CI01000001_10968536_10981345


Basic Information

Item Value
gene id CI01000001_10968536_10981345
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10968344 ~ 10981787 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10968536_10981345.mRNA
GTATATAAATCTATTGTACAGCTCCAGATAAATACAGAGCATAAGTGACATGAGGGTGAGTAAACAATTACCAAATTTTCATTTTTGGGAACTATTCCTTTAAATGATTTGGCTGCAAGAGTGTGTGTGTGCTCCGACAGGTGTGCAGGTGTGCATGGAGGAAAGGGGGGACGTTCTGACTGGTTGGCCACAATGGAAACTCCACACTGGGCAGGCGGCAGTGAATGCACATCGCGGCGCTGCTGCTCGGGTTACTCACCTCTCCTCCAGCAGCCAACTCCGCTCTTTGTCTCAGTCCTGCCGATGAAAACACTGGGGACCAGGCGACATGCCACGGCTCCAGAGAGTCAAAGTGTGTCTGTATGTGTGCATTTGAGGCACTCTATGGTGAATGAGCAGTATTCTGAGGGGAGGGATCTGCAGGTCTTCTGCCGTCTTCGCTCAGAAGGCACACAATTAGACCAGCACCTGAGCAAACAGCTCATAATGAGGATGGACTCATGTGTGTGCCCTGATACACAAATGGGTAAACACACTGATACAGGGAATCATCTTGAGGATTTCAACATACCTGCTAAGTCATATTTCATTCTCCCTCTTAAAAGTACCAATTGCACAGAGAATTATGGTTTATTTAGAGAGCTATTTTTACATAGAGCCTTGGGGAATCACATCCCCAAACATACACACTTCTGTAGCGCCTCCAGACTGCAAACCAAGCCTCTCACGCAAGCAGCAAACAGGGCAAAGCAGGGACACAAACCTGGGACACGAACAAACCTGGAACTAGCATGCAAATTTAAACACCGTGTGCAGGACCAGATCAAAGATGCAGAGACATCAAGAGTCAGAGAGAGAAACAGAGCTTCCATGTTGAGATACTGCCCAGCTGCAGGGAAAGGTTCCATGTGCGAGGAGGACCAGGCCAAAAACATTTTAGGGACTCTGTGAAGGCTTCCCTGTCTGGCCAGAGGCCCATGGGTATATTGGAATATTGAGGTTCTATTTTTAATGTGTTTAACGAGAGACCAGAGCACAAGAGATTAAATCTGGACTCTGAGTTGGCCAGTTCAGCAGACACAGATACAGTATATCTAGGGATAGGGTGAAGCCCAGTTGTAAAATCTGTGTACTAACAGATCTTTCATCATAATCATCAATTCTCAACATGCTCCTCTGGTACTAAGAACAGGCCAAACGAACATTCTAGAGGAGAAAGGGTCATATATAAATTGTTCATGTTGTATATAAAAGGTTGTATATAAAGTGTATAGCAAACTAGAATTAACCCATTATCAGAATATTACATTTTAGTGGTTTAAAATCAGATGATTGACTTTAACATGGAATAACATTCGTAAGGAGCTGTCACATTTGTGAAATTTCAAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10968536_10981345.mRNA True 1393 mRNA 0.44 4 10968344 10981787

Neighbor

gene id symbol gene type direction distance location
CI01000001_10856786_10861403 C1GALT1A coding upstream 106206 10855960 ~ 10862138 (+)
CI01000001_10807407_10818870 SLC26A10 coding upstream 148291 10807320 ~ 10820053 (+)
CI01000001_10749174_10779222 ARHGEF25A coding upstream 188890 10749174 ~ 10779454 (+)
CI01000001_10715529_10716091 NA coding upstream 251434 10715114 ~ 10716910 (+)
CI01000001_10694664_10713151 NA coding upstream 253660 10694467 ~ 10714684 (+)
CI01000001_10989337_10992917 BIRC5B coding downstream 7550 10989337 ~ 10992978 (+)
CI01000001_11019871_11028065 MYL6, MYL6B coding downstream 37692 11019479 ~ 11028524 (+)
CI01000001_11099313_11137500 HUWE1 coding downstream 117526 11099313 ~ 11138278 (+)
CI01000001_11138617_11139541 NA coding downstream 156498 11138285 ~ 11139673 (+)
CI01000001_11182552_11204143 NADL1.2 coding downstream 200765 11182552 ~ 11204499 (+)
G19034 NA non-coding upstream 71439 10892437 ~ 10896905 (+)
G19088 NA non-coding upstream 93473 10874670 ~ 10874871 (+)
G19087 NA non-coding upstream 94111 10873982 ~ 10874233 (+)
G19080 NA non-coding upstream 152642 10814390 ~ 10815702 (+)
G18998 NA non-coding upstream 311073 10655387 ~ 10657271 (+)
G19121 NA non-coding downstream 89117 11070904 ~ 11126159 (+)
G19226 NA non-coding downstream 187506 11169293 ~ 11183770 (+)
G19096 NA non-coding downstream 273282 11255069 ~ 11304024 (+)
G19108 NA non-coding downstream 399787 11381574 ~ 11381987 (+)
G19258 NA non-coding downstream 405856 11387643 ~ 11387959 (+)
G19039 NA other upstream 114361 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 428498 10538388 ~ 10539846 (+)
G18937 NA other upstream 491955 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 571639 10394851 ~ 10396705 (+)
G18872 NA other upstream 686975 10271146 ~ 10281369 (+)
G19314 NA other downstream 519407 11501194 ~ 11558673 (+)
G19395 NA other downstream 699535 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2531617 13514115 ~ 13517063 (+)

Expression


Co-expression Network