LOC122325331 (taar12i,taar12j,LOC107733377,LOC107550395,LOC107756662,LOC107756663,LOC107550380,LOC107697080,LOC107550381)


Basic Information

Item Value
gene id LOC122325331
gene name taar12i,taar12j,LOC107733377,LOC107550395,LOC107756662,LOC107756663,LOC107550380,LOC107697080,LOC107550381
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21924156 ~ 21925178 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220346.1
ATGACTTTTAATGAGACCGCTATTTACtttgaaaatatgtttctttGTTATCCACTTCTGCCAAACTCATGTCTGAAGCTGCAGCGTCTTACTGTAGTAAAAGTGACTATGTATGTTTTGATGGTGCTGATGATCCTCACAACAGTTTTTGGGAACCTGCTGAtcatcatctccatctctcacttcaAACAGCTTCAGTCTCCAACTCATCTGATCATTCGCTCTCTGGCTACTAGTGACTGTCTGCTGGGCTCTTTGGTCATGCCGTACAGCATGGTGCGATCTGTTGAAGGCTGCTGGTATCTGGGAGATGTTGTGTGTAAAGTTCATTCTAGTTTAGACATGACTTTTTGTATCTCCTCCTTAATGCATCTCAGTTTAATATCTGTTGACAGGTACATGGCCATTTGTGACCCTCTGAGATACAGAATGAGGGTCACAAACAACACTGTGACTGTATTTACAACACTAACAtggctgttttcatttttctacagtttttctattgtgttttcaGGTGTAAACAAAATTGGTTTGGAGTCATTCATTATGCAGGTGTATTGTGTGGgaagctgtgttttgttttttaacaaacaatGGGGCATTATATGTCCAATTCTCACATTCTTTCTTTCTGGGACGATCATGAGCTCTCTGTATATAAAAATCTTCCATGTTGCACGAAAACATGCAAAGATTATGTCAGAAAGAGTGACTGGAGGGATGAAGAGTCAAAGCTCTgctcacagagagagaaaagcagctAAAGCTCTGGCGATTGTCATGGGTGTTTTCTTGTTCTGCTGGCTGCCCATTTTTATTGCAACTATCATCGACTCTTTCCTTAATTTCGTGACTCCCGGTGATGTTTTTGATGCATTGGTGTGGTTTGGATACTTAAACTCTACTTGTAATCCATTGATCTATGGGTTTTTCTACACTCGCTTTCAGAAGGCCTTTAAAATTCTTATATTGTCCTGTATATATGGCTTTAGTGACCTAAGCACCTGGacatttgaatga

Function

symbol description
taar12i Enables trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR3P (trace amine associated receptor 3, pseudogene).
taar12j Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR3P (trace amine associated receptor 3, pseudogene).

NR:

description
PREDICTED: trace amine-associated receptor 4-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220346.1 True 1023 mRNA 0.40 1 21924156 21925178

Neighbor

gene id symbol gene type direction distance location
taar1b LOC107733378,LOC107697104,LOC107550379 coding upstream 1821 21920295 ~ 21922335 (+)
LOC122325154 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding upstream 8503 21914643 ~ 21915653 (+)
LOC122325217 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding upstream 12745 21910401 ~ 21911411 (+)
LOC122325159 taar10b,taar10c,taar10d,taar10a,LOC107719439,LOC107550391,LOC107697107,LOC107697105,LOC107550394 coding upstream 23328 21899772 ~ 21900828 (+)
taar10a taar10a,taar10b,taar10d,taar10c,LOC107719440,LOC107697108,LOC107550390,LOC107719439,LOC107697105,LOC107697107 coding upstream 26195 21896951 ~ 21897961 (+)
LOC122325361 taar12c,LOC107697103,LOC107706946,LOC107550397,LOC107550396 coding downstream 1518 21926696 ~ 21927715 (+)
LOC122325420 LOC107550396,LOC107721014,LOC107706946 coding downstream 6149 21931327 ~ 21932340 (+)
LOC122325418 taar12f,taar12c,LOC107697103,LOC107706946,LOC107550396,LOC107550397 coding downstream 18792 21943970 ~ 21944989 (+)
LOC122325415 taar12h,LOC107550398,LOC107697080,LOC107756661,LOC107735327,LOC107683198 coding downstream 22222 21947400 ~ 21948428 (+)
LOC122325419 taar12c,taar12f,LOC107697103,LOC107706946,LOC107550396 coding downstream 25833 21951011 ~ 21952027 (+)
G140900 NA non-coding upstream 14823 21908974 ~ 21909333 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding upstream 71035 21850862 ~ 21853121 (+)
G140792 NA non-coding upstream 74021 21849762 ~ 21850135 (+)
G140788 NA non-coding upstream 77135 21846814 ~ 21847021 (+)
G140786 NA non-coding upstream 78703 21844833 ~ 21845453 (+)
G140905 NA non-coding downstream 8806 21933984 ~ 21978548 (+)
G140907 NA non-coding downstream 42520 21967698 ~ 21969950 (+)
G140922 NA non-coding downstream 135885 22061063 ~ 22061533 (+)
G140931 NA non-coding downstream 172733 22097911 ~ 22098292 (+)
LOC122324401 NA non-coding downstream 173227 22098405 ~ 22114867 (+)
G140785 NA other upstream 79455 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 722194 21168775 ~ 21201962 (+)
G140533 NA other upstream 821646 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1132453 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1249767 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 546583 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 581549 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 819234 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 917627 22842805 ~ 22860327 (+)
pln NA other downstream 1418537 23343715 ~ 23351655 (+)

Expression


Co-expression Network