LOC122325330


Basic Information

Item Value
gene id LOC122325330
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26307401 ~ 26307812 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220345.1
ACCTGAAGAGTGCAAAAAGACCAAACGCCAGCTTCTGCACAGTGTGCCTGTCTGTTCAATCATGGTTGTCAGATGGTTGTTGGTTGAGATTTTAGCACTTTGTGCTCTCTGTAATGCTGTTCCTCAGTGGAGTAATCTGCCCCAGAGTCCTCAGAAGGTTCAGCAGCTGGTTCAACGACAGCCACCCAGCCAGAAGGTTCAGCAGCCACAAcaacagccacccagccagAAGGTTCAGCAGCCACAAcaacagccacccagccagAAGGTTCAGCAACCACAAcaacagccacccagccagcaggataagcagccggttcaacagcagccacccagccagcaggataagcagccggttcaacagcagccacccagccagtgggttaagcagccagttcaagaacagcagcca

Function

GO:

id name namespace
GO:0008406 gonad development biological_process
GO:0045137 development of primary sexual characteristics biological_process
GO:0007548 sex differentiation biological_process
GO:0061458 reproductive system development biological_process
GO:0048608 reproductive structure development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220345.1 True 412 mRNA 0.54 1 26307401 26307812

Neighbor

gene id symbol gene type direction distance location
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding downstream 5526 26299497 ~ 26301875 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding downstream 15245 26289769 ~ 26292156 (-)
LOC122324888 NA coding downstream 19154 26287837 ~ 26288247 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding downstream 19796 26285813 ~ 26287605 (-)
fkbp3 fkbp3,LOC107717646 coding downstream 64577 26235419 ~ 26242824 (-)
LOC122325425 mdga2,LOC107704381,LOC107556994,LOC108257548,LOC108411484,LOC106571582,LOC106608140 coding upstream 17419 26325231 ~ 26439923 (-)
LOC122325332 wdr20,LOC107730607,LOC107564583,LOC107704379 coding upstream 261955 26569767 ~ 26574013 (-)
trnas-gcu_32 NA coding upstream 306831 26614643 ~ 26614730 (-)
ganaba zgc:171967,LOC107662060,LOC107702959,LOC107722752,LOC107548499,LOC108427707 coding upstream 618421 26926233 ~ 26940284 (-)
her7 LOC107548512,LOC107662101,LOC107740036,LOC107556023,LOC107722746,LOC107702916 coding upstream 639518 26947330 ~ 26948895 (-)
G142299 NA non-coding downstream 37357 26269637 ~ 26270044 (-)
G142297 NA non-coding downstream 39276 26267912 ~ 26268125 (-)
G142280 NA non-coding downstream 75918 26230306 ~ 26231483 (-)
G142282 NA non-coding downstream 115483 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 132522 26149891 ~ 26174879 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 3399 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 12058 26319870 ~ 26320141 (-)
G142349 NA non-coding upstream 56207 26364019 ~ 26381273 (-)
G142354 NA non-coding upstream 164545 26472357 ~ 26472760 (-)
G142355 LOC102197881 non-coding upstream 170739 26478551 ~ 26479196 (-)
G142278 NA other downstream 73156 26232024 ~ 26234245 (-)
G142281 NA other downstream 119482 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 210430 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 252932 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 553393 25747667 ~ 25754008 (-)
rps29 NA other upstream 175509 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 615003 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 921991 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1168282 27476094 ~ 27478227 (-)

Expression


Co-expression Network