trib2 (trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179)


Basic Information

Item Value
gene id trib2
gene name trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22150436 ~ 22158928 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220514.1
AGATAATTTAGGGTGCTTCAATTAAACTCCAAGGGCAACAATTATCTCACATGACTGCACGGATGGCTCGCTCGCAAGACTGTGGATGTGTCAGCATCAAGCGAGCGGCCAATGGGAGCGCGTCTCGGCCGTGACGTCAGGGGGGCTGGTCGTGCGCGTGGAGAGCTCCAGTCAGTCCCGCGAGcgcagtcagtcagtcagtgcGTGCAGCTGACCCCGCGCGTTCAATGGACTAGGTTCCCAGCCacgtaagtaaaaaaaaagaagacgaTGGTGATAATGGTGTCTTGTTGCTGAAACAAGGGATAGGCCCGGGGAGAACGTCGGCCGTCCCCTCTTGCCTTTGTCCGAATCAGATCCGAGCGCCGGAGATCGTCGGAGTTTGGTTGCTCGCGAAGAGGAGGACATCTACTTCCCAGGCGTAACAAAAGGCGGCTCGcgacctggaggaaattttttcctAGCCATATTTGGTAGATGCACGGACGGGCTTCGCGTGGGGATCCGCTCGAATGAACACGGAGCGCCCTCTCAGGATATCTAAACCCggcttttaatttaatgcaaaaaaaacccccgtTCTTTACCTGCTGCGCTGCATCGGCCGTGACGTCACAGCCTGTACATTACATACACCGCGCCGATTCACGcgttttgggctttttttttttttttttttttttttttttgcaaccgaACCGTGCTGTTCTTTGAGGGCACGCTGAGCATAGAGGTCACAATTCATGCATGCACGTCATCGCATGTGTGCTCAAATGACGCCACATTGCCGGTGCAATTAACGCACATGCATAAGATCATCATTACAGTCAAGGGGAATCGCCGCTGCCTTCATGCCCAGTGTTAAATAGAGGGCATCTGTCTGTCATTCACTTCCAACCCCCTCCTCCGAGACCGTCTGAACCCTCCTGATCTGGACGAACCTCCTCCTATACTCATGAACATACAGAGATCCAGTCCCATTAACATTTCGCGTTATGGGAGATCGAGGCACAAAGCACACGACTTTGAGGAGCTATCTTGTCTAAGGACTACAGAATCCAACCAGAGTTTCAGTCCCAATTTAGGATCTCCCAGCCCCCCTGAGACCCCTGACTCCTCTCACTGCATTTCTTGCATTGGAAATTACCTTTTGTTGGAGCCCATTGAAGGAGACCACGTTTTTAGAGCCACCCACCTGCACAGTGGGGAAGAGCTCGTGTGCAAGGTGTTTGATATCAGTCGATACCAAGAGTCCTTGGCCGCTTACTTCGTGCTGGGCACCCATGAGAACATTAACCAGATAGTGGAGATTCTTCTGGGGGATACGCGAGCGTACGTGTTCTTCGAGAGGAGCCATGGCGACATGCACTCTTTCGTTCGCACTTGCAAGAAGCTGCGAGAGGAAGAGGCTGCCAGACTTTTCCATCAGATAGCATCAGCTGTGGCGCACTGCCACGACAACGGCCTGGTCCTCAGAGACCTCAAGCTGAGGAAGTTCGTCTTTAAGAACGAGGACAGGAATCTTGTAAAGTTGGAGAGTTTGGAAGACACGTACCTTTTAGAAGGAGGTGACGATTCGCTCTCGGACAAACACGGCTGTCCGGCCTACGTCAGCCCGGAAATCCTCAACGCCAATGGCAGCTACTCTGGTAAGGCGGCGGACGTGTGGAGCTTAGGCGTGATGCTCTACACCATCCTGGTGGGCCGCTACCCGTTCCACGACGTGGAGCCCAGCTCGCTGTTTAGCAAGATCCGGCGCGGCCAGTTCAGCATCCCCGAGACGCTAACGCCCAAAGCCCGATGCCTCATCCGTAGCATCCTGCGGCGAGAACCGGCCGAACGCCTCACCTCCCGAGAGATCCTGGACCATCCCTGGTTCTCAGCCTCCGGCGGTTCAGCCGCCGCCGCCAGCCACGGAAGAGGAGAGCGAGACTTGGACCAAATGGTGCCAGAGGCCAACATGGAAGAAGAACTAGAACAGTTCTTTAGCTGAGCACAAACTCGTCAGACATTATGCCACGCCCTTTTagattatcaaaaaaaaaaaaaagaaatacactcATTACAAATGGTGTCTATCGTTATATCTCATTCCGTGAAAAGACATGGTCTGGCTGCTGGACTTCTGGACGAAGCGCGTCGGGTGATGTAGCAAGACTTACTTcggtttttcttttatttccgtTCGTTTATGTCTTCGTTTTACGTGGTGCTCACGAGGCGTACGAGTAAGCTACAAACATGCATTACGGCACAGGAGAACGCAGCCAAGGAACAAAGAAAATATCAGGCGAAACTGCTCAGCCTCTCCTGTTTCCAGCTCTGATTTGTCGACTTGCGCCTCAGTTACCCGTTTTCTTCGAATGCAAATCGTCGGTCGCGTCTCGATCTTATTTTAAAGCATAGCGTTTCGACAGCCCTCCAGGTCAACGCCGCGAAGACCatgtagtttattttttgcGTTTGGATTCATTTCGGCTGCATTAAGAATGATTTGTGTTGCATTAAGCTGTTCCTTTTACTATTATTGCTGCTTTTTCCCGCTCTAACCATAACTGAAACTTTCTCCGTGAGTCttcagagaataaaaaaacgtCAAGCACTTGACTCGCCTAGGCTTGGAGATCCTCTCTGGACTAGTGTCATCTATTTAACTTTtagttgttttcttttgctgGAGCAAaatttatgttcttttttttttatttataaggtTACTACTACtatatttaaagacaaatacgtgcagggtttttttttttttttttttctccgttaTTTTCTTAACCGCCAGTTTTCGCGAATATTGTAGGCAATATAATATTGACACAGGACAGGTTTGAGTTTTTGTATCAAAGTTTGTCCCAAGTTGGAAGGTCTACGATTTAACGTCAGTGCCAGTAATCACGCACCCCAAACGCACGCCGACcgtacttttttatttgtcattttttcctCTTGGTTTCGTTCTGTTTCTTTGCATTTGACTCCATAAATATTAGACGATATTTCTACGACTACACCGTCTCGAGTACCTCATGTTAACTCTACTGCCTGCATAGGTCTGTGAAATGATCATGTTTTGAATGGGTACATGTAGACATGTTTCGTCGTATATCAATGTTACTTGAAATCGTGATTTATATCTAGTCAATGGCATGTGCCCTATGAATGCTTTAGCCTGCCTAGCAAGAGGGGAgttcattttttcagtttcgttttcttaaagaaaaatcTTACGAAGGATTTACTAGGAGTCCAATTGCGCTTAAGAGTTTCTTttcggttttttttttggttttgtttttcctctggTCATTGTGCTTTCACTCGTTTTGTAGAAGGAACTTTTGCCTACCTAAGTTGGTGCTGATTAGGTGCTAATTTTGaaggatgtttttctttttcgtttgttcatttttttttttttttttttcacatgtttTCGAGGGGAGGGGGGAGTGCATGGTGGGATATCTGCCTCAGATGCTCTGATTGTAATGTAACAGATTTTTGGTGTTTTGTCcagatttattcagtaaataaattgTGAACTGCACACTGAA

Function

symbol description
trib2 Predicted to enable mitogen-activated protein kinase kinase binding activity. Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and regulation of MAP kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human TRIB2 (tribbles pseudokinase 2).

NR:

description
tribbles homolog 2-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08814 TRIB1_2; tribbles homolog 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220514.1 True 3566 mRNA 0.47 3 22150436 22158928

Neighbor

gene id symbol gene type direction distance location
napbb si:rp71-81o21.2,napb,LOC107756672,LOC107667620,LOC107742707,LOC108411873,LOC107593246,LOC103023605,LOC106571745,LOC106610947,LOC100691502 coding upstream 58654 22085016 ~ 22091782 (+)
gpcpd1 gpcpd1,LOC107593247,LOC107742708,LOC107756671,LOC107697181 coding upstream 67819 22067984 ~ 22082617 (+)
trmt6 trmt6,LOC107667616,LOC107697184,LOC107593280 coding upstream 93222 22046439 ~ 22057214 (+)
fermt1 fermt1,LOC107697185,LOC106571740 coding upstream 104890 22032996 ~ 22045546 (+)
LOC122325417 taar12j,LOC107756662,LOC107756663,LOC107550380,LOC107550381,LOC107697080,LOC107697079,LOC107756661,LOC107550395 coding upstream 189067 21960347 ~ 21961369 (+)
LOC122325512 klhl29,LOC107667613,LOC107742703,LOC107697176 coding downstream 126719 22285647 ~ 22394434 (+)
mfsd2b si:dkeyp-115a10.3,mfsd2b,LOC107750078,LOC107697177,LOC107603080,LOC107667608 coding downstream 319133 22478061 ~ 22498608 (+)
mmut mut,LOC107726757,LOC107697172,LOC107726528,LOC107667609 coding downstream 359237 22518165 ~ 22537861 (+)
runx2b runx2b,runx2,LOC107678859,LOC107726745,LOC107697170,LOC107603075 coding downstream 463460 22622388 ~ 22662318 (+)
mark3b mark3b,LOC107697167,LOC107743287,LOC107678848,LOC108412004,LOC107726756 coding downstream 527644 22686572 ~ 22738127 (+)
LOC122324401 NA non-coding upstream 35569 22098405 ~ 22114867 (+)
G140933 NA non-coding upstream 48975 22101238 ~ 22101461 (+)
G140931 NA non-coding upstream 52144 22097911 ~ 22098292 (+)
G140922 NA non-coding upstream 88903 22061063 ~ 22061533 (+)
G140905 NA non-coding upstream 171888 21933984 ~ 21978548 (+)
G141081 NA non-coding downstream 382190 22541118 ~ 22541327 (+)
G141084 NA non-coding downstream 383208 22542136 ~ 22542532 (+)
G141091 NA non-coding downstream 398301 22557229 ~ 22557502 (+)
G141121 NA non-coding downstream 761765 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 907659 23066587 ~ 23073665 (+)
G140785 NA other upstream 305735 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 948474 21168775 ~ 21201962 (+)
G140533 NA other upstream 1047926 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1358733 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1476047 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 312833 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 347799 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 585484 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 683877 22842805 ~ 22860327 (+)
pln NA other downstream 1184787 23343715 ~ 23351655 (+)

Expression


Co-expression Network