naprt (naprt,LOC107704039,LOC107669423)


Basic Information

Item Value
gene id naprt
gene name naprt,LOC107704039,LOC107669423
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24852469 ~ 24861840 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220235.1
CGGTGAAGAGCAGCAGGGCGGAGACCGAACACTAGTCATGTAACTGTGTAAAGGGTCACCCGGTTACACGTGAGCATGAGGGGGACGAGAGAGGCGCTGAAGGAAACCTGACAGGGAACAGCAACAGCCCTACTGAAAATGGCTACGCGCGAAGGCGGCGAGGCTGGCTCGGTGCTCGGCCGGGTGCCGCCGTTGCTCACGGACCTGTACCAGTTCACCATGGCGTACGCGTACTGGCGCGCGGGCAGGCACAACGAGCCGGCCGTGTTCGAGCTGTTCTTCCGCGACAACCCGTTCGGCGGAGGCTTCTCGCTCTTCGCGGGTCTCGGCGACTGCTTGCGCTTCCTGCAGAACTTCGCGTTCTCGGACGACGATGTGGAGTACCTGCGCTCGGTTCTCCCGGCGGGCACAGACGCGGCGTTCTTCTCGTATCTGAAGGGGCTGGACTGCTCGTGCGTGTCTGTGTCGGCGGTACCGGAGGGATCCGTGGTCTTCGCTCGAGTTCCTCTGCTGGAGGTGTCCGGGCCGCTGGCCGTGGTTCAGCTGCTGGAGACCAGTCTGCTCTGCCTGGTCAACTACGCCAGtctggTGTGTAGCAACGCTGCTCGTTTCCGTTTGGCTGCAGGTCCCAGGCGGAGATTGATGGAGATGGGGCTGAGGCGAGCTCAGGGTCCCGACGGGGGCCTGACCGCCTCACGGTACACGTACATCGGCGGTTTTGATCTGACGAGTAACGCCCTCGCCGGCCGTCTGTATGGCATTCCTGTGGCGGGAACCATGGCGCACTCTTATGTCACTTCCTTTTCCTCTCTGGAGGAGGTGTGGCCACAGACTCTGGTGCCCTGCGGCGGCGGCCGTCCTATTGACTTCATCTGTCTGGTGAAGGGTTGGTTGGGTCGCGTCTGTCAGATATTGGGGTCAAAGACGAGTCTGGTTCGGGAGGGAGAGCTGGCGGCCTTCCTGTCCTACGCCATCGCCTACCCACAAAACTTCCTGCCTGTCATCGACAGCTACAGCGTCAGCTGcAGCGgtctgctgtgtttctgtgcCGTGGCTCTGGCTCTCTCTGAGCTGCAGTATCGGCCGCTGGGCGTCAGGCTGGACAGCGGGGACCTCTGCAGACAGTCGCTGGAAGTGCGCCGCGTCTTCAGAGAATGTAGCAAACAGTTCTCAGTTCCTCAGTTCGAGTCTCTCATCATCGTCGGCACAAACAGTATTTCAGAACAGAGTCTCTCTGAACTCAACAAGAAAGATAATGAGATCGACGTGGTTGGAGTGGGCACTCATCTGGTCACGTGCACGCGTCAGCCCTCTCTGGGGTGTGTGTATAAGCTGGTGGAGGTCAGAGGTCGTCCCCGGATGAAGATGAGTGAAGATCCAGAGAAAAGCACGCTGCCCGGACGCAAGTCTGTCTATAGGCTTCTGGACGCAGACGGTCATCCTCAGATGGATCTGATCTGTCTGTCAGAAGAAGCGGCTCCCAAAGCGTCCGTCTCGCTGGCCTGCTTCCCGCTAGGACTGAACAAGACGCTCCAGACGGTCACTCCGGCTCGAGTGACCAGCCTGCGTCTGGATGTCTTCACCTGCGGACAGATCACATTCCCTCTGAGCGGTGCGTCGGAGAGCCGCGAGCGCGCACAGCTCTCTCTGCAAACGCTGCACGCTCATCACAAGAGACTGCAAGAGCCGCACGATTACACCGTGGCTTTATCGGAGCGGCTGCACTCCCTGGTGTCTGATGTCACGAAAGGAAACAGTAAAGGCAGCAACTTCCTGCTGTCGAACTGAAGCCGAGCCGAAACGTGGGGCAGAAGCGTTAGATCTTGAAGAAAAGATGCCTAAAAATcccgttttttaaaaaaaaagtcctgttAACAGATTCAGCGATGCTGCTTGTTGTGGTCCAATAACATTAACAAGCACTTTTGAATGTGGCATTGGTATTCATCTCTTGACTGACTAATAAAATAAGTGatgaagtaataaaaa

