hsp90aa1.2 (LOC100701982,LOC102800076,LOC107378075,LOC103155532,LOC103457915,LOC105909576)


Basic Information

Item Value
gene id hsp90aa1.2
gene name LOC100701982,LOC102800076,LOC107378075,LOC103155532,LOC103457915,LOC105909576
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25597113 ~ 25609145 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220306.1
ATTTCTGGAGCGTCCGCGTTCTCGAACTCTCCCGTCAGGACGTATAAAAGCGCGCCGCCGGCGTGACGCACGCGACAGGCTCTCCCGAAGCTCAGTGACAGCTGAGGAGGAGAAACCTCACGGGCTTAAATCAAATTCGCTTTAATAAACCCGTCAAGATGCCGGAGGCAAATGACCAGCCGATGGAGGAGGAAGCGGAGACCTTCGCCTTCCAGGCTGAGATCGCTCAGCTGATGTCTCTGATCATCAACACTTTCTATTCCAACAAAGAGATCTTCCTCAGGGAGCTCATCTCCAACTCTTCAGACGCTTTGGACAAAATCCGCTACGAGAGCCTCACAGACCCGAGCAAGCTGGACTCGGGGAAAGACCTCAAAATCGAAATCATCCCCGACAAGCAGGAGCGCACGCTGACCATCGTGGACACCGGCATTGGCATGACCAAAGCGGACCTCATCAACAACCTGGGCACCATCGCCAAGTCCGGCACCAAGGCCTTCATGGAGGCTCTGCAGGCCGGAGCGGACATTTCCATGATCGGTCAGTTCGGAGTGGGCTTCTATTCGGCCTACCTGGTGGCCGAGAAAGTGACGGTCATCACCAAACACAACGACGACGAGCAGTACGCCTGGGAGTCTTCGGCTGGGGGATCGTTCACCGTTAAAGTGGACAGCTCCGAGCCGATCGGTCGTGGCACAAAAGTGATTCTGCATCTGAAGGAGGATCAGACGGAGTACATCGAAGAGCGGCGGATCAAAGAGATCGTCAAGAAGCACTCGCAGTTCATCGGCTACCCCATCACGCTCTTCGTGGAGAAGGAGCGCGACAAGGAGGTGAGCGACGACGAGgcggaggaggagaaggagaaagagaaggaggaggaggagggagagaagGACGAAGACAAGCCCGAGATCGAAGACGTGGGCTCAGACGACGAGGACCACGACGACAAGTGCTCcgacaagaagaagaagaagaagatcaaGGAGAAGTACATCGACCAGGAGGAGCTCAACAAGACCAAGCCCCTGTGGACCCGAAACCCCGATGACATCACCAACGAGGAGTACGGCGAGTTCTACAAGAGTCTGACCAACGACTGGGAGGACCACCTGGCGGTCAAGCACTTCTCAGTGGAGGGCCAGCTGGAGTTCCGCGCGCTGCTCTTCGTGCCTCGCCGAGCTCCCTTCGATCTCTTCgagaacaagaagaagaagaacaacatCAAGCTGTACGTGCGCAGGGTCTTCATCATGGACAACTGCGACGAGCTCATCCCAGAATACCTCAACTTCATCAAGGGCGTGGTGGACTCCGAGGATCTGCCGCTCAACATCTCCAGAGAGATGCTTCAGCAGAGCAAGATCCTGAAGGTCATCCGCAAGAACCTGGTCAAGAAGTGCCTGGAGCTCTTCACCGAACTCTCCGAGGACAAAGAGAACTACAAGAAGTTCTACGAGCAGTTCTCCAAGAACATCAAGCTGGGCATCCACGAAGACTCTCAGAACAGGAAGAAGCTCTCCGAGCTGCTCCGCTATTACACATCGGCTTCTGGAGACGAGATGGTGTCCCTCAAAGACTACGTGACTCGAATGAAGGACACGCAGAAGCACATCTACTACATCACCGGTGAGACCAAAGATCAGGTGGCCAACTCTGCTTTCGTGGAGCGTCTGCGCAaagctggtctggaggtgatctaCATGATCGAGCCCATCGACGAATACTGCGTCCAGCAGCTGAAGGAGTTCGAGGGCAAGAACCTGGTCTCGGTGACCAAGGAGGGTCTGGAGCTGCccgaggatgaggaggagaagaagaagcagGAAGAGAAGAAGGCCAGGTTTGAGAACCTGTGCAAGATCATGAAAGACATCCTGGAGAAGAAAGTCGAGAAGGTCACCGTCTCAAACCGCCTGGTTTCGTCGCCCTGCTGCATCGTCACGAGCACATACGGCTGGACGGCCAACATGGAGAGGATCATGAAGGCCCAGGCCCTGAGGGACAACTCCACCATGGGCTACATGGCGGCCAAGAAGCACCTGGAGGTCAACCCCGATCACCCCATCGTCGAGACGCTCCGCCAGAAAGCGGAGGCCGACAAGAACGACAAGTCAGTGAAGGACCTGGTGATCCTGCTGTTCGAGACGGCGCTGCTCTCCTCGGGCTTCACGCTGGACGACCCACAGACGCACTCCAACCGCATCTACAGGATGATCAAACTCGGGCTCGGCATCGACGAGGACGATCTGTCCCCAGAGGAGCCCAGCGCGGCTCCGGTCGAGGACATGCCTCCGCTGGAGGGAGACGACGACGCGTCCCGCATGGAGGAGGTCGACTGAGACGCCGCGCCGCTGTCTGTAGCTCTGTAAAAACATCCCGTTGTTCATAGCTCTCGTCGTTCCTCGCAGTTCCCGTTCATTCCCGTTCGGTCGGCAAAGCTTTCGGGAAACGTCTCGTCGTCCCACATTCcctatttttttgtactttttatttttttgagttgTGCTtcgttttgtatttattgattaacGTTATGATGTTGATTTTGAGTTCATTAAGGGACACAGGTACTGTATTATTAACGTGACGGGATCCTGAAATAAAGCTTGCCATATCAGA
