jdp2b (LOC107685359,LOC107742717,LOC107593286,LOC107719362,LOC107697198,LOC107550414)


Basic Information

Item Value
gene id jdp2b
gene name LOC107685359,LOC107742717,LOC107593286,LOC107719362,LOC107697198,LOC107550414
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21750876 ~ 21755193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220461.1
GTTGCTAGGGGGCGTGGCCTAGCGCTCCTGCTGGCGTCACGCGCGGAGAGTTCCGCATTCCACGGCGCCCAGCGATACATAAACGCGCTGATGCAACGGGAACAGACGCGCAAACGAGCTAAACGGACGAGCGACCGCCGACTCTCAGCAGCGAACAACAGAAATGATGCCCGGTCAGATCCCTGATCCGCTGATGACGGCCGGTTCTCTGCCCAGCGTCGGTCCTCTGGCTGGGATTCCCGCCACCACCCTGACAGACCAGCTCAAACTAGCAGAGCTCTACAGCCTCGGCGCGGTTCTGTCTCCTCTCATCCTGAACAGACACGCCAAGAGACCGTTCGACGTCATCAAGGGTGAGGCAGATGATGACGAGGAACGCAAGAAGAGGAGGCGAGAGAAGAATAAAGTCGCAGCCGCTCGCTGTCGAaacagaaagaaggaaagaacaGACTTTCTCCAGAAGGAGTCTGAGCGCTTGGAGACGCTGAATTCGGAGCTGAAGTCTCAGATCGAGGATCTGAAATCTGAGCGGCAGCAGCTGATCGTGATGCTCAACCTGCACCGGCCCACCTGCATCGTCCGCACAGACAGCGTGAAGAGCCCCGAGAGCGACGAGCACGTGCTGGACCGGCGTGAGGAGCAGTCcgactgaacacacacacacacacacacagctgaggCGCTGTCAGGACACTAGCACAAGAAGAAGAGATGATGCAGGACATTCACTCTCAGAGGAAACGGTCTGggatttatacatataaaaaaaaacacaacaacaacaacatcctGTCAGTGTCAATATCAGCATAAAGCAAAAAGGAAGGACATTTGTGTGGACGACAAACAAACCTCCACGAGATCACCCAAAAAGCTCAAAGACGTTAGAAAGGCGCTGGTGGAGCTGCAGGCGTCGCGTCTCTCAGTTGATCTGAGCGCTTCCTCCGGCGGCCTGCAGGCGGCGCTGTCTGATAAACTCTTCACTGACGCGGGCGTCGCTAAGAACCGATTGTTTACAGTTGTTTGCATTGACGCGGTCAATTGTATATTGTACtgtttattgtatttacatttttattgtgccATTACATGATACAGAGTATGTTTTATGTTCAGGGTGTCTGTTGAACGGCCACTTTTATTACCAAATAATGCTTCTTTGTTACATGAAGCCCCATTAAAATAAAGCCTATTTTTCAAATACAA
>XM_043220462.1
CTAGGGGGCGTGGCCTAGCGCTCCTGCTGGCGTCACGCGCGGAGAGTTCCGCATTCCACGGCGCCCAGCGATACATAAACGCGCTGATGCAACGGGAACAGACGCGCAAACGAGCTAAACGGACGAGCGACCGCCGACTCTCAGCAGCGAACAAAAATGATGCCCGGTCAGATCCCTGATCCGCTGATGACGGCCGGTTCTCTGCCCAGCGTCGGTCCTCTGGCTGGGATTCCCGCCACCACCCTGACAGACCAGCTCAAACTAGCAGAGCTCTACAGCCTCGGCGCGGTTCTGTCTCCTCTCATCCTGAACAGACACGCCAAGAGACCGTTCGACGTCATCAAGGGTGAGGCAGATGATGACGAGGAACGCAAGAAGAGGAGGCGAGAGAAGAATAAAGTCGCAGCCGCTCGCTGTCGAaacagaaagaaggaaagaacaGACTTTCTCCAGAAGGAGTCTGAGCGCTTGGAGACGCTGAATTCGGAGCTGAAGTCTCAGATCGAGGATCTGAAATCTGAGCGGCAGCAGCTGATCGTGATGCTCAACCTGCACCGGCCCACCTGCATCGTCCGCACAGACAGCGTGAAGAGCCCCGAGAGCGACGAGCACGTGCTGGACCGGCGTGAGGAGCAGTCcgactgaacacacacacacacacacacagctgaggCGCTGTCAGGACACTAGCACAAGAAGAAGAGATGATGCAGGACATTCACTCTCAGAGGAAACGGTCTGggatttatacatataaaaaaaaacacaacaacaacaacatcctGTCAGTGTCAATATCAGCATAAAGCAAAAAGGAAGGACATTTGTGTGGACGACAAACAAACCTCCACGAGATCACCCAAAAAGCTCAAAGACGTTAGAAAGGCGCTGGTGGAGCTGCAGGCGTCGCGTCTCTCAGTTGATCTGAGCGCTTCCTCCGGCGGCCTGCAGGCGGCGCTGTCTGATAAACTCTTCACTGACGCGGGCGTCGCTAAGAACCGATTGTTTACAGTTGTTTGCATTGACGCGGTCAATTGTATATTGTACtgtttattgtatttacatttttattgtgccATTACATGATACAGAGTATGTTTTATGTTCAGGGTGTCTGTTGAACGGCCACTTTTATTACCAAATAATGCTTCTTTGTTACATGAAGCCCCATTAAAATAAAGCCTATTTTTCAAATACAA

