pex7 (pex7,LOC107727680,LOC107676274)


Basic Information

Item Value
gene id pex7
gene name pex7,LOC107727680,LOC107676274
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20311424 ~ 20328698 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220350.1
ACACGGAAGTACACATCTGGTATACACATGTTTTGcgctaaatgtaaatatctagCAAACGCATTAATTTCCTGATGTTCCGTCGCATtggttattttgaatttatcgCTGTCGACAAATATTTGGCTTTTTACCACGAAGTAGGTTATTTACCGTGAATGCATTTTTGGTGGACTTTAGAGTCAGTAGTGTAATGACCTAGACGTTATTTCTACACGGTGTTATTAGAGAGTATGAAGTCGTTTAAATCTCCAGGTCGTCATGGATATGCGGTGGAGATTTCACCTTTTTTGTCTTCTACCATCGCCTGTGCGTCATCGCAGTATTATGGAATAGCagGATGTGGCACACTTTTTGTGCTGGAGCAGAGAGAGGCAGATGTTTCACTTGTGAGGAGTTTTGACTGGAATGATGGGCTCTTTGATGTGACATGGAGCGAGAACAATGAACATGTGCTGGTGACGGGAGGAGGTGATGGATCTGTGCAGATCTGGGACACTGCCAACCAACAAGGTCTTCTGCAGGTGCTGAAAGGGCACACACAAGAGGTGTATTCGGTAGACTGGAGTCAGACACGGGGGGAGAACCTGGTGGTATCGGGATCATGGGACCATACAGCCAAAGTGTGGGATCCAGAGCGATGTCAGTTAGTGAGCTCCCTGCAGGGTCATGAGGGTGTCATCTACAGCACCATCTGGTCTCCTCatatcccagcatgctttgcttCAGCCTCAGGGGATGGCACACTGCGAGTGTGGGATGTGAAGGCGGGATCCTGCAGACTGGCCGTCCCAGCGCACAAGTCCGAAATCCTCAGCTGTGATTGGTGCAAATACGACCAGAATGTTCTGGTCACTGGAGCTGTGGACTGCAGTCTCAGATTGTGGGACCTACGTAACGTTCGACAGCCTACAGCTCAAATGATGGGCCATTCCTATGCCATCCGCAGGGTGAAGTTCTGCCCATTCTCTAAGACAGTCCTAGCATCCTGCTCATATGATTTCACAGTCAGATTCTGGGATTACTCCAAGAACCAGCCGCTGCTGGAGACGCTGGAGCACCACTCAGAGTTTGTGTGTGGCCTGGATTTCAACCTGCATATCCCTAAACAGGTTGTGGACTGCTCTTGGGATGAGACTGTAAAAGTCTTCACCCCTTCATGCATGACCGCTCTATAGGAGGTTTGGTGCACCACAGCACATGGGAGCCACGACTCTGTTTCAATCACAGGTGTAGAGTTTGCCAAGATTTCACTGCGGTTTTCCTAATGACCCTATTAAAGGAGAACCCGTGGGATGCTTTAGGAGCATTGCGTCAGGAGCACCGTACAGATGAGGGGGAGTTCTCATGCTGTCACTGAGTGTAAAAACTGAGAGTGATGTTATTGTAGTTTTTCTAATGTGTAtaacaaaactaaaagtttACCTTAAAGGCGCAGTTCACCCGTAACAACTTCGgaacacaaactaaaatatttttgatgacatCCAAGAGCTTTATTGTCgttcatagacagcaatgtaactgaaataaatatgtgattTGGAGaagaattgttaaatatattcgttatttaaacaaaaacaaaaaacattcttgtagcttcataaaattacatttgaaccactgatgggctgtttttattaatgaccTTACTTTGTTCCTGGGTCTGGAACGTTTCAGTTATGTTGTGTtctcatttttggctgaactactcctttaagctGCGAGTGCCTTATTGTTGTCTAAACCTTGGTAGATTATGTAGTATGTTGTATATTGTTGTTGCTTATTGATTTGTTTggtgaattaaatattttatgtcattctcaa

Function

symbol description
pex7 Predicted to enable peroxisome matrix targeting signal-2 binding activity. Predicted to be involved in protein import into peroxisome matrix. Predicted to be active in cytosol and peroxisomal matrix. Human ortholog(s) of this gene implicated in peroxisomal biogenesis disorder and rhizomelic chondrodysplasia punctata type 1. Orthologous to human PEX7 (peroxisomal biogenesis factor 7).

NR:

description
peroxisomal biogenesis factor 7

GO: NA

KEGG:

id description
K13341 PEX7, PTS2R; peroxin-7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220350.1 True 1833 mRNA 0.44 10 20311424 20328698

Neighbor

gene id symbol gene type direction distance location
LOC122324455 slc35d3,LOC107727602,LOC107676236,LOC107675071,LOC107717122 coding downstream 139 20306639 ~ 20311285 (-)
pbk pbk,LOC107598104,LOC107717112,LOC107727585,LOC107676230,LOC107602197 coding downstream 6550 20301406 ~ 20304874 (-)
ccdc25 ccdc25,LOC107727664,LOC107602198,LOC107676265,LOC107675065,LOC107598073,LOC107716775 coding downstream 15265 20293294 ~ 20296159 (-)
clu LOC107602200,LOC107727630,LOC107676249,LOC107675063,LOC107716747,LOC107598069 coding downstream 47574 20258253 ~ 20263850 (-)
LOC122325054 cyp39a1,LOC107727679,LOC107676273,LOC107602202 coding downstream 69113 20230975 ~ 20242311 (-)
hey2 hey2,LOC107717129,LOC107727582,LOC107598074 coding upstream 1992 20330690 ~ 20334913 (-)
tpd52l1 rnf217,tpd52l1,LOC107727670,LOC107676269,LOC107602193,LOC107675045,LOC107716996,LOC107602194,LOC107676250,LOC107675093,LOC107727644 coding upstream 44487 20373185 ~ 20407062 (-)
clvs2 clvs2,LOC107675233,LOC107675107 coding upstream 267565 20596263 ~ 20616215 (-)
smpdl3a smpdl3a,LOC107727613 coding upstream 298275 20626973 ~ 20632507 (-)
fabp7b fabp7b,fabp7,LOC107675216,LOC107602177,LOC107717149,LOC107675046,LOC102218712 coding upstream 304019 20632717 ~ 20633782 (-)
G140328 NA non-coding downstream 24429 20286480 ~ 20286995 (-)
G140315 NA non-coding downstream 43158 20266668 ~ 20268266 (-)
G140304 NA non-coding downstream 143426 20148280 ~ 20167998 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 401777 19905631 ~ 19909647 (-)
G140248 NA non-coding downstream 509756 19800522 ~ 19801668 (-)
G140413 NA non-coding upstream 297957 20626655 ~ 20626863 (-)
G140449 NA non-coding upstream 407890 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 663823 20992521 ~ 20995513 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding upstream 667668 20996366 ~ 20996681 (-)
LOC122325251 NA non-coding upstream 717127 21045825 ~ 21049976 (-)
G140277 cad,LOC107602171 other downstream 248447 20061602 ~ 20062977 (-)
G140227 cad other downstream 251821 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 696222 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 1007456 19298234 ~ 19303968 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other downstream 1048472 19261466 ~ 19262952 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other upstream 81931 20410629 ~ 20542249 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 305598 20634296 ~ 20658380 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 639490 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 760706 21089404 ~ 21091008 (-)
G140616 NA other upstream 870012 21198710 ~ 21278741 (-)

Expression


Co-expression Network