>XM_043220307.1
TTCGCCTTCCAGGCTGAGATCGCTCAGCTGATGTCTCTGATCATCAACACTTTCTATTCCAACAAAGAGATCTTCCTCAGGGAGCTCATCTCCAACTCTTCAGACGTGCGTAACCGTGTACTACATGGTTGAGTAACGGCTTTGGACAAAATCCGCTACGAGAGCCTCACAGACCCGAGCAAGCTGGACTCGGGGAAAGACCTCAAAATCGAAATCATCCCCGACAAGCAGGAGCGCACGCTGACCATCGTGGACACCGGCATTGGCATGACCAAAGCGGACCTCATCAACAACCTGGGCACCATCGCCAAGTCCGGCACCAAGGCCTTCATGGAGGCTCTGCAGGCCGGAGCGGACATTTCCATGATCGGTCAGTTCGGAGTGGGCTTCTATTCGGCCTACCTGGTGGCCGAGAAAGTGACGGTCATCACCAAACACAACGACGACGAGCAGTACGCCTGGGAGTCTTCGGCTGGGGGATCGTTCACCGTTAAAGTGGACAGCTCCGAGCCGATCGGTCGTGGCACAAAAGTGATTCTGCATCTGAAGGAGGATCAGACGGAGTACATCGAAGAGCGGCGGATCAAAGAGATCGTCAAGAAGCACTCGCAGTTCATCGGCTACCCCATCACGCTCTTCGTGGAGAAGGAGCGCGACAAGGAGGTGAGCGACGACGAGgcggaggaggagaaggagaaagagaaggaggaggaggagggagagaagGACGAAGACAAGCCCGAGATCGAAGACGTGGGCTCAGACGACGAGGACCACGACGACAAGTGCTCcgacaagaagaagaagaagaagatcaaGGAGAAGTACATCGACCAGGAGGAGCTCAACAAGACCAAGCCCCTGTGGACCCGAAACCCCGATGACATCACCAACGAGGAGTACGGCGAGTTCTACAAGAGTCTGACCAACGACTGGGAGGACCACCTGGCGGTCAAGCACTTCTCAGTGGAGGGCCAGCTGGAGTTCCGCGCGCTGCTCTTCGTGCCTCGCCGAGCTCCCTTCGATCTCTTCgagaacaagaagaagaagaacaacatCAAGCTGTACGTGCGCAGGGTCTTCATCATGGACAACTGCGACGAGCTCATCCCAGAATACCTCAACTTCATCAAGGGCGTGGTGGACTCCGAGGATCTGCCGCTCAACATCTCCAGAGAGATGCTTCAGCAGAGCAAGATCCTGAAGGTCATCCGCAAGAACCTGGTCAAGAAGTGCCTGGAGCTCTTCACCGAACTCTCCGAGGACAAAGAGAACTACAAGAAGTTCTACGAGCAGTTCTCCAAGAACATCAAGCTGGGCATCCACGAAGACTCTCAGAACAGGAAGAAGCTCTCCGAGCTGCTCCGCTATTACACATCGGCTTCTGGAGACGAGATGGTGTCCCTCAAAGACTACGTGACTCGAATGAAGGACACGCAGAAGCACATCTACTACATCACCGGTGAGACCAAAGATCAGGTGGCCAACTCTGCTTTCGTGGAGCGTCTGCGCAaagctggtctggaggtgatctaCATGATCGAGCCCATCGACGAATACTGCGTCCAGCAGCTGAAGGAGTTCGAGGGCAAGAACCTGGTCTCGGTGACCAAGGAGGGTCTGGAGCTGCccgaggatgaggaggagaagaagaagcagGAAGAGAAGAAGGCCAGGTTTGAGAACCTGTGCAAGATCATGAAAGACATCCTGGAGAAGAAAGTCGAGAAGGTCACCGTCTCAAACCGCCTGGTTTCGTCGCCCTGCTGCATCGTCACGAGCACATACGGCTGGACGGCCAACATGGAGAGGATCATGAAGGCCCAGGCCCTGAGGGACAACTCCACCATGGGCTACATGGCGGCCAAGAAGCACCTGGAGGTCAACCCCGATCACCCCATCGTCGAGACGCTCCGCCAGAAAGCGGAGGCCGACAAGAACGACAAGTCAGTGAAGGACCTGGTGATCCTGCTGTTCGAGACGGCGCTGCTCTCCTCGGGCTTCACGCTGGACGACCCACAGACGCACTCCAACCGCATCTACAGGATGATCAAACTCGGGCTCGGCATCGACGAGGACGATCTGTCCCCAGAGGAGCCCAGCGCGGCTCCGGTCGAGGACATGCCTCCGCTGGAGGGAGACGACGACGCGTCCCGCATGGAGGAGGTCGACTGAGACGCCGCGCCGCTGTCTGTAGCTCTGTAAAAACATCCCGTTGTTCATAGCTCTCGTCGTTCCTCGCAGTTCCCGTTCATTCCCGTTCGGTCGGCAAAGCTTTCGGGAAACGTCTCGTCGTCCCACATTCcctatttttttgtactttttatttttttgagttgTGCTtcgttttgtatttattgattaacGTTATGATGTTGATTTTGAGTTCATTAAGGGACACAGGTACTGTATTATTAACGTGACGGGATCCTGAAATAAAGCTTGCCATATCAGA

