glrx5 (glrx5,LOC107752683,LOC107664827,LOC107747371)


Basic Information

Item Value
gene id glrx5
gene name glrx5,LOC107752683,LOC107664827,LOC107747371
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 6467779 ~ 6470069 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220304.1
AACCCAATAACGTTCGATCTTGGAGTGTTTATACTCGAGGGGGCGGTGCTTGAGTCCCGTGAGTTTCTTCGAGGCGCTGTGGCGTTTGTTAGGCGAAGTGTCAAGCGCACGTAAGCCTCTTTAAATCGTCAGCAAACCCTTCAGACTTGCACGATGAACAGCGTTATTAGATCGGCAGCTCGTTGTCTTCGAGCGAGCGCGTGGCAGTACAGACCAGCGCAGAATAACGGAGAGCTGCTGTCCGGTCGGGCCCGCCTCATGTGCTCCTCCTCAGCGGTGCTGAAGACTCTGGAGGAGATCGTGAAGAAGGACAAAGTGGTGGTCTTCATGAAAGGCACCCCGGCACAGCCTATGTGCGGCTTCAGCAACGCCGTGGTCCAGATCCTCAGGATGCATGGGGTCGACGGCTATGCTTCTTACAACGTGCTGGACGACCAGGATATCAGACAAGGAATAAAGACTTTATCCAACTGGCCGACGATTCCTCAGGTGTTCTTCAACGGAGAGTTTGTTGGCGGCTGCGACATTCTTCTTCAGATGCATCAGAGCGGAGATCTGGTAGAGGAACTTCAGAAGCTGGGGATCAGATCGGCTCTCCTGGATCAGGAGAAGGAGTCCAAGTAGGAGACTTCGGGATGACTGTCCATCGGGAACCCCCCGAAGGTCGACTCGCGAAGAGTGACTTGACCTGCTGAAGACCAAACTGTCCTCGGATGACTGAAGGAAGTGATGTCGATCCTCCCAGATTCTGAAAAATCACTGTAAAACACTTGACTTAGAGTCGCCGTATTACACATGATGACATTTATATTGCAGTACGCTCGTCTCCGTTTCAGATACTCCAATGTTAGACCgctgcatatttaaaatgttgtattttcagatatattataaaatgtattttaggtgTATatcgttttttgtttgtcaataaaatattttgaagcacC

Function

symbol description
glrx5 Predicted to enable 2 iron, 2 sulfur cluster binding activity; metal ion binding activity; and protein-disulfide reductase activity. Acts upstream of or within hemopoiesis and iron-sulfur cluster assembly. Located in mitochondrion. Is expressed in cardiovascular system; immature eye; intermediate cell mass of mesoderm; and liver. Human ortholog(s) of this gene implicated in autosomal recessive pyridoxine-refractory sideroblastic anemia 3. Orthologous to human GLRX5 (glutaredoxin 5).

NR:

description
Glutaredoxin-related protein 5

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0045454 cell redox homeostasis biological_process
GO:0016226 iron-sulfur cluster assembly biological_process
GO:0005739 mitochondrion cellular_component
GO:0046872 metal ion binding molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K07390 grxD, GLRX5; monothiol glutaredoxin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220304.1 True 950 mRNA 0.49 2 6467779 6470069

Neighbor

gene id symbol gene type direction distance location
meis2b meis2b,LOC107664830,LOC107668148,LOC107582109,LOC107712444,LOC104938729,LOC105017579 coding downstream 99024 6350830 ~ 6368755 (-)
actc2 zgc:86709,actc1,ACTC1,actc1a,LOC108414322,LOC105024319 coding downstream 146500 6317799 ~ 6321279 (-)
gjd2b gjd2b,LOC107740303,LOC107582173,LOC107549543,LOC105892965,LOC107582146,LOC107712441 coding downstream 151965 6312330 ~ 6315814 (-)
cgrrf1 cgrrf1,LOC107740293,LOC107664817,LOC107712438,LOC107582104 coding downstream 210332 6254715 ~ 6257447 (-)
nid2b LOC107712413,LOC107549538,LOC107549503 coding downstream 235112 6218511 ~ 6232667 (-)
flrt2 flrt2,LOC107752686,LOC107664820,LOC107564782,LOC107701229,LOC107570088,LOC107706955 coding upstream 203161 6673230 ~ 6708654 (-)
LOC122325354 LOC107742115,LOC107664810 coding upstream 651282 7121351 ~ 7124683 (-)
LOC122325011 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding upstream 686198 7156267 ~ 7158619 (-)
LOC122325548 LOC107742115,LOC107664810 coding upstream 752567 7222636 ~ 7225982 (-)
LOC122325143 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding upstream 785430 7255499 ~ 7257574 (-)
G136506 NA non-coding downstream 69669 6383432 ~ 6398110 (-)
G136440 NA non-coding downstream 220888 6246263 ~ 6246891 (-)
G136416 NA non-coding downstream 262341 6205090 ~ 6205438 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding downstream 322118 6128498 ~ 6145661 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding downstream 417146 6048968 ~ 6050633 (-)
G136689 LOC107581525,LOC107742114,LOC107664807,LOC107658183,LOC107721806,LOC107597854,LOC107737069 non-coding upstream 657144 7127213 ~ 7130585 (-)
LOC122324389 NA non-coding upstream 663679 7133748 ~ 7139291 (-)
G136694 psma6b,psma6a,psma6,LOC107580710,LOC107664826,LOC107693094 non-coding upstream 681321 7151390 ~ 7151754 (-)
G136696 LOC108231735,LOC107396026,LOC107597861 non-coding upstream 682399 7152468 ~ 7251872 (-)
G136716 NA non-coding upstream 811303 7281372 ~ 7281804 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other downstream 16280 6432762 ~ 6451499 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other downstream 53766 6410962 ~ 6414013 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other downstream 164803 6274754 ~ 6302976 (-)
zpax2 NA other downstream 536657 5924066 ~ 5931122 (-)
G136357 NA other downstream 763868 5701679 ~ 5703911 (-)
G136688 NA other upstream 655679 7125748 ~ 7228963 (-)
G136707 NA other upstream 826792 7296861 ~ 7305724 (-)
LOC122324874 tmem30ab,LOC107721815,LOC107714749,LOC107658180,LOC107597847,LOC107664818,LOC107581488 other upstream 865319 7335388 ~ 7340455 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other upstream 954767 7424836 ~ 7429282 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other upstream 961991 7432060 ~ 7436498 (-)

Expression


Co-expression Network