Function

NR:

description
PREDICTED: jun dimerization protein 2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220461.1 True 1206 mRNA 0.52 4 21750876 21755193
XM_043220462.1 False 1199 mRNA 0.52 4 21750876 21755189

Neighbor

gene id symbol gene type direction distance location
LOC122324966 LOC107685373,LOC107593287,LOC107708319 coding downstream 20648 21713484 ~ 21730228 (-)
wdr26b wdr26b,LOC107697199,LOC107708322,LOC107685355 coding downstream 37814 21699406 ~ 21713062 (-)
fez2b si:ch211-57i17.1,LOC107708323,LOC107685354,LOC107719364,LOC107550411 coding downstream 53182 21690418 ~ 21697694 (-)
lpin1b si:ch73-21k16.1,LOC107708326,LOC107593263,LOC107685350 coding downstream 95312 21640329 ~ 21655564 (-)
gnpat2 si:ch73-21k16.5,LOC107593264,LOC107697202,LOC107719367,LOC107550407,LOC107685372 coding downstream 111330 21630270 ~ 21639546 (-)
si:ch211-153j24.3 LOC107719361,LOC107550416,LOC107697117,LOC107593301 coding upstream 4929 21760122 ~ 21763823 (-)
zc3h14 LOC107742714,LOC107719357,LOC107697193,LOC107685361 coding upstream 24134 21779327 ~ 21787486 (-)
rad51 rad51,LOC107742737 coding upstream 39035 21794228 ~ 21799132 (-)
adgrg11 LOC107593299 coding upstream 44139 21799332 ~ 21815029 (-)
flvcr2b flvcr2b,LOC107742711,LOC107685368,LOC107719354,LOC107697188 coding upstream 69362 21824555 ~ 21835801 (-)
G140807 NA non-coding downstream 51601 21698420 ~ 21699275 (-)
G140824 NA non-coding downstream 78952 21576838 ~ 21671924 (-)
G140826 NA non-coding downstream 182516 21567633 ~ 21568360 (-)
G140817 NA non-coding downstream 198645 21549084 ~ 21552231 (-)
G140808 NA non-coding downstream 267576 21482618 ~ 21483300 (-)
G140801 NA non-coding upstream 15837 21771030 ~ 21774369 (-)
G140882 NA non-coding upstream 85322 21840515 ~ 21840765 (-)
G140884 NA non-coding upstream 86569 21841762 ~ 21842034 (-)
G140885 NA non-coding upstream 86933 21842126 ~ 21842345 (-)
G140888 NA non-coding upstream 89601 21844794 ~ 21845021 (-)
batf batf,LOC107697118 other downstream 9799 21732544 ~ 21741077 (-)
LOC122324936 NA other downstream 238393 21507244 ~ 21512483 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other downstream 245221 21483592 ~ 21505655 (-)
G140616 NA other downstream 472135 21198710 ~ 21278741 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other downstream 659868 21089404 ~ 21091008 (-)
G140883 NA other upstream 85920 21841113 ~ 21841468 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other upstream 87239 21842432 ~ 21844633 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other upstream 90021 21845214 ~ 21846917 (-)
G140972 NA other upstream 357409 22112602 ~ 22113044 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other upstream 1629378 23384571 ~ 23401391 (-)

Expression


Co-expression Network