LOC122325472 (dhcr24,LOC107687183,LOC107581458,LOC107566150)


Basic Information

Item Value
gene id LOC122325472
gene name dhcr24,LOC107687183,LOC107581458,LOC107566150
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 9983522 ~ 9985904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220519.1
CGAAAACACAGATGACAAATTACGGCTGACCGAGTCTGGAAGCTGCGCGCGAAAGGAGTCCGAGAAATCGCATTAAATAACAGTTCGTCAGACCGCGCCGATGCGTGCGGTTTTATGTTCGTCCGCCAGCGAATACAAACGAAAATCATTTGTTAAATCCAAAGCCAGCAGCAAGCTCCAtgcgtttttacattttttagattCGTGACTTTAAAAAGCTGCCGGAATGGATCCGTTGTTATATCTGGGCGGGCTAGTTGTCTTGTTTTTGGTGTGGATTAAGGTGAAGGGCTTGGAGTACGTGATAGTACACCAGAGATGGGTCTTCGTTTGCCTTTTTCTGCTCCCTTTATCCGTCGTCTTTGATGTGTACTATTACCTGCGCGCGTGGATCATCTTCAAGATGTGCTCAGCGCCCAAGCAGCACGACCAGAGAGTCAGAGATATCCAGAGACAGGTGCGAGAATGGAAAAAAGAGGGAGGGAAGAAACACATGTGCACAGGTCGTCCGGGATGGCTGACTGTATCTCTCAGGGTCGGAAAATACAAGAAGACGCACAAGAACATCATGATTAACATGATGGACATTCTGGAGGTGGACACAAAACGGCAGGTGGTGCGTGTGGAGCCCTTAGCTAACATGGGTCAGGTGACCGCTCTGCTCAACTCTATTGGCTGGACGCTGCCTGTGTTGCCTGAACTTGATGACCTCACAGTTGGTAGGTTTTATGAAAGATATCaacaaatattgaattattcCTGCATCATTTACTGGATGTTTCAGGAAGCTCTTCCTGAACTTACTATTTCATTTATTGTCAAATGTTCAGTGTTTTTCGCATTGGTATGA

Function

symbol description
dhcr24 Predicted to enable delta24(24-1) sterol reductase activity. Predicted to be involved in steroid metabolic process. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and membrane. Is expressed in cranial ganglion; lens; solid lens vesicle; telencephalon; and yolk syncytial layer. Human ortholog(s) of this gene implicated in lipid metabolism disorder. Orthologous to human DHCR24 (24-dehydrocholesterol reductase).

NR:

description
PREDICTED: delta(24)-sterol reductase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220519.1 True 850 mRNA 0.46 4 9983522 9985904

Neighbor

gene id symbol gene type direction distance location
dsg2.1 dsg2.1,LOC107687165,LOC107745992,LOC107588893,LOC107559724,LOC107712898 coding downstream 258106 9713267 ~ 9725416 (-)
zmp:0000001074 LOC107559725,LOC107656729 coding downstream 272048 9701899 ~ 9711474 (-)
ttr ttr,LOC107712897,LOC107588917,LOC107687167,LOC107712388,LOC107656732,LOC107559732 coding downstream 299610 9680846 ~ 9683912 (-)
LOC122325172 NA coding downstream 317723 9659140 ~ 9665799 (-)
LOC122325171 NA coding downstream 324829 9655671 ~ 9658693 (-)
psma8 psma8,LOC103029839,LOC100304914,LOC107572146,LOC107723426 coding upstream 473287 10459191 ~ 10462437 (-)
gpr132b LOC107561042,LOC107723405,LOC107701477,LOC107684800,LOC107746348,LOC107572145 coding upstream 491785 10477689 ~ 10484360 (-)
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516,LOC107572140 coding upstream 498602 10484506 ~ 10493235 (-)
cdc42bpb cdc42bpb,LOC107684799,LOC107746049,LOC107723369,LOC107701514 coding upstream 508182 10494086 ~ 10550573 (-)
enpp5 LOC107701510,LOC107684795,LOC107589043,LOC107746078,LOC107723350,LOC107561943 coding upstream 635276 10621180 ~ 10627044 (-)
G137267 LOC107712887,LOC107559744,LOC107755683,LOC107687178,LOC107581453 non-coding downstream 447445 9459505 ~ 9536077 (-)
G137264 adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833 non-coding downstream 535611 9440237 ~ 9447911 (-)
G137255 NA non-coding downstream 578981 9404130 ~ 9404541 (-)
G137253 NA non-coding downstream 582313 9400382 ~ 9401209 (-)
G137250 NA non-coding downstream 590293 9392950 ~ 9393229 (-)
G137346 NA non-coding upstream 222170 10208074 ~ 10208585 (-)
G137348 NA non-coding upstream 246120 10232024 ~ 10235306 (-)
G137356 NA non-coding upstream 292035 10277939 ~ 10278186 (-)
G137441 NA non-coding upstream 472349 10458253 ~ 10458790 (-)
G137448 NA non-coding upstream 570841 10556745 ~ 10562461 (-)
G137330 NA other downstream 44645 9937965 ~ 9938877 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other downstream 232139 9697662 ~ 9751383 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other downstream 282984 9691124 ~ 9700538 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 648461 9325653 ~ 9335061 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other downstream 700139 9255548 ~ 9283383 (-)
G137451 NA other upstream 581393 10567297 ~ 10570737 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 736017 10721921 ~ 10724069 (-)
LOC122324412 nme6,LOC107589089,LOC107697297,LOC107723520 other upstream 1145520 11131424 ~ 11136612 (-)
LOC122325476 cdh2,-,cdh4,LOC107561048,LOC107746014,LOC107571545,LOC107701519,LOC107684812,LOC108416271,LOC107656023,LOC107590155,LOC107728629,LOC107739294,LOC107553647 other upstream 1156041 11141945 ~ 11182183 (-)
gsx2 gsx2,LOC107601899,LOC107597471,LOC107683998,LOC107755223,LOC107718430 other upstream 1381019 11366923 ~ 11368490 (-)

Expression


Co-expression Network