taar10 (LOC107697082,LOC107550377,LOC107719389)


Basic Information

Item Value
gene id taar10
gene name LOC107697082,LOC107550377,LOC107719389
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21890151 ~ 21891194 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220545.1
ATGGACCTAAACAATTCAACTCAAACTAGGATTGACCGTGGACCTGCTCTCTGTTTTGAGTCGTCCAACAACTCATGTGAAAGATTTGTCTACCCATCAGAGATTCAGATTTTGCTTTATTCATTCTTCAGTGGCATTGCGCTAACCACAGTATGTGGAAACCTGCTGGTCATCCTCTCCATCATTCATTTCAAGCAGCTGCACACGCCAGCAAACTACCTAATCCTGTCTCTGGCCGTGGCCGATCTGCTCATCGGAGGTTTTGTGATGCCTCCCAGCATGCTGCGCTCTGTTGAGACGTGCTGGTACTTGGGAGACGTGTTCTATCGCTATTATGCCGTATGTCACCCGCTTCATTACCGGAATAAAATCACTCCTCCCGTTTGCCTCATTATGATTTCCCTAAGCTGGGGTCTAGCTGCGTTTGTTGGATTTGCTATGGTGTTTCTACAACTCAACATTCTGGGTGATGAGgagttttatttcaataatatagCCTGCAAAGGCGCCTGTATCATCTTTCAAACCGCAGCAGCCAGCACCATTTCCTCATTTCTTGCTTTCGGTCTTCCCGCAATAATTGCTGTCAGCATTTATCTCAAAATTCTCCTTGTTGCACGAAAACAATCAAAATCTATACAGCATTTAGTCCACGTGGGCAAAAATAACTGTGCTTCCATAAACAAAACTGAGGGGAAGGCCACAAAAACGCTTGCTATCATCATGGGGGTATTTTTTGTAAGCGTCTCACCCTTTTTCTTCTGTAATCTAGTAGACCCTTTTCTAAATTACACAGTACCACCGGCCATATTTGATGCTTTTTTGTGGATTGGATATTTTAATTCTCTGTGTAACCCTTTTGTGTATGCATTCTTTTATAGATGGTTTAGAAAAGCTCTGAGAATCATCATTTTAGCCaaaatatttcaagtaaattCTTCACAACTTGACATAATGGAAAGACGTGATTAG

Function

NR:

description
PREDICTED: trace amine-associated receptor 1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220545.1 True 972 mRNA 0.42 2 21890151 21891194

Neighbor

gene id symbol gene type direction distance location
bmf2 LOC107550420,LOC107593255,LOC107719427,LOC107685367 coding upstream 66032 21817203 ~ 21824119 (+)
rmdn3 rmdn3,LOC107593256,LOC107685363,LOC107719355,LOC107697192 coding upstream 96008 21787959 ~ 21794143 (+)
eif2b2 eif2b2,LOC107719358,LOC107685362,LOC107697194,LOC107742715 coding upstream 110906 21774884 ~ 21779245 (+)
tmed10 tmed10,LOC107697197,LOC107685358,LOC107593259,LOC107550417 coding upstream 115782 21771292 ~ 21774369 (+)
fosab LOC107697196,LOC107719360,LOC107685356,LOC107550415,LOC107742716 coding upstream 121549 21766414 ~ 21768602 (+)
taar10a taar10a,taar10b,taar10d,taar10c,LOC107719440,LOC107697108,LOC107550390,LOC107719439,LOC107697105,LOC107697107 coding downstream 5757 21896951 ~ 21897961 (+)
LOC122325159 taar10b,taar10c,taar10d,taar10a,LOC107719439,LOC107550391,LOC107697107,LOC107697105,LOC107550394 coding downstream 8578 21899772 ~ 21900828 (+)
LOC122325217 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding downstream 19207 21910401 ~ 21911411 (+)
LOC122325154 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding downstream 23449 21914643 ~ 21915653 (+)
taar1b LOC107733378,LOC107697104,LOC107550379 coding downstream 29101 21920295 ~ 21922335 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding upstream 37030 21850862 ~ 21853121 (+)
G140792 NA non-coding upstream 40016 21849762 ~ 21850135 (+)
G140788 NA non-coding upstream 43130 21846814 ~ 21847021 (+)
G140786 NA non-coding upstream 44698 21844833 ~ 21845453 (+)
G140784 NA non-coding upstream 49686 21840223 ~ 21840465 (+)
G140900 NA non-coding downstream 17780 21908974 ~ 21909333 (+)
G140905 NA non-coding downstream 42790 21933984 ~ 21978548 (+)
G140907 NA non-coding downstream 76504 21967698 ~ 21969950 (+)
G140922 NA non-coding downstream 169869 22061063 ~ 22061533 (+)
G140931 NA non-coding downstream 206717 22097911 ~ 22098292 (+)
G140785 NA other upstream 45450 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 688189 21168775 ~ 21201962 (+)
G140533 NA other upstream 787641 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1098448 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1215762 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 580567 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 615533 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 853218 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 951611 22842805 ~ 22860327 (+)
pln NA other downstream 1452521 23343715 ~ 23351655 (+)

Expression


Co-expression Network