Function

symbol description
naprt Predicted to enable nicotinate phosphoribosyltransferase activity. Predicted to be involved in NAD salvage and response to oxidative stress. Predicted to act upstream of or within NAD biosynthetic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in several structures, including alar plate midbrain region; digestive system; midbrain; polster; and pronephric duct. Orthologous to human NAPRT (nicotinate phosphoribosyltransferase).

NR:

description
hypothetical protein EH28_16446

GO:

id name namespace
GO:0006979 response to oxidative stress biological_process
GO:0019358 nicotinate nucleotide salvage biological_process
GO:0009435 NAD biosynthetic process biological_process
GO:0005829 cytosol cellular_component
GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity molecular_function
GO:0004516 nicotinate phosphoribosyltransferase activity molecular_function
GO:0016874 ligase activity molecular_function

KEGG:

id description
K00763 pncB, NAPRT1; nicotinate phosphoribosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220235.1 True 1989 mRNA 0.58 13 24852469 24861840

Neighbor

gene id symbol gene type direction distance location
hlx1 hlx,hlx1,LOC107704027,LOC107567024,LOC107739182,LOC107728099 coding downstream 19479 24829849 ~ 24832990 (-)
mia3 mia3,LOC107739181,LOC107568205 coding downstream 131363 24699172 ~ 24721106 (-)
brox brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230 coding downstream 161380 24682627 ~ 24691089 (-)
LOC122324924 LOC107704029 coding downstream 169995 24678486 ~ 24682474 (-)
LOC122324925 LOC107559109,LOC107669446,LOC100330838,LOC107704031,LOC107568211,LOC107732492 coding downstream 174845 24674210 ~ 24677624 (-)
c20h8orf82 LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166 coding upstream 3619 24865459 ~ 24867178 (-)
tbc1d7 tbc1d7,LOC108443239,LOC108260306 coding upstream 214648 25076488 ~ 25085331 (-)
wu:fi04e12 LOC107739175,LOC107672942,LOC107567016,LOC107661358,LOC107728115 coding upstream 224330 25086170 ~ 25102714 (-)
LOC122325515 LOC107739175,LOC107661358,LOC107728115,LOC107672942,LOC107567016 coding upstream 242398 25104238 ~ 25116679 (-)
psmg4 LOC107671085,LOC107661364,LOC107739191,LOC107728114,LOC107572584 coding upstream 286302 25148142 ~ 25150522 (-)
G141684 NA non-coding downstream 31043 24821200 ~ 24821426 (-)
G141683 NA non-coding downstream 39313 24812825 ~ 24813156 (-)
G141682 NA non-coding downstream 53836 24794855 ~ 24798633 (-)
G141679 NA non-coding downstream 63565 24788672 ~ 24788904 (-)
G141676 NA non-coding downstream 75606 24776615 ~ 24776863 (-)
G141889 NA non-coding upstream 15908 24877748 ~ 24916483 (-)
G141899 NA non-coding upstream 74831 24936671 ~ 24947770 (-)
G141908 NA non-coding upstream 99414 24961254 ~ 24965553 (-)
G141911 NA non-coding upstream 156854 25018694 ~ 25022931 (-)
G141931 NA non-coding upstream 177852 25039692 ~ 25042258 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 690 24838652 ~ 24851779 (-)
G141651 NA other downstream 205048 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 320106 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 334726 24254393 ~ 24517743 (-)
G141502 NA other downstream 845804 24004687 ~ 24006665 (-)
mettl24 LOC107738893 other upstream 433004 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 464668 25326508 ~ 25377416 (-)
G142058 NA other upstream 786652 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 885827 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 1188989 26050829 ~ 26054469 (-)

Expression


Co-expression Network