grem1a (grem1a,LOC107721306,LOC107549097,LOC107693796,LOC107601908,LOC107756591,LOC107668262)


Basic Information

Item Value
gene id grem1a
gene name grem1a,LOC107721306,LOC107549097,LOC107693796,LOC107601908,LOC107756591,LOC107668262
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15276107 ~ 15278071 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220354.1
ACTGCCCCGTTCTCTTAAATGTCAGCACTCAGAACAGAGCTGCAGAACTTATTTAGACTCTGACTCTGGAGTTCTGGATCATCTGGTTCAACCTATTAATCGTAGTTTGTTATGGTACACAAAGACCTTTGTGAACGCAGCTGCAGTCCATGAGAAGAAGTTCGAACCATTATTAATCTGAGGATGACTAAAGACGCATTAGCTGTCACTGTCGTGGTCTTGTGGCTGCTCTGCAATCCGGCGAGGATCAGGGGAACCGGGGGATTTCAAGGCGCCATTCCTCACCCAAATAAATACAGCCCAAACCAGTCGGAACAGTCACCGCAGACGCCGCAGGCCGGTTCCAGGGGAACGGGACCGCCTTCGGTCGGGGACGAGGTGCTGGACTCCAGCCAGGAGGCTTTACACGTAACGGAGCGCCGTTACCTCAAACTCGACTGGTGTAAAACGCAGCCGCTGAAACTGATGATCTACGAGGACGGGTGCCAGCCGCGCACCATCATCAACCGCTTTTGTTACGGACAGTGCAACTCATTCTACATCCCTCGGCACGTTTATCAAGAGGACAGTGCGTTTCAGTCGTGCTCCGTGTGTAAGCCGAAGAGCTTCACTACCGTTACTTACACGCTCTACTGTCCAGGACAGACTCCCAGCACGAAGAAGAAGCGCGTGCGCCGCGTCAAACAGTGCCGCTGTACTTCTGTGGACTTGGATTAAACTCGCGGATTTCTTTCTTTGTCGGCTACTCCTAAAAGTCGCAAATTCATATACCTGAATAACGTGGGAGAATAACGATTCGTTTCCTCCGCCTCTGTATTGTGAAGACGTACAATTGACGCAAATGAAATGTGTTATAAGTTATAATACTATGAAATAgtgacatattaaaaatatgcttatattattatattattctccACTGTGTGGAGCAGGATTTGCGCATCGATGCAAATAGCTTATTTTGTGGCTTGATTTTTATTGTAGGATTGCATATTAGGCTATGGATGTAAATAATTTCCATTCCATCATTTGTTTCTGGTCTTTATGCcatattgaaatgtaaaaaagaatgTGGTGCCTTTTTAATCACTTGATGAAGAAAATCTAGGCGAACAAAcattacagaaaacaaataaaatgcatgtttttatatatttttttttttacaatgttggGTTTATTATAAAAGGAACATTATTACTGTGATTAAATGGCAATACGAAGTGATGAAGCCACATAACTGtcatcaataaaaatatgtgcTGTTCATCCAAATAAAACTAATAGGGtagtttaatattatattatttcacatttacattgtcattgttttttatcATTGTCATTTAATATGAACATAAAAAGTTACTCAACTTTGCTACtctttatacaaaataaagttacTGCCTTTTTCAAAGTCAAATGTTGAGACTGCTTTTTCAACCCTTAATTGTTTAGACTGGTGAAAATCCCAGAACAGATTGagctaaatataaacatttcttaaatgtttCTCATTTGAGCAGCATTTTTAtctgaaacatgtttttttggtGAGCCATTGGTTGTTGGATTATACATTGGAATGGGATCATTATACTGACAGACAGGTTATCATCTTCTATCTCTGCAGTCTTGAGTAAAAACTATCAGACAAACAGGTGCACCTTAATCTAACCCTGCCAAAAATACAAGTGCGTGGGtc

Function

symbol description
grem1a Predicted to enable BMP binding activity and receptor ligand activity. Predicted to be involved in animal organ morphogenesis and sequestering of BMP from receptor via BMP binding activity. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including cranial vault; notochord; pectoral fin bud; pronephric duct; and segmental plate. Orthologous to human GREM1 (gremlin 1, DAN family BMP antagonist).

NR:

description
PREDICTED: gremlin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220354.1 True 1705 mRNA 0.40 2 15276107 15278071

Neighbor

gene id symbol gene type direction distance location
ryr3 ryr3,LOC107721310,LOC107756592,LOC107601913,LOC107549090 coding downstream 23482 15185712 ~ 15252625 (-)
chrm5b LOC107721291,LOC107549091,LOC107668256,LOC107601926,LOC107668210,LOC107756593,LOC107671776 coding downstream 100693 15166406 ~ 15175414 (-)
thbs1b thbs1b,LOC107671781,LOC107721311,LOC107549089,LOC107601983,LOC107668245,LOC107756566,LOC103031445 coding downstream 186534 15078974 ~ 15089573 (-)
susd6 susd6,LOC107721312,LOC107756599,LOC107549087 coding downstream 239220 15015837 ~ 15036887 (-)
rab15 rab15,LOC107671782,LOC107668202,LOC106571087 coding downstream 291251 14976262 ~ 14984856 (-)
LOC122325338 scg5,LOC107549096,LOC107721307,LOC107756590,LOC107601900,LOC107668261 coding upstream 147 15278218 ~ 15280428 (-)
actc1a actc1a,act2,zgc:86709,LOC105024319,LOC100534413,LOC102689871 coding upstream 2931 15281002 ~ 15284293 (-)
LOC122324271 rrm2,LOC107668265,LOC107549099,LOC107756588 coding upstream 10700 15288771 ~ 15292255 (-)
LOC122325630 NA coding upstream 12204 15290275 ~ 15290410 (-)
klf11a klf11,klf11a,LOC107549098,LOC107693793,LOC107668260,LOC107756587,LOC107601876 coding upstream 16447 15294518 ~ 15297908 (-)
LOC122324712 NA non-coding downstream 432371 14839057 ~ 14843736 (-)
G138627 NA non-coding downstream 482398 14793495 ~ 14793709 (-)
G138579 NA non-coding downstream 697206 14578701 ~ 14578901 (-)
G138562 NA non-coding downstream 751084 14524732 ~ 14525023 (-)
G138537 NA non-coding downstream 847855 14426959 ~ 14428252 (-)
G138812 ywhaqa,ywhaqb,LOC107721301,LOC107549101,LOC107756586,LOC107668239,LOC107733143 non-coding upstream 45501 15323572 ~ 15324280 (-)
G138811 NA non-coding upstream 53730 15331801 ~ 15347281 (-)
G138828 NA non-coding upstream 92537 15370608 ~ 15380969 (-)
G138853 NA non-coding upstream 238772 15516843 ~ 15517070 (-)
G138862 NA non-coding upstream 406105 15684176 ~ 15711053 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other downstream 260838 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other downstream 272905 14997125 ~ 15003202 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other downstream 830182 14441533 ~ 14445925 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other downstream 1077579 14193733 ~ 14198528 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 1508283 13763335 ~ 13767824 (-)
LOC122325611 NA other upstream 564327 15842398 ~ 15842618 (-)
LOC122325617 NA other upstream 564827 15842898 ~ 15843118 (-)
LOC122325622 NA other upstream 565338 15843409 ~ 15843629 (-)
LOC122325613 NA other upstream 566283 15844354 ~ 15844574 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other upstream 712078 15990149 ~ 15993645 (-)

Expression


Co-expression Network