LOC122325446 (taar13e,LOC107719422,LOC107550389,LOC107697109,LOC107593251,LOC107685383,LOC107697111)


Basic Information

Item Value
gene id LOC122325446
gene name taar13e,LOC107719422,LOC107550389,LOC107697109,LOC107593251,LOC107685383,LOC107697111
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21886498 ~ 21887523 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220496.1
ATGGATATTTTAACACAAGATTATGATCTTGCTCagttttgttttccttcagtGAACAACTCTTGTCTTAAAGACACACATCATGTTTCTGCTCAGACTGTGGTGTATCTCCTGTTGGTGTCTGCAATGATTGTGACCATTCTAGGAAATTCAGTGGTCATCATCTCCATTGCACACTTCAAACAGCTCCAGACTCCCACGAACATCTTGGTGATGTCCCTGGCTTTAGCGGATCTGCTGCTTGGATTGGTGGTCATGCCTTTCAGTATGATCCGTACTGTGGATGGCTGCTGGTATTTTGGAGAGTTCTTCTGTTTGCTGCACTCCACTTTTGACTTGTTTCTCACATCAGTGTCcatttttcatctaatttttattgcaattgaTCGATATCAGGCTGTTTGTTATCCACTCCAGTATCCTACAAGAATAACCATACCTGTCGCATGGGTCATGGTGATGATAAGTTGGAGCGTGGCTGCATTATATTCCTATGGTTTAGTGTACTCAAAAGCTAATGTGGAAGGACTGGAGGACTATATTGAATCAATATACTGTATGGGAAACTGCAATTTGCTTTTCAATGCATTGTGGGGAGCTATAGACACATTAATAGCTTTTCTCTTGCCTTGTTCTGTCATGATTGGCCTGTATGCAAGAATTTTTGTGATTGCAAAACAGCATGCTAGAAAACTCAATGATGCAAGTCAGCATGAAAATGAGAATATGTTTAAAAGTTCTCGACGATCTGAACGCAAAGCAGCAAAAACTCTTGGTGTGGTCGTGGgtgcttttattatttgctggttaccattttttataaattctttGGTTGACCCTTACATCAACTTTTCCACCCCACTTGTTCTCTTTGATGTGTTTGTCTGGTTAGGCTACATTAACTCAACCATAAACCCCATCATATATGGCCTTTTCTACCCATGGTTCAGAAAAACCCTTTATCTTATTataacattgaaaatatttgaaccAAACTCATCTGATGTAAATGTCTTCAGTGTTTGA

Function

symbol description
taar13e Enables trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR5 (trace amine associated receptor 5).

NR:

description
PREDICTED: trace amine-associated receptor 13c

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001594 trace-amine receptor activity molecular_function

KEGG:

id description
K05051 TAAR; trace amine associated receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220496.1 True 1026 mRNA 0.39 1 21886498 21887523

Neighbor

gene id symbol gene type direction distance location
taar13a taar64,taar13b,LOC107719423,LOC107697110,LOC107550388,LOC107697111,LOC107719422,LOC107697109 coding downstream 2070 21883406 ~ 21884428 (-)
LOC122325436 taar13c,taar13e,LOC107593251,LOC107685383,LOC107697111,LOC107550387,LOC107719422,LOC107697109 coding downstream 6319 21879154 ~ 21880179 (-)
LOC122325342 taar13e,LOC107697111,LOC107550387,LOC107593251,LOC107685383,LOC107550389,LOC107719422,LOC107697109 coding downstream 14734 21870742 ~ 21871764 (-)
taar15 LOC107719424,LOC107697112,LOC107550376 coding downstream 20612 21864888 ~ 21865886 (-)
stx7l stx7,stx7l,LOC107742733,LOC107685381,LOC107719425,LOC107697113 coding downstream 21981 21858076 ~ 21864517 (-)
taar11 taar11,LOC107550378,LOC107697081,LOC107733375 coding upstream 30295 21917818 ~ 21918804 (-)
LOC122325511 taar12f,taar12e,LOC107706946,LOC107550397,LOC107550396,LOC107697103,LOC107721014 coding upstream 47851 21935374 ~ 21936459 (-)
bmp2b bmp2b,LOC107742710,LOC107685371,LOC107593250 coding upstream 113690 22001213 ~ 22006248 (-)
chgb LOC107593248,LOC107667615,LOC107756670,LOC107742709 coding upstream 165534 22053057 ~ 22058826 (-)
gzf1 LOC107667619,LOC107600081,LOC107593244,LOC107742706,LOC107756665,LOC107697078 coding upstream 204549 22092072 ~ 22097205 (-)
G140888 NA non-coding downstream 41477 21844794 ~ 21845021 (-)
G140885 NA non-coding downstream 44153 21842126 ~ 21842345 (-)
G140884 NA non-coding downstream 44464 21841762 ~ 21842034 (-)
G140882 NA non-coding downstream 45733 21840515 ~ 21840765 (-)
G140801 NA non-coding downstream 112129 21771030 ~ 21774369 (-)
G140901 NA non-coding upstream 21468 21908991 ~ 21909359 (-)
LOC122325423 NA non-coding upstream 63223 21950746 ~ 21970149 (-)
LOC122325422 NA non-coding upstream 74673 21962196 ~ 21964129 (-)
G140940 NA non-coding upstream 152042 22039565 ~ 22041112 (-)
LOC122325129 NA non-coding upstream 174049 22061572 ~ 22067308 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 39581 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 41865 21842432 ~ 21844633 (-)
G140883 NA other downstream 45030 21841113 ~ 21841468 (-)
batf batf,LOC107697118 other downstream 145421 21732544 ~ 21741077 (-)
LOC122324936 NA other downstream 374015 21507244 ~ 21512483 (-)
G140972 NA other upstream 225079 22112602 ~ 22113044 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other upstream 1497048 23384571 ~ 23401391 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 1898229 23785752 ~ 23823050 (-)
G141502 NA other upstream 2117164 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 2366870 24254393 ~ 24517743 (-)

Expression


Co-expression Network