zpax1 (LOC107603073)


Basic Information

Item Value
gene id zpax1
gene name LOC107603073
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22758359 ~ 22763879 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220501.1
CACCTGTGCACAAGAGCTAGCTGATTCAAACGTTTCCTTTCAGAAAGCTTCACGCACGTTATTTTGCACAGCTTTTGTGCTAGGAAGATTTGAATTGTGGTTTCCATAGATCTTGACCGCCTGAAAACAGAGAGGATGACATGGCTTCTTGGGATTTGCACGTTTTGGCTGCCGGTGGTAGCGGTTTTGTCACAGAAGAATTTCAATGTGGTGCCAACCCAGAATCTTAACCACCGAACGGGCCTGAAGACTGATTGTCTAGGAGGCTATATGAGGCTAACCGTAGATAAGTCTCTAGCTTTTGGAAATCAAGTTGAATTTGATGCTCTCAatGGCTCCCAAATTGAACCTTTAACTCCAAGCCTGTCTGCCAAATGTGGTTTTACTATAGACTCGGATCCCTGGGGTAACTACAGAGTCTTCGCATCTTTCCTCAATTGCTTTGCAGGAAATGAGGATGATAGCATGATTGATATTGACATGCGCGTCAGGGTGCAAGGTGTCAACGCAGAACAAGATGTCCTTGAAGTGACGAAGACCTGTAAATATGACCAATGGGCCCCCCGTGAAGTTCTTTGCACTCAGAATTATATGGAGGTGTCTGTTAACAGATTGCCAGAAGAGATTACAGCTTTGCGTAGACGACCTATGCCTCGAGCAAACGTTTTTGCTAACCAGTGGAGCGATACTGTTCCTGAGGCCATTACGTCTAGGTTCAATATATGGAGAATGGTGTTTTTCACTCCTGAACAAAAACCTATGGTGTTGGAGGATGCCCTGAAGGCTGGATATGGTATAACAACGACCAAGTCTCGATTGGTGCTACGGAGCGGTTATGACATGCCCGAGACCTATCTGAAAAATGTGAATGGCGTGCCAATGAAGATCATCAGGTTGACCACCTACTTCAAGAAACAGTGGTCGGTAACCATGTTGGATACTGTTGCTGCATGTCCAACTGGTGGACTTTCTTTTACGGATGAGGAGATCACCTGGAACTTCCCCCGGTTTAATCCACTAATGAGTTCTTCTCAAACAAGTCTCCTTGGGATGTTCATGGGAATAAATGGGAAGCTGATAGATTCTGCAAAAATGACCGCTAGAGGCTATGTTTTGTCTGTAGTAGACGATCAGATCATAATGACAATACCAATCGGTGGACCAGATGGCTATTACAAGAGTCATGCTGTAAACAACCTGTACCATATCACATACAACATTGAGCCAATGTTGGAGTTACTGTGGAGTGAGGGAGGCATGGATGCTACAAGATACAGAGTCCTCTTCACCATCATGACCCCTCTTATGCCTCGACCACCCCGTTTTGTCGACTTCACTGATCCAGACCAAAGGCTGTTTGATGTATTCTTGGGTCCTTTCCTTTATGACATCGAGTTGGTGAACCTCACTTTTTCCACTGGAGTCCTTACTGTGGCAGAGGCCAGTGCAAGTGGCATCAACATACAAGAACAAACCTTTCAAAATGGCTCCAAGGCGTTTAGACTTCAAGTTCCCTTCTCTCTTTCCTTTGTTGTGAGAACTCAAGTCGATCTGACTGTTACAGTATATACTCTTTATGTCACTTTCGGTTTTATGATCCTGCCTGAATACACGCCATTCTCCCAAACCGAATCTGTTGACGTATCCCTTAGAGATGTCACTCTTCCAACTGTGAGTGGATCCTGTGACGATGAAAAATTCTATGTTGtaatttcatttggaaacatgggcaagaattttaatattatgatgGGTATGCATGACATAACTCCAGACCAGAGAGCAGAGTACTATCAAATGGAGAATGCCACTCATATGAGCTTGGCAGTGCCTTTCCTTTCGCCTGATGTTGTGTTTGAGTTGATGTATCCATCATCCTTAAGGGTTCGGCTTGATGTATTACTATGGGAGCCCATAAACAGATGGACACTAAGTGACTTCTCCCTTGCTTGCAATTTTCCCATGACCATGACTGAGTGTTTCAGCAATGGCACCATGTCAGCCCTCGCAGTGAAGGTAGAATCCGTCCCCCAGCTTGATCCTAGTCAGCTTACCCTGAGTGATCCCTCATGTAAACCCAAATTCAGCAACGATCGCTTTGCCTACTTCTCTTTTGAAGCAAACAGTTGTGGAACCACTAGAACGTTCTATGATGGAGTTGTGATGTATCAAAATATAATCTCTCTGGGTAATGCGCTACCCATTTACAAGCAAAGTCAAAAGGGAGAACCCATGAGTCCTCCTGATCCAGAATATCGTGTGACCATGTCCTGCTTTTACACGCTAAATTCTACCCAGACAATTGCTTTCTTCACAAAGCCACGGGAAAATGAACCTTTGCCAGAGACTGGTTTTGGAGAGCTGCAAGTTGTACTGAGACTTTCTTGGGATGGCTCTTATAGTAACTTCTATGTGAAGGAGGATTACCCAGTAGTACAGCACTTAAGAAGTCCTCTGTTCTTTGAGGTGGCGCTGCTGCAGTCCACTGATCCTCAGATCAAGCTAGTGCTGGAGCACTGTTGGGCTACTATGAAGGAAGACCGGAACTCCACTCCATCATGGGACTTGATCGTAGATGGCTGTGTGAATCTGGCTGACCGTTATGAGACCATTTTCCACCCTGTTGCTCCTAACAGCATTCCATACCCATCTCATGTGACTCGTTTTGAAGTCAAGATGTTTACTTTTGTTCAGAATGATGTTGCAGTTCAAAATCAGGTTTTTGTACACTGTGACGCTATACTTTGTGACGATGTGACTAACGGAATCTGCAAGAGACAATGCCCATCTTCTATTCCTCTAAAAACTGGAAAAGTGCGAAGAGAGACGACTAATTTCCTGTTCCGGAGAACACGGCTGTCATCAGGAAAAATATTGCTGTCAAGCTCTTAGTCAGGATTCCCCAACACACCCCCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107603073

