ttc32 (ttc32,LOC107678832,LOC107743292,LOC107697098)


Basic Information

Item Value
gene id ttc32
gene name ttc32,LOC107678832,LOC107743292,LOC107697098
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22755992 ~ 22757979 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220502.1
ctcattaatattcatgagttcGCTGTCGTCCGCACGCGCGTCTCATGGAGAGCGGCGAGCTCGCGATCCTGCAAAAAGCAGACGACGAGTTCAACAGTAAGAATTATAAACCAGCAGAGGAATTGTACACAAAATTCATCGAGTCCTGCGCCAAATCTAGAGACTGCGCCGCTCATGATTTGGCCGTTGCCTATAACAACCGAGGGCAGGTGAAGTATTTGCGGGTGGACTTTTATGAAGCAATGGATGACTATACCTCTGCCATACAGATCAACAATCGGTTCGAAGTGCCACTTTATAACAGAGGATTGATACGTTACAGATTGGGCTTTTTCAAGGATGCCGAGAGTGACTTTCGGAGAGCCCTGGAACTGAATCCTAATTTTAAAGATGCTAAAGAAAGTCTGCAGCAGACACTACTGGACCATGAAGAAAAGTTGAAGAGGGAACCCAGTCATCAAGCTCATTAAACTCTTAGATATATTGTCACACGCGGTCCAAGAACGTATGATTGTGCAATTATGAGCTGAAATGATGTTCAAACATTTAGGCCTGGTTTCCAGACAGGGCTTGACTCAAACCAGGAATTTTTTAAGACCATTTATTGTAcgttatttcagttaaaatggCTTCTATGTTCTGGGACTATGATTTAGCcatgtctgtgaaaccagggttAATGTTTCTATATGTAGACGGGGACAGATTTATTAACCTGCTGCAAGTCCTTGAAAGTTTGTGAATAAAAAGCCAGTACTGTTGGTCAGTGCTCAAGATATGGGTGAATactgttgtaaataaaaagcagtgTACATTTCAGAACAATTGTTGATTTTTCCAGtcacaaaaaaggttttttaataaactctttctttaaaattgta

Function

symbol description
ttc32 Orthologous to human TTC32 (tetratricopeptide repeat domain 32).

NR:

description
tetratricopeptide repeat protein 32

GO: NA

KEGG:

id description
K24946 TTC32; tetratricopeptide repeat protein 32

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220502.1 True 884 mRNA 0.41 3 22755992 22757979

Neighbor

gene id symbol gene type direction distance location
laptm4a laptm4a,LOC107678852,LOC107726758,LOC107603102,LOC107743288 coding upstream 11715 22739633 ~ 22744277 (+)
mark3b mark3b,LOC107697167,LOC107743287,LOC107678848,LOC108412004,LOC107726756 coding upstream 17865 22686572 ~ 22738127 (+)
runx2b runx2b,runx2,LOC107678859,LOC107726745,LOC107697170,LOC107603075 coding upstream 93674 22622388 ~ 22662318 (+)
mmut mut,LOC107726757,LOC107697172,LOC107726528,LOC107667609 coding upstream 218131 22518165 ~ 22537861 (+)
mfsd2b si:dkeyp-115a10.3,mfsd2b,LOC107750078,LOC107697177,LOC107603080,LOC107667608 coding upstream 257384 22478061 ~ 22498608 (+)
zpax1 LOC107603073 coding downstream 380 22758359 ~ 22763879 (+)
mixl1 LOC107743324,LOC107697096,LOC107726752,LOC107678837,LOC107603100,LOC107549665 coding downstream 9856 22767835 ~ 22769876 (+)
LOC122325427 NA coding downstream 29486 22787465 ~ 22789136 (+)
efr3bb efr3bb,ccl33.2,LOC107726755,LOC107678842,LOC107697142,LOC107549699 coding downstream 49180 22807159 ~ 22839446 (+)
LOC122325208 LOC107726734 coding downstream 120771 22878750 ~ 22882976 (+)
G141091 NA non-coding upstream 198490 22557229 ~ 22557502 (+)
G141084 NA non-coding upstream 213460 22542136 ~ 22542532 (+)
G141081 NA non-coding upstream 214665 22541118 ~ 22541327 (+)
LOC122324401 NA non-coding upstream 641125 22098405 ~ 22114867 (+)
G141121 NA non-coding downstream 162714 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 308608 23066587 ~ 23073665 (+)
LOC122324747 NA non-coding downstream 436642 23194621 ~ 23206082 (+)
G141207 NA non-coding downstream 572212 23330191 ~ 23332366 (+)
G141216 NA non-coding downstream 630513 23388492 ~ 23408824 (+)
matn3a matn3a other upstream 1831 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 238309 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 279218 22471761 ~ 22476774 (+)
G140785 NA other upstream 911291 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 1554030 21168775 ~ 21201962 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 84826 22842805 ~ 22860327 (+)
pln NA other downstream 585736 23343715 ~ 23351655 (+)
G141475 NA other downstream 1314892 24072871 ~ 24074423 (+)
G141524 NA other downstream 1682264 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 1699011 24456990 ~ 24482661 (+)

Expression


Co-expression Network