G19395 NA other downstream 964412 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2796494 13514115 ~ 13517063 (+)

Expression


Co-expression Network