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220501.1 True 2916 mRNA 0.45 21 22758359 22763879

Neighbor

gene id symbol gene type direction distance location
ttc32 ttc32,LOC107678832,LOC107743292,LOC107697098 coding upstream 380 22755992 ~ 22757979 (+)
laptm4a laptm4a,LOC107678852,LOC107726758,LOC107603102,LOC107743288 coding upstream 14082 22739633 ~ 22744277 (+)
mark3b mark3b,LOC107697167,LOC107743287,LOC107678848,LOC108412004,LOC107726756 coding upstream 20232 22686572 ~ 22738127 (+)
runx2b runx2b,runx2,LOC107678859,LOC107726745,LOC107697170,LOC107603075 coding upstream 96041 22622388 ~ 22662318 (+)
mmut mut,LOC107726757,LOC107697172,LOC107726528,LOC107667609 coding upstream 220498 22518165 ~ 22537861 (+)
mixl1 LOC107743324,LOC107697096,LOC107726752,LOC107678837,LOC107603100,LOC107549665 coding downstream 3956 22767835 ~ 22769876 (+)
LOC122325427 NA coding downstream 23586 22787465 ~ 22789136 (+)
efr3bb efr3bb,ccl33.2,LOC107726755,LOC107678842,LOC107697142,LOC107549699 coding downstream 43280 22807159 ~ 22839446 (+)
LOC122325208 LOC107726734 coding downstream 114871 22878750 ~ 22882976 (+)
LOC122325206 LOC107726734 coding downstream 120228 22884107 ~ 22888671 (+)
G141091 NA non-coding upstream 200857 22557229 ~ 22557502 (+)
G141084 NA non-coding upstream 215827 22542136 ~ 22542532 (+)
G141081 NA non-coding upstream 217032 22541118 ~ 22541327 (+)
LOC122324401 NA non-coding upstream 643492 22098405 ~ 22114867 (+)
G141121 NA non-coding downstream 156814 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 302708 23066587 ~ 23073665 (+)
LOC122324747 NA non-coding downstream 430742 23194621 ~ 23206082 (+)
G141207 NA non-coding downstream 566312 23330191 ~ 23332366 (+)
G141216 NA non-coding downstream 624613 23388492 ~ 23408824 (+)
matn3a matn3a other upstream 4198 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 240676 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 281585 22471761 ~ 22476774 (+)
G140785 NA other upstream 913658 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 1556397 21168775 ~ 21201962 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 78926 22842805 ~ 22860327 (+)
pln NA other downstream 579836 23343715 ~ 23351655 (+)
G141475 NA other downstream 1308992 24072871 ~ 24074423 (+)
G141524 NA other downstream 1676364 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 1693111 24456990 ~ 24482661 (+)

Expression


Co-expression Network