Function

NR:

description
PREDICTED: heat shock protein HSP 90-alpha

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006457 protein folding biological_process
GO:0005524 ATP binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K04079 HSP90A, htpG; molecular chaperone HtpG

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220306.1 True 2625 mRNA 0.55 11 25597113 25609145
XM_043220307.1 False 2455 mRNA 0.55 10 25597113 25608146

Neighbor

gene id symbol gene type direction distance location
ppp2r5cb ppp2r5cb,LOC107704375,LOC108411434,LOC103025090,LOC108257814,LOC103369946 coding downstream 929 25576029 ~ 25596184 (-)
LOC122325309 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 coding downstream 35872 25470782 ~ 25561241 (-)
gata4 gata4,LOC107671084,LOC107739180,LOC107557004,LOC107661355,LOC107728131,LOC107564601 coding downstream 374033 25212806 ~ 25223080 (-)
fdft1 fdft1,LOC107661354,LOC107671088 coding downstream 385517 25202241 ~ 25211596 (-)
ctsbb ctsbb,LOC107557005,LOC107661356 coding downstream 398182 25190559 ~ 25198931 (-)
hsp90aa1.1 hsp90aa1.1,LOC107704377,LOC107557012,LOC107564585,LOC103024454,LOC106533044 coding upstream 171 25609316 ~ 25615276 (-)
LOC122325306 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding upstream 17507 25626652 ~ 25630935 (-)
trnas-gcu_30 NA coding upstream 24715 25633860 ~ 25633943 (-)
LOC122325519 plcb1,LOC107663155,LOC108423552,LOC103033987,LOC107678738,LOC107728323 coding upstream 145355 25754500 ~ 25776163 (-)
pak5 pak5,LOC107659820,LOC107731598 coding upstream 279024 25888169 ~ 25935072 (-)
G142015 NA non-coding downstream 301 25474206 ~ 25596812 (-)
G142042 NA non-coding downstream 17852 25514247 ~ 25579261 (-)
G142016 NA non-coding downstream 69152 25523201 ~ 25527961 (-)
G142026 NA non-coding downstream 137881 25457409 ~ 25459232 (-)
G142009 NA non-coding downstream 165427 25430799 ~ 25431686 (-)
G142201 plcb4,LOC107557901,LOC106608066,LOC107659823,LOC107564330 non-coding upstream 229227 25838372 ~ 25865079 (-)
G142260 NA non-coding upstream 397124 26006269 ~ 26010388 (-)
G142261 NA non-coding upstream 401505 26010650 ~ 26012248 (-)
G142245 NA non-coding upstream 408226 26017371 ~ 26033198 (-)
G142242 NA non-coding upstream 409574 26018719 ~ 26055565 (-)
mettl24 LOC107738893 other downstream 188338 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 219697 25326508 ~ 25377416 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 745334 24838652 ~ 24851779 (-)
G141651 NA other downstream 949692 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 1064750 24524069 ~ 24532363 (-)
G142058 NA other upstream 39347 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 138522 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 441684 26050829 ~ 26054469 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other upstream 479270 26088415 ~ 26096971 (-)
G142281 NA other upstream 576515 26185660 ~ 26187919 (-)

Expression


Co-expression Network