LOC122325512 (klhl29,LOC107667613,LOC107742703,LOC107697176)


Basic Information

Item Value
gene id LOC122325512
gene name klhl29,LOC107667613,LOC107742703,LOC107697176
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22285647 ~ 22394434 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220549.1
ATGGAAGAGAGGAAAACTCGGCGGCCGGAGCAGAGGGTTGATGACGAGGCGGCGGGTCTTTCTCCCGGAGAGACGCAGACTCCGAGTCTCCTGTTGGCTCCTGGAGTGAGATGGGGCCAGACCCCCATCAACCAGTCCACCCCGTGGGAGACCGACGAGCCCCCCGCCAAGCAGCACAGAGAGAGCGACGGCGCAGGGCCCCCGTGGGTGCCTCCGGTGGTGGCGGCCAGTCAGCCCAGCCTACTGGCCCATTCGTACGGGATGCCTCAGCCACCCGTCTACAGCCAAGGAGTCTCCGTCCAGTCTCCCGTCATCGGAGTGACCCCGGCCATCCAGACCCCCGTCCCGCCGCACCATCCGCTCATGACCGCCCACTTCCAGCTCCCTCCCCTCTCCTCCCAGCCACCCGGCAGCCTGGTCCTCAACCTCCAGAACCATTCACCCTACGCCACCAGCCAGCCGCCGATCACCCCGTCGCCCCTGACGACGGCCGGCCAGGTAGTTCACCCCGCCCCTCAGAGCGTGGTGGGAAACGGTCACATGACGCACCCGCTCATGCAGCCGCCCGCTTTGCCTTCTGCCGCGCTGCCGCTAACGAACGGCCAGGCGACGACTCAGCCGGCCTCGGCCAATCAGGAAAGTCCGAACGGGCTTCAGATGCTCCGTACGGTCGGGATGGGGAAGTACGAGTTCACGGACCCGAGTCATCCGAAAGAGATGTTGAAGGAGTTGAACCAGCAgcgcagagagaaagagtttaCAGACCTGAAAATTATAGTTGAAGGCAAAGAGTTTGAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAAGGACCTGGTGAAAAGGTCGTCGAGGGAACCGGGCAGTGGAGAGAAGCTGGAGCTGAAGATGACTAACATCGGTGCAGATGTGCTGGAGCTGCTGCTGGAGTTCGTCTACACCGGCTCGCTGGTCATCCACTCGGCCAACGCCAAAACCCTGCTGGAGGCCGCCAACAAGTTTCAGTTCAACACCTTCTGCAAAGTCTGCGTGTCTTTCTTAGAAAAGCAGCTGACTGCAGCAAACTGCCTGGGGGTTCTGGCCATGGCCGAGGCCATGTGCTGCACGGAGCTCCACAACATGGCCAAGGCCTTCGCCCTGCAGAACTTCCCCGACGTGGCGGGACAAGACGAGATTCTCAGCATCTCCAAAGAAGACCTCGTTAACTACCTGTCCAATGACAGCCTGAACACCAAGGCCGAGGAGCTGGTTTATGAGACCGTCGTCAAGTGGATCAAGAAGGACCCAGTCGCAAGAGTACAGCACATATCCGAGTTGCTGGCCGTCGTGAGACTTCCGTTCATTCACCCCAGTTACCTGCTGAACGTGGTGGACAATGAGGAGCTGATTAAATCGTCGGAGGCTTGCCGAGATCTGGTCAACGAGGCCAAGCGCTACCACATGCTGCCTCACGCACGACAGGAGATGCAGACGCCCAGGACGCGGCCGAGACTCTCCGCAGGTGTAGCAGAGGTGATCGTGTTGGTGGGAGGGAGGCAGGCGATCGGCATGAACCAGCