Item | Value |
---|---|
gene id | CI01000001_11099313_11137500 |
gene name | HUWE1 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000001 |
NCBI id | null |
chromosome length | 13537560 |
location | 11099313 ~ 11138278 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
huwe1 | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in several processes, including base-excision repair; cellular protein metabolic process; and positive regulation of protein catabolic process. Predicted to act upstream of or within DNA repair. Predicted to be active in Golgi membrane and nucleus. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability Turner type. Orthologous to human HUWE1 (HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1). |
id | name | namespace |
---|---|---|
GO:0005737 | cytoplasm | cellular_component |
id | description |
---|---|
K10592 | HUWE1, MULE, ARF-BP1; E3 ubiquitin-protein ligase HUWE1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000001_11099313_11137500.mRNA | True | 14203 | mRNA | 0.54 | 79 | 11099313 | 11138278 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000001_11019871_11028065 | MYL6, MYL6B | coding | upstream | 70789 | 11019479 ~ 11028524 (+) |
CI01000001_10989337_10992917 | BIRC5B | coding | upstream | 106335 | 10989337 ~ 10992978 (+) |
CI01000001_10968536_10981345 | NA | coding | upstream | 117526 | 10968344 ~ 10981787 (+) |
CI01000001_10856786_10861403 | C1GALT1A | coding | upstream | 237175 | 10855960 ~ 10862138 (+) |
CI01000001_10807407_10818870 | SLC26A10 | coding | upstream | 279260 | 10807320 ~ 10820053 (+) |
CI01000001_11138617_11139541 | NA | coding | downstream | 7 | 11138285 ~ 11139673 (+) |
CI01000001_11182552_11204143 | NADL1.2 | coding | downstream | 44274 | 11182552 ~ 11204499 (+) |
CI01000001_11216246_11230227 | SMC1A, SMC1A.L, SMC1AB, SMC1AL | coding | downstream | 77968 | 11216246 ~ 11230321 (+) |
CI01000001_11232168_11238289 | SRM | coding | downstream | 93890 | 11232168 ~ 11238655 (+) |
CI01000001_11246797_11247315 | CORT, SST3 | coding | downstream | 108371 | 11246649 ~ 11247541 (+) |
G19130 | NA | non-coding | upstream | 112847 | 10925528 ~ 10986466 (+) |
G19034 | NA | non-coding | upstream | 202408 | 10892437 ~ 10896905 (+) |
G19088 | NA | non-coding | upstream | 224442 | 10874670 ~ 10874871 (+) |
G19087 | NA | non-coding | upstream | 225080 | 10873982 ~ 10874233 (+) |
G19080 | NA | non-coding | upstream | 283611 | 10814390 ~ 10815702 (+) |
G19226 | NA | non-coding | downstream | 31015 | 11169293 ~ 11183770 (+) |
G19096 | NA | non-coding | downstream | 116791 | 11255069 ~ 11304024 (+) |
G19108 | NA | non-coding | downstream | 243296 | 11381574 ~ 11381987 (+) |
G19258 | NA | non-coding | downstream | 249365 | 11387643 ~ 11387959 (+) |
G19259 | NA | non-coding | downstream | 251277 | 11389555 ~ 11389858 (+) |
G19039 | NA | other | upstream | 245330 | 10850924 ~ 10853983 (+) |
CI01000001_10538498_10539667 | RPS26 | other | upstream | 559467 | 10538388 ~ 10539846 (+) |
G18937 | NA | other | upstream | 622924 | 10474984 ~ 10476389 (+) |
CI01000001_10395420_10396473 | NA | other | upstream | 702608 | 10394851 ~ 10396705 (+) |
G18872 | NA | other | upstream | 817944 | 10271146 ~ 10281369 (+) |
G19314 | NA | other | downstream | 362916 | 11501194 ~ 11558673 (+) |
G19395 | NA | other | downstream | 543044 | 11681322 ~ 11681817 (+) |
CI01000001_13514115_13517063 | NA | other | downstream | 2375126 | 13514115 ~ 13517063 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_021746 | huwe1 | coding | NC_007134.7 | CM002907.2 | 28494189 ~ 28568978 (+) |
bowfin (Amia calva) | AMCG00009768 | huwe1 | coding | CM030126.1 | CM030126.1 | 45705867 ~ 45738830 (-) |