CI01000001_10862471_10864514



Basic Information


Item Value
gene id CI01000001_10862471_10864514
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10862225 ~ 10865770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000001_10862471_10864514.mRNA
ACACTCAACAAGGTCAACATGCCAAAGTTTTCATTCAGATAACATCAGAGATGATGATGACAAAAATAATCAAGTCGACAACAATGATGAAAATTATTATAATGACGCAGACGAATGTGCTGGAGTTTTATTACGTTGATGTGAAAGTGGATTAGTGCTACCTGGGCTGTTGCTAACATTGGCTTGAACTGATCAAATCTGTTCTCCAGAAGGAACTTCAAAGTACAGCTGCCCTTTGCATGAGTGTGGGCAGCAACTAATGGATGTTCCCACTAATCAACCCTGCATGTCGCCAGGCCAGTTAGATGCCCCCTCAAGATGTCCATAGAGTCCGTGAGACACCGTTCTCATCATCCACCACTCCATCTGTGTAATTGCTTCCTTGAGAGATTACATTCCCGCCAGTGACAGCACCAATTAGGCAGTCAGGAGGAAAATACGACAATAAGGCCCTACTTAGCAGAGAAAAGTAGCATTCGGATAGATATCAGCATAATCTTAATGAGCCAACAAACATGACATTTAGATGTGCTCTCACGCAAATGCTTGAGTTTGGCCCGCACATGCGGGAGAGGTTTCCTTCAAGGATGGTACTCGGTAACCTTGAATGGGGGAAAAAATCTGGCAAAGTTACAGATATGAGTTGCAAGATTTCAAATCTGAGTTATTGATGATAGGGGTTTGACAAAAGAGTATATGGTTTGTCCTTTTAAGGAATGTCTCACGCCTCTGATGTCAGGATCTCAATTGCATGGTCATTGCTGATGCAGAATACAAACCCTTAAACCACACCTACACTGCGACATCTGATTGGACTTACGCACATGTTGCTATCATTTAACAATCAGACAGGAGAGAATCCCTGTCTCTGTGTCTCTTGTCTGATAGTCCATCACAAAAGGATTTAAGTCCTTGATCAGAAACTGTAACTCAGCTGTTTCTACAGACCATTATCCTCAGCTCAGGTAAGTACCAATACCTGTAAAATGTTCTTTAAAATGTTACCTATTTCAAATCACAATTTTACATTATTGTATTAGTTTTTATTATTATTTGTAATAATGTAAAAAAAAAAAAAAAATCTATTTAACAAAGGTTTTCCCTCCTGATGGTTTAGTGTTAAGTTATACTGATTAAAGCAATCAAGAACGGCTGCAACTGGAGAGGGGAAACTTTATATTTTAATTTTAGCAAAGAAAATGACGCTGTGAAATGTAGCATCTTATCATATTTTCCCCTCAGACTGATCTGTAAAGATGTACCGTGGACTAGTTTTACTGTTCTTGGTTTTGGTGCTGGAAACCCGATGGAGTGAATCGAGCTGTCAGCAGTCTCAAGAGTCTGAAAGATCAGATTCAAATGAGAGTCCAAGTTTTCGGCTGTCGGCTCATAACTTGCTGAAGAGGTATAATGACATAGATTATGACAGTTTCGTCGGATTGATGGGGCGCAGAAACGCCGACACAGATGATATACCACCCCAACGTAAAAAAACTGGGCGTCCATGGAGGAAAGATTATCCAGAAACAAGCAGAGGCATTTTCTTCAACAAATGCAAACTGAGATTTCGTCGTGGGTTATAGGCAAATGAATTATTTCATATCCGGTGAATCGTCTGTACCACCCTGTCATGACAGCTTCTTTTCAAGACATTTCTTTGGAGCAAAATCATTTATTTTACAAAAGTAATAGAGCAAAAGAAAATATTTATATAAAATGAATCAAATAAA

Function


NR:

description
TAC3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000001_10862471_10864514.mRNA False 1730 mRNA 0.39 5 10862324 10865770

Neighbor


gene id symbol gene type direction distance location
CI01000001_10822800_10843434 NA coding downstream 18890 10822680 ~ 10843434 (-)
CI01000001_10798413_10798703 NA coding downstream 63391 10798329 ~ 10798933 (-)
CI01000001_10783090_10786991 NA coding downstream 75333 10782850 ~ 10786991 (-)
CI01000001_10676846_10683262 ANKRD33AA coding downstream 178280 10676522 ~ 10684044 (-)
CI01000001_10658398_10672912 ACVRL1 coding downstream 188847 10658392 ~ 10673477 (-)
CI01000001_10896443_10925951 ZNF385A coding upstream 30438 10896208 ~ 10925951 (-)
CI01000001_10983526_10986681 NA coding upstream 116413 10982183 ~ 10986911 (-)
CI01000001_11004027_11004884 NEUROD4 coding upstream 137844 11003614 ~ 11005633 (-)
CI01000001_11034064_11048961 C1QL4.L, C1QL4, C1QL4A, C1QL4B coding upstream 168093 11033863 ~ 11048961 (-)
CI01000001_11089521_11092848 NA coding upstream 223650 11089420 ~ 11093631 (-)
G20237 NA non-coding downstream 28156 10822047 ~ 10834168 (-)
G20180 NA non-coding downstream 81306 10779120 ~ 10781018 (-)
G20183 NA non-coding downstream 85856 10773208 ~ 10776468 (-)
CI01000001_10638148_10656332 ACV1B, ACVR1BA, ACVR1BB, ACVR1B non-coding downstream 205055 10638100 ~ 10657269 (-)
G20268 NA non-coding upstream 8186 10873956 ~ 10874264 (-)
G20286 NA non-coding upstream 9345 10875115 ~ 11303893 (-)
G20247 NA non-coding upstream 54704 10920474 ~ 10928405 (-)
G20292 NA non-coding upstream 123524 10989294 ~ 10992998 (-)
G20230 NA non-coding upstream 158780 11022127 ~ 11028777 (-)
G20136 NA other downstream 322474 10539027 ~ 10539850 (-)
CI01000001_09804494_09811219 NA other downstream 1041428 9804429 ~ 9811219 (-)
G18223 NA other downstream 2933807 7926104 ~ 7928517 (-)
G18023 NA other downstream 3104804 7756501 ~ 7757520 (-)
G17911 NA other downstream 3609070 7251311 ~ 7267952 (-)
G20319 NA other upstream 245067 11110837 ~ 11114747 (-)
G20315 NA other upstream 254382 11116755 ~ 11120830 (-)
CI01000001_12878462_12899012 NA other upstream 2007628 12878365 ~ 12899469 (-)
CI01000001_12921289_12924608 NA other upstream 2054829 12920599 ~ 12925496 (-)

Expression



Co-expression Network