asb2a.2 (asb2a.2,LOC107659190,LOC107721380,LOC107583801,LOC107602948,LOC107711632,LOC107665367)


Basic Information

Item Value
gene id asb2a.2
gene name asb2a.2,LOC107659190,LOC107721380,LOC107583801,LOC107602948,LOC107711632,LOC107665367
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 14163287 ~ 14168599 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220486.1
ATATTTATAAGGTAATTCGGTTTGTTTACACCGTGACGTGAAATCAAGATCTCTCAGAGACTCTTCATAAAGCACGCAGCAGCAACTGCTGTACAGATAAAGGAGATGATCCACAAGCACCACATTCGACGTATAATTATTGATATCTTGTAGCAAGGTGCAAAATGGCAGCAGCCAGTGTGACAATGGCTGCTTCAGTGACAACAAACGACAACCTGGAGGACTTCAGTGCTTATGCACACTTGTCTGAAGAACAGCTGTTGCAGATAGCTATTGAACGAAGCCTAGCTGATGCAAATTTAACTCCATGGCAGAATCGACAAGTGCGTGCCCACATGCAGCCGTCTGCCCCCAAAGCTACACGACAACCACCATGCAACCCTAGCTCTGCAAACCCTCCCAGTGAGAAGAGGTGTGCCAAAATTGACAGAAATGTTCACGATTATATGTTCAGTAAAGACCAAGAAAAGGTGATTGCCTGGACAAGGCACAATGGACACCTGCGAGTCACAGTAGAGACTGTGAATGATTTAGACCCTTTTCTCTCTGCCATTTGGAGAGGGGATGCAAAAGCGCTACAAGACCTCATTCAtttcaaatctaaaaatctTGACGAACCCAATAAAGATGGCTGGTTACCACTTCACGAGTCTGCATACCACGGCCATTTGGAGTGCCTTATGATTTTGCTCAAAGCCAAACCAGATACGATTAACAAACGAACAAACAGAAGTCAGACACCGCTCATGCTGGCTGTGAGTCGCAAACACGTTTCTTGCGTCAGGCACCTCTTGGAGGAAGGAGCTGATCCTAACCTTGCAAACAACCAGTGGGAGACACCACTGTACAAAGCATGTGAGAAACCTAATGAAGAGATAGTGGAGCTTCTTTTGAGATTTGGAGCTTCACCATCCAAAGCCTGCGTTCAAGGCGGGACTCCGCTACATGAAGCAGTGAGGAACAAAAAATTAGAGATGTGTAAGATATTGATTCATGCTGGGGCAAAGCTGTGGGCCAGAAACGTTTATGGCATTGACGCACTGTTTACGGCTGCTCAGTGCAATGCTGTTAATGCGCTTAACTACCTAATATATAAAGGAGGTAATGTAAATACCAATGCAAATGATGATGCAACCGCATTGTTTGAGGCCTCTAAGAACGGTCATGCTGAAGTTGTTGAGATACTCTTGTCAAAACGAGCTGATGCTAACAAAGCCAACAAAACTGGATTACTTCCTATTCATGTTGCATCAAAAAATGGTCATGACAGcaTTGTTGCCATGCTCATCCCCAAAACTAACATGGTCAAAGTGACACGTTCTGGCATCAGTCCTCTTCATTTGGCCGCAGAACGTAACAGAGATGACGTTCTAGAAACATTAATAGACGCTGGATATGACGTCAATGCGAAGCTGTCAGATGATTGGTCAAAAATGTATGAAGATCGGCGCAGCACGGCTCTGTACTCAGCTGTGGTAAACAGAAACACGGAGGCAGCCGCTATGCTGTTAGAAGCAGGTGCTGATCCAAACCTGGATATCTTCAACCCCCTGCTGGTGGCTGTGAGGAAAGCAAGCATGGAAATGGTGACCTTACTGGTGAATCACGGGGCTAATCTCAACGCCTTGCTGCCAACTCATCCTACCAGCTTCCCAGCAGTACTGGTTTTCTGTATGAGGTACAAGGCGATGATGAAGTACCTGCTGGACAACGGCTGCAACGCACTGTCGTGTTTTACCTGTCAGTATGGCAGTAATCCTCATCCCCCCATTAAACCGAGAAGAAATGGACGAGAaactatgtatttattaaatgatgaaCCATCAGAGTACTGTGTAGAGttttgtgaGATAATCTCTACTCCCTCAGTCAGCGGCTGGGTGGGACCCATCATAGACATATTACTTGATTATGTGGGTCATGTCAAACTCTGCTCTCGATTAACTGAATTTCTAGACGGCAACAAAGATTGGGCTCATATTAAAGAGAAATCAGTTCTTCCTTGCACGCTGATGCATCTGTGCAGACTCAAGATTCGTCAACAGCTGGGCATCCAGAGACTATCGCAAACTATTGCTCTTCCTCTACCAGGAAGATTGCTCAAGTTTTTGAGTTATGAACGAGAATCGTTTGAAGATATCCTGTGATGAACAGCATGTCGCTCTTAGTTGTTTGCAGAACATgcaactttaaattattttgttacagATAATGTGTcattaattttcaatttaaaagctTGAGATCTAAAAATCATTTAGCGTTTATTTTCCGTTCTAAAGGTAATTATTCtcaatacatgtaaataaaataatattcaaatgtatGCTGCCTTGCAAAAGTTTTGCAACATCTTGATTTTCTcatgttttgttatgttgcagACCTATGATAAACtgtttaaatcactttttattcaACTCTGTACACCAAAATAGTGTAGCAAAAATAGAAGTTTAACAACTttgtaaatttatataaaaaaaacaacaaccctgaaataagtacattgcataagtattcatacctcATTACTCATTACTTGGCTGAATCATTCTGAATGGCAAAATGATATGCCAAGTCCCTCCtcaattaattgtttaacacgTTAAGACTTTTACCAACTAGCAGTTGCCAAGGGGTAACACAAATATGACCAATCTACCTTTTCATAATCGAATTTTAAAGATTATGACCCATAttgatgaaaatatttaaatgactaaGTTTTTAAAACTAATCTAAAGAGTTTATGCAACCGGCCGCTTCTGGTCTTTCCAAAGGTATTTTGTTATGGATAATGGAAAAACATGCTCCTGTGAGCCTTCAGTGGAgcagaatttcttttttctaaacTCTTCCTCAGATGTATGACTTGATGCAAACCTGTTTCTGAGCTCTACGGGCAGTTCTTTTGATCTCATGGCTTGGTTTTTCAGCATTGCATCAGTCGAGGTGTGTGCCTGTCCAAATCATACACATTCAAATGAATTGGCCATAGTTTTGAGATACGTAATTTTGTTTATACAAGTGCCTagctaaatgtatttacacactTAGCGACAGTATTATGTGACTATGCATTAAACAcctaatgtgattttttttatgctgctaTAATATTATGAAGACAAGCTGTActttaaattagtaaattagtTTACAGCGATTTAACTGAATAGAATTAAAGCATTCTTAGCATTTTGTAATGAAGATGTACTGTACACACTGATAAGTGGTTACTGTGATATAACAGTAATGTATGAAGAGTTCAAGCTTAGATTTTTGTGTAACTCCTGTAGTATTACTATAAATTTGTGGTGTTTTCTATTTGCTTGACTCTGTGAACTTGCAGTGAAATAAAACTCTTGCATCTCCACA

Function

symbol description
asb2a.2 Orthologous to human ASB2 (ankyrin repeat and SOCS box containing 2).

NR:

description
ankyrin repeat and SOCS box protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220486.1 True 3381 mRNA 0.40 10 14163287 14168599

Neighbor

gene id symbol gene type direction distance location
asb2a.1 LOC107721379,LOC107659189,LOC107583790,LOC107711656,LOC107602264 coding downstream 1725 14153743 ~ 14161562 (-)
btbd7 btbd7,LOC107659192,LOC107721332,LOC107583814,LOC107711654,LOC107602295,LOC107665372 coding downstream 56522 14062042 ~ 14106765 (-)
si:dkeyp-55f12.3 NA coding downstream 107972 14054422 ~ 14055315 (-)
itpk1a itpk1a,LOC107586239,LOC107659161,LOC107602955,LOC107711651,LOC107665329 coding downstream 112899 14034739 ~ 14050388 (-)
ftr97 LOC107659198,LOC107711646,LOC107602372,LOC107583926,LOC107665304,LOC107721339 coding downstream 181941 13968392 ~ 13981346 (-)
serpina10a serpina10a,LOC107659188,LOC107711658,LOC107569891,LOC107721331,LOC107665369,LOC107602246 coding upstream 20194 14188793 ~ 14193137 (-)
LOC122324437 LOC103911517 coding upstream 32858 14201457 ~ 14205606 (-)
LOC122324587 LOC107737325,LOC107555768,LOC107556167 coding upstream 249843 14418442 ~ 14439790 (-)
LOC122324588 ccdc170 coding upstream 260829 14429428 ~ 14433800 (-)
zbtb25 zbtb25,LOC107711665,LOC107602170,LOC107668255,LOC107721290,LOC107659158 coding upstream 359924 14528523 ~ 14532800 (-)
G138415 LOC107659195,LOC107583832,LOC107659196 non-coding downstream 129831 14031165 ~ 14033456 (-)
G138399 LOC107711644,LOC107659205,LOC107721344,LOC107602456,LOC107665390,LOC107602691,LOC107555778 non-coding downstream 163938 13941228 ~ 13999349 (-)
G138463 NA non-coding upstream 13610 14182209 ~ 14183160 (-)
G138502 NA non-coding upstream 101124 14269723 ~ 14467414 (-)
G138537 NA non-coding upstream 258360 14426959 ~ 14428252 (-)
G138562 NA non-coding upstream 356133 14524732 ~ 14525023 (-)
G138579 NA non-coding upstream 410102 14578701 ~ 14578901 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 395463 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 471280 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 614696 13547276 ~ 13548591 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other downstream 715899 13423958 ~ 13447388 (-)
LOC122324483 NA other downstream 899003 13260919 ~ 13264284 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other upstream 25134 14193733 ~ 14198528 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other upstream 272934 14441533 ~ 14445925 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 824500 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 828526 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1673799 15842398 ~ 15842618 (-)

Expression


Co-expression Network