CI01000001_11089521_11092848


Basic Information

Item Value
gene id CI01000001_11089521_11092848
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11089420 ~ 11093631 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11089521_11092848.mRNA
AAAGGTTAAAAATGACGCCTATTCAAATTTACATATGAATTTTTGAATGATCTAAATGTAATTTATTTTAAATCATTTTAAGATATTTTGTGTCCCCTTTCTTAAAGTGATACTTCACACAAAAATGAAAATTCAGTCATCATTTACTCATCCTCAGGTTGTTCCAAACCTGTATAAATGTCTTTGTTCTGTTGAACACAAAGGAATATATTTTGAAGAATGTGGGAAACTGAACAGTTCTGGGGCTCCATTGACTTCCATAGTAAGTCAATGGTGCCCCAAAGCAGCCTGGTTACAAACTTTATTCAATATATCTTCCTTTGTGTTCAACAGAACAAAGAAACTTATACAGGTTTGGAACAACCTGAGGATGAGTAAATGATGACAGAATTTTCATTTTTGGGTGAACTATCCCTTAGGTTTACTAACTGCCCCAGTTAGTCAGAGAGCAACTCCTGCCAAAAGGTGGCAGCATGAATCTGTTTGATGGTCTGTTTTTGGTACATAACAGATTCGCCAAATAGAAGAAGAGTGTTGTCGTAGCAACCTGAAGCTTAATCGAAGGAAAACTGTCCACAGCTTTTGTTATTCAGTAAAACAGATGCCTAGAAGCAGGCTCTACTTTGTTATTTGACAGAAACAAATTTTAACACTGGTACGTATATCCGCGGTTAGAAGTCACACGTTTTGTGTAAACCGCTCGTTTACGAGACGAACAAGCCTTTAGTGCTGTGCTCAATTTCACAGCTTAATCTCACATGATGTCGTATTTTGTCTAGTCCAATGTCGGTGGTAAACACTCTGGTTCCAGCCCGTTTCTTGACTCTCGTCGCGCATCTTGTAATAGTAATCATCATATTCTGGTCTCGGGAGAACAGTGTCAGAGCTTGCCTACCACTAGACTACACTAATGAAGAATACAGGTTGGAGGACACGAGAATTTTATTTAACTGTCACTTTGCAGCTATTGGATGTCATGCCAGTGGCTCTGTGGCTTTGGCCTTCTTCTTATTTGAGCAATGGGCCTGCACCATCTACTGGTGGATCTTTGGCTTCTGTAGTGTGATTCCAGCACTATATGAGATGATCCTCTTTGTTGTAGTGTTTGGATTTAAGAGGAAGCCTCTTTGAGTGTCTCTGCCCTCTTGGTTCAGGCGAGTCAGATATTGTCCTTCCATCACCGATGTACCAGAATCACCTGAATTCAGAATAACTTTCACTGGACCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11089521_11092848.mRNA True 1232 mRNA 0.40 4 11089420 11093631

Neighbor

gene id symbol gene type direction distance location
CI01000001_11034064_11048961 C1QL4.L, C1QL4, C1QL4A, C1QL4B coding downstream 40459 11033863 ~ 11048961 (-)
CI01000001_11004027_11004884 NEUROD4 coding downstream 83787 11003614 ~ 11005633 (-)
CI01000001_10983526_10986681 NA coding downstream 102509 10982183 ~ 10986911 (-)
CI01000001_10896443_10925951 ZNF385A coding downstream 163469 10896208 ~ 10925951 (-)
CI01000001_10862471_10864514 NA coding downstream 223650 10862225 ~ 10865770 (-)
CI01000001_11210296_11213607 NA coding upstream 116593 11210224 ~ 11213607 (-)
CI01000001_11288035_11293399 NA coding upstream 194397 11288028 ~ 11294083 (-)
CI01000001_11385404_11386042 NA coding upstream 289951 11383448 ~ 11388934 (-)
CI01000001_11397805_11428592 CASZ1 coding upstream 303765 11397396 ~ 11428663 (-)
CI01000001_11446246_11449035 NA coding upstream 352255 11445886 ~ 11449066 (-)
G20230 NA non-coding downstream 60643 11022127 ~ 11028777 (-)
G20292 NA non-coding downstream 96422 10989294 ~ 10992998 (-)
G20247 NA non-coding downstream 161015 10920474 ~ 10928405 (-)
G20268 NA non-coding downstream 215156 10873956 ~ 10874264 (-)
G20237 NA non-coding downstream 255252 10822047 ~ 10834168 (-)
G20322 NA non-coding upstream 5923 11099554 ~ 11101587 (-)
G20341 NA non-coding upstream 17975 11111606 ~ 11182833 (-)
G20315 NA non-coding upstream 23124 11116755 ~ 11120830 (-)
G20317 NA non-coding upstream 30012 11123643 ~ 11124829 (-)
G20316 NA non-coding upstream 36522 11130153 ~ 11131056 (-)
G20136 NA other downstream 549570 10539027 ~ 10539850 (-)
CI01000001_09804494_09811219 NA other downstream 1268524 9804429 ~ 9811219 (-)
G18223 NA other downstream 3160903 7926104 ~ 7928517 (-)
G20319 NA other upstream 17206 11110837 ~ 11114747 (-)
CI01000001_12878462_12899012 NA other upstream 1779767 12878365 ~ 12899469 (-)
CI01000001_12921289_12924608 NA other upstream 1826968 12920599 ~ 12925496 (-)
G20555 NA other upstream 2248358 13341989 ~ 13348146 (-)

Expression


Co-expression Network