taar13a (taar64,taar13b,LOC107719423,LOC107697110,LOC107550388,LOC107697111,LOC107719422,LOC107697109)


Basic Information

Item Value
gene id taar13a
gene name taar64,taar13b,LOC107719423,LOC107697110,LOC107550388,LOC107697111,LOC107719422,LOC107697109
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21883406 ~ 21884428 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220499.1
ATGGATTTATCATTACAAGAATATGATCCCACTTTGTTGTGTTTTCCTGCAATGAACAGCTCTTGTCTTAAAGGTACACATCATGACGCTCAGACTGTCTTGTATGTCATGTTGGTGTCTGCGATGATTGTGACCATTCTAGGAAATTCAGTGGTCATCATCTCCATTGCACACTTCAAACAGCTTCAGACTCCTACTAACATCTTGGTGATGTCCCTGGCTTTAGCGGATCTGCTGCTTGGATTGGTGGTCATGCCTTTCAGTATGATTCGTTCGGTGGATGGCTGCTGGTATTTTGGAGATGCCTTCTGTTTGCTGCACTCCACTTTTGACTTGTTTCTCACATCAGTGTCTATTTTGCATCTTGTTTGTATTGCTATAGATCGACATCAGGCTATTTGTTATCCTCTTCAATATCCTACAAGAATAACCATACCCATTGCATGGGTCATGGTGCTGATAAGTTGGGCTATGATAGCAGTCTATTCATATGGTCTTCTGTACTCAAAATCTAATGTGAAAGGACTAGAGGAATATGTTGAATCAATTTACTGTATAGGACATTGCAGTCTGCTTTTCAGTAAATTATGGTCTGTTTTAGACACgttaataacttttttctttccttgttCTGTCATGGTTGGACTGTATGTTAGGATTTTTGTAGttgcaaaaaaacatgtaaGAACAATCAGTGAGGCAAACCAGCATGAAAATGAGAATGTGTTTAAAAGTTCTCAGCGATCTGAACGCAAAGCAGCAAAAACTCTTGGTGTGGTTGTGGgtgcttttattatttgttgGTTGCCATTTTTTATAAACTCTGTGATGGATCCTTACATCAACTTCTCCACACCACTTGCCCTCTTTGAAGTGTTTGTCTGGTTAGGCTACATTAACTCAACCATAAATCCCATCATATATGGCTTTTTCTACCCATGGTTTAGGAAAACCCTTTCTCTTATTGTAACAAGGAGAATATTTGAACCAAACTCTTCTGATAtcaacattttcacagtttga

Function

symbol description
taar13b Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR5 (trace amine associated receptor 5).

NR:

description
PREDICTED: trace amine-associated receptor 13c-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220499.1 True 1023 mRNA 0.39 1 21883406 21884428

Neighbor

gene id symbol gene type direction distance location
LOC122325436 taar13c,taar13e,LOC107593251,LOC107685383,LOC107697111,LOC107550387,LOC107719422,LOC107697109 coding downstream 3227 21879154 ~ 21880179 (-)
LOC122325342 taar13e,LOC107697111,LOC107550387,LOC107593251,LOC107685383,LOC107550389,LOC107719422,LOC107697109 coding downstream 11642 21870742 ~ 21871764 (-)
taar15 LOC107719424,LOC107697112,LOC107550376 coding downstream 17520 21864888 ~ 21865886 (-)
stx7l stx7,stx7l,LOC107742733,LOC107685381,LOC107719425,LOC107697113 coding downstream 18889 21858076 ~ 21864517 (-)
LOC122325101 LOC107685380,LOC107593252,LOC107550373,LOC107742734,LOC107550386,LOC107719391 coding downstream 29154 21852059 ~ 21854252 (-)
LOC122325446 taar13e,LOC107719422,LOC107550389,LOC107697109,LOC107593251,LOC107685383,LOC107697111 coding upstream 2070 21886498 ~ 21887523 (-)
taar11 taar11,LOC107550378,LOC107697081,LOC107733375 coding upstream 33390 21917818 ~ 21918804 (-)
LOC122325511 taar12f,taar12e,LOC107706946,LOC107550397,LOC107550396,LOC107697103,LOC107721014 coding upstream 50946 21935374 ~ 21936459 (-)
bmp2b bmp2b,LOC107742710,LOC107685371,LOC107593250 coding upstream 116785 22001213 ~ 22006248 (-)
chgb LOC107593248,LOC107667615,LOC107756670,LOC107742709 coding upstream 168629 22053057 ~ 22058826 (-)
G140888 NA non-coding downstream 38385 21844794 ~ 21845021 (-)
G140885 NA non-coding downstream 41061 21842126 ~ 21842345 (-)
G140884 NA non-coding downstream 41372 21841762 ~ 21842034 (-)
G140882 NA non-coding downstream 42641 21840515 ~ 21840765 (-)
G140801 NA non-coding downstream 109037 21771030 ~ 21774369 (-)
G140901 NA non-coding upstream 24563 21908991 ~ 21909359 (-)
LOC122325423 NA non-coding upstream 66318 21950746 ~ 21970149 (-)
LOC122325422 NA non-coding upstream 77768 21962196 ~ 21964129 (-)
G140940 NA non-coding upstream 155137 22039565 ~ 22041112 (-)
LOC122325129 NA non-coding upstream 177144 22061572 ~ 22067308 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 36489 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 38773 21842432 ~ 21844633 (-)
G140883 NA other downstream 41938 21841113 ~ 21841468 (-)
batf batf,LOC107697118 other downstream 142329 21732544 ~ 21741077 (-)
LOC122324936 NA other downstream 370923 21507244 ~ 21512483 (-)
G140972 NA other upstream 228174 22112602 ~ 22113044 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other upstream 1500143 23384571 ~ 23401391 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 1901324 23785752 ~ 23823050 (-)
G141502 NA other upstream 2120259 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 2369965 24254393 ~ 24517743 (-)

Expression


Co-expression Network