myoc (myoc,LOC107669152,LOC107581474,LOC107712866,LOC107697243,LOC107733809)


Basic Information

Item Value
gene id myoc
gene name myoc,LOC107669152,LOC107581474,LOC107712866,LOC107697243,LOC107733809
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 8251452 ~ 8257991 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220257.1
TGTGCCTGGACTCAGAGAAACTGCCTCTAGACCTGAAGACACAAACTGTGGGATCGCAGGCATCAAAGCGAAACATCAACCACCAATCAAAGCGAGAAGCTCCAATCAGTCCCTCAACCAAGAGGAAGTCAGTGGGAACGGAAGATTGAATAGGCTCAGGTGAGAGGTCATTAGTGGAACGCAAGAGAAGTGAGCTGCTCCGGTTACACTTGTGAGGTAAAAGGGAAGGAATAGATTAGTGCTGGAGCTAAAGAAGACAGGGCAGTAGACTCACCACCACCTTCCCTGCAGAAAGAACATCagataaagacagaaagaagtTTTTTTGGGTATCTGTGGTCCAGCTGAACATGTGGTTTTTGGCTGTGTTTTGGGCTTCCTGCCTGCTGATGGGCACCCATGCTCAGAGTAGCACCAGTTTTCGCCGGGCGAATACCGGTAGTGGTCGTTGCCAGTACACCTTCACGGTGGACAGCCCCACAGAGGCAAGTTGTCCATCAGCAGGTTCAAGTCCCGAGATGGAGGCCCTGAAATCTCGCCTGGGGCTGTTAGAGGCACTGGTTGCCCGCCTCGTAGGAGGGGAAGCCGTGCCAGAGTTGTCACAGGGCTCCAGACCTCAGTCAGGCCTCCAGGATGCATATAACCAGATGATGGGGGAGAACACCCAGCTTCAGAGAGAGAAGCAAAAACTGGACAGACAGGTCCAGGACCTGCAGCAGAGGATGGAAGAGCTGCGCCAGGAGGCTGAGAGGTTGAGGAGCAGACCCTGCATGCAACAACCTCCTCCAAGAGTGCCCCAAAATGACAACAGCTTCAGACCAGGATCAGGACCTGCACTCTCCCACCTGGTATCAAGGCCTGGGAACACACAAGGAGACAAAGGCAGTTTAAGAGATCCTTCATGGCATTATGAGAATCCTGGATACCAGGAGCTGACGGCTGTAGTCACCGAGGTTTCTGCCCCAAGTCCGGAAGGTCCAGCGGACATCTCAGGTTGTGGCGATCTCGTGTGGGTACAAGAGCCTGAGGTGCACCGCAAGGCTGACAACATTGCTGGTAAATACGGCGTCTGGATGCAAGACCCAGAAGCTAAAGAACCTTACGGTACAGAGATGGTGTGGCGCATTGATGCCGTAGGTTCTGAAGTGCGTCAACTCTTCGGCTATGAAAACATGGACCAGCTGTCACGTGGCTTCCCCACTAAAGTCCTCCTCTTGCCAGAATTTATGGAGAGCACAGGCGCCACCATGTACAGAGGCTCCTTGTACTACCAACGGAGGCTCAGCCGCACCCTTGTAAGATACGATCTACTCTCTGAGAATATTGCTGCCCGCCGTGATCTTCCCCATGCTGGCTTCCATGGCCAATTCCCCTACTCTTGGGGAGGCTACACAGACATCGACTTGGCAATAGATGAGAACGGTCTATGGGCCATTTACAGCACCAACAAAGCCAAGGGTGCTATCGTCATCTCCCAGCTAGACCCTCACAACCTAGAGGTGAAGGGCACCTGGGAGACAAAAATCCGCAAGACATCCGTGGCTAATTCTTTTATGATCTGTGGCAAGCTGTACACTGTTGCTAGTTATACCTCACCAAACACCACCATAAATTACATGTATGACACCGCAACTAGCCAAGGTAAAACAATCGCAGTGCCATTCAAAAACCGCTATCGCTATAACAGCATGGTAGACTATAACCCAGCGCAGAGAAAGCTATATGCTTGGGATAACTTTTACATGGTATCTTATAATGTGAGATTAGGCAAGCAGGAGTAAAGTGAAGACAATGTAAATTTCTATATCACCCAGCTTATAGATGTGTATTGTAATGTTGTGATATTTTACCATCCGGAGGGATAGGTATTGTTGGATTTACTGGAATTTAAGACGAGGATAGACAACTGGACAAGAAATCAACTATAATTATGCTGATGACATTATTCCTAGCACCAGCAGTAggtatatataatgaataaagcaaatataacattttcctGACCATATTCAAGCACAAAGACTTCTTTGTAGACTTATTTTCAAGACAGATAGTAAATATACAACTGACTACACTGCACAtcttcacattaaaaaaatatttttgcatcttTAAATGCTATAAAAGATATTCCTTTGACTAATAAATTCCAAAATGGATAAACTATAGAGTATATCAGGTTTTTGAGGCCACATTTACGTCCTCTGATTTTGTCCACATAACATGTTAATAGAGAAATTATTTTTCTACCTTTTTAAGTATGTCtcgtctttttttgtgtttacggcactgagaaaaaaaaaaattcaagggGGAAAATATAATAGCATACAATTTATTACAGTAGGACTGCCTCTTGATTGATTTTCCAGAGGTATGCAActttaaaccaaaaaaactttGCTTGTTATGTTCATGCTCTAATCCATACATAATCATGCTATCGCAACTCTGTATATGTTGAACATTTTCCCTTCTCTTTTGAATTTGCCTCAAGACTTGTGTGCTGCTTGAGATGTTAAGTTTGGAATCTTAAGTGTATTAacttatatgaaaataaaaatttaaagtgtcggtttttcttgttttcctgCAATGCAGTGGTATTTTGATCAactcaaaaccaaaaacaccAACCACTGCTCATTTTTAcagcatattattttattagtttctgTAACCAAACCAGGAGAATGTAAATAAGAccttacatattttaatacagCGATTTAACCCCTGtacaagtaaaacaaaaacagaaatcaaaa
>XM_043220258.1
TGTGCCTGGACTCAGAGAAACTGCCTCTAGACCTGAAGACACAAACTGTGGGATCGCAGGCATCAAAGCGAAACATCAACCACCAATCAAAGCGAGAAGCTCCAATCAGTCCCTCAACCAAGAGGAAGTCAGTGGGAACGGAAGATTGAATAGGCTCAGGTGAGAGGTCATTAGTGGAACGCAAGAGAAGTGAGCTGCTCCGGTTACACTTGTGAGGTAAAAGGGAAGGAATAGATTAGTGCTGGAGCTAAAGAAGACAGGGCAGTAGACTCACCACCACCTTCCCTGCAGAAAGAACATCagataaagacagaaagaagtTTTTTTGGGTATCTGTGGTCCAGCTGAACATGTGGTTTTTGGCTGTGTTTTGGGCTTCCTGCCTGCTGATGGGCACCCATGCTCAGAGTAGCACCAGTTTTCGCCGGGCGAATACCGGTAGTGGTCGTTGCCAGTACACCTTCACGGTGGACAGCCCCACAGAGGCAAGTTGTCCATCAGCAGGTTCAAGTCCCGAGATGGAGGCCCTGAAATCTCGCCTGGGGCTGTTAGAGGCACTGGTTGCCCGCCTCGTAGGAGGGGAAGCCGTGCCAGAGTTGTCACAGGGCTCCAGACCTCAGTCAGGCCTCCAGGATGCATATAACCAGATGATGGGGGAGAACACCCAGCTTCAGAGAGAGAAGCAAAAACTGGACAGACAGGTCCAGGACCTGCAGCAGAGGATGGAAGAGCTGCGCCAGGAGGCTGAGAGGTTGAGGAGCAGACCCTGCATGCAACAACCTCCTCCAAGAGTGCCCCAAAATGACAACAGCTTCAGACCAGGATCAGATCCTTCATGGCATTATGAGAATCCTGGATACCAGGAGCTGACGGCTGTAGTCACCGAGGTTTCTGCCCCAAGTCCGGAAGGTCCAGCGGACATCTCAGGTTGTGGCGATCTCGTGTGGGTACAAGAGCCTGAGGTGCACCGCAAGGCTGACAACATTGCTGGTAAATACGGCGTCTGGATGCAAGACCCAGAAGCTAAAGAACCTTACGGTACAGAGATGGTGTGGCGCATTGATGCCGTAGGTTCTGAAGTGCGTCAACTCTTCGGCTATGAAAACATGGACCAGCTGTCACGTGGCTTCCCCACTAAAGTCCTCCTCTTGCCAGAATTTATGGAGAGCACAGGCGCCACCATGTACAGAGGCTCCTTGTACTACCAACGGAGGCTCAGCCGCACCCTTGTAAGATACGATCTACTCTCTGAGAATATTGCTGCCCGCCGTGATCTTCCCCATGCTGGCTTCCATGGCCAATTCCCCTACTCTTGGGGAGGCTACACAGACATCGACTTGGCAATAGATGAGAACGGTCTATGGGCCATTTACAGCACCAACAAAGCCAAGGGTGCTATCGTCATCTCCCAGCTAGACCCTCACAACCTAGAGGTGAAGGGCACCTGGGAGACAAAAATCCGCAAGACATCCGTGGCTAATTCTTTTATGATCTGTGGCAAGCTGTACACTGTTGCTAGTTATACCTCACCAAACACCACCATAAATTACATGTATGACACCGCAACTAGCCAAGGTAAAACAATCGCAGTGCCATTCAAAAACCGCTATCGCTATAACAGCATGGTAGACTATAACCCAGCGCAGAGAAAGCTATATGCTTGGGATAACTTTTACATGGTATCTTATAATGTGAGATTAGGCAAGCAGGAGTAAAGTGAAGACAATGTAAATTTCTATATCACCCAGCTTATAGATGTGTATTGTAATGTTGTGATATTTTACCATCCGGAGGGATAGGTATTGTTGGATTTACTGGAATTTAAGACGAGGATAGACAACTGGACAAGAAATCAACTATAATTATGCTGATGACATTATTCCTAGCACCAGCAGTAggtatatataatgaataaagcaaatataacattttcctGACCATATTCAAGCACAAAGACTTCTTTGTAGACTTATTTTCAAGACAGATAGTAAATATACAACTGACTACACTGCACAtcttcacattaaaaaaatatttttgcatcttTAAATGCTATAAAAGATATTCCTTTGACTAATAAATTCCAAAATGGATAAACTATAGAGTATATCAGGTTTTTGAGGCCACATTTACGTCCTCTGATTTTGTCCACATAACATGTTAATAGAGAAATTATTTTTCTACCTTTTTAAGTATGTCtcgtctttttttgtgtttacggcactgagaaaaaaaaaaattcaagggGGAAAATATAATAGCATACAATTTATTACAGTAGGACTGCCTCTTGATTGATTTTCCAGAGGTATGCAActttaaaccaaaaaaactttGCTTGTTATGTTCATGCTCTAATCCATACATAATCATGCTATCGCAACTCTGTATATGTTGAACATTTTCCCTTCTCTTTTGAATTTGCCTCAAGACTTGTGTGCTGCTTGAGATGTTAAGTTTGGAATCTTAAGTGTATTAacttatatgaaaataaaaatttaaagtgtcggtttttcttgttttcctgCAATGCAGTGGTATTTTGATCAactcaaaaccaaaaacaccAACCACTGCTCATTTTTAcagcatattattttattagtttctgTAACCAAACCAGGAGAATGTAAATAAGAccttacatattttaatacagCGATTTAACCCCTGtacaagtaaaacaaaaacagaaatcaaaa

Function

symbol description
myoc Predicted to act upstream of or within positive regulation of cell migration; regulation of cell-matrix adhesion; and regulation of stress fiber assembly. Predicted to be located in several cellular components, including extracellular space; mitochondrial outer membrane; and rough endoplasmic reticulum. Is expressed in caudal fin skeleton; eye; and postcranial axial skeleton. Human ortholog(s) of this gene implicated in juvenile glaucoma; low tension glaucoma; ocular hypertension; open-angle glaucoma; and primary open angle glaucoma. Orthologous to human MYOC (myocilin).

NR:

description
myocilin-like

GO: NA

KEGG:

id description
K23027 MYOC; myocilin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220257.1 True 2768 mRNA 0.44 4 8251452 8257991
XM_043220258.1 False 2702 mRNA 0.44 3 8251452 8257991

Neighbor

gene id symbol gene type direction distance location
prdx6 prdx6,LOC107712864,LOC107597803 coding downstream 116421 8130352 ~ 8135031 (-)
jun jun,LOC107712863,LOC107581481,LOC107739852 coding downstream 250921 7998591 ~ 8000531 (-)
LOC122324580 si:dkey-86e18.2,LOC107658157,LOC107739861,LOC107597817 coding downstream 255014 7992597 ~ 7996438 (-)
si:dkey-86e18.1 LOC107739858,LOC107658158,LOC107597818,LOC102784436,LOC103354166,LOC102300794 coding downstream 259143 7985891 ~ 7992309 (-)
faslg LOC107581522,LOC107669138,LOC107712839 coding downstream 268402 7980679 ~ 7983050 (-)
vamp4 vamp4,LOC107712870,LOC107733808 coding upstream 3767 8261758 ~ 8271223 (-)
itpa itpa,LOC107712840 coding upstream 26051 8284042 ~ 8287245 (-)
tmed5 tmed5,LOC107733818,LOC107597813,LOC107712842,LOC107581519,LOC108415774 coding upstream 78616 8336607 ~ 8340950 (-)
LOC122324856 LOC107733811 coding upstream 144808 8402799 ~ 8408257 (-)
LOC122325066 LOC107687338,LOC107597794,LOC107728091,LOC107712844,LOC107581495 coding upstream 314561 8572552 ~ 8591185 (-)
G136909 NA non-coding downstream 43508 8202900 ~ 8207944 (-)
LOC122325257 NA non-coding downstream 68793 8153665 ~ 8182659 (-)
G136804 NA non-coding downstream 338888 7912148 ~ 7912564 (-)
G136792 NA non-coding downstream 358127 7890258 ~ 7893325 (-)
G136763 NA non-coding downstream 469219 7677116 ~ 7782233 (-)
G136935 NA non-coding upstream 3092 8261083 ~ 8261292 (-)
LOC122325283 NA non-coding upstream 53500 8311491 ~ 8313967 (-)
G136962 LOC107687343,LOC107581497,LOC107697261,LOC107712873,LOC107597796 non-coding upstream 117494 8375485 ~ 8637526 (-)
G137053 NA non-coding upstream 492556 8750547 ~ 8750798 (-)
G137057 NA non-coding upstream 563800 8821791 ~ 8822181 (-)
zyg11 zyg11,zyg11b,LOC107712854,LOC107669142,LOC107658153,LOC107721807 other downstream 451863 7785602 ~ 7799589 (-)
G136754 zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807 other downstream 555387 7693955 ~ 7696065 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other downstream 649850 7544356 ~ 7601602 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other downstream 814954 7432060 ~ 7436498 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other downstream 822170 7424836 ~ 7429282 (-)
pigc pigc,LOC107581520,LOC107669155,LOC107712841,LOC107697628,LOC107597814 other upstream 65122 8323113 ~ 8644759 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other upstream 333701 8591692 ~ 8600955 (-)
G137054 LOC107660256,LOC107566921 other upstream 560863 8818854 ~ 8819327 (-)
G137056 NA other upstream 563163 8821154 ~ 8821719 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other upstream 997557 9255548 ~ 9283383 (-)

Expression


Co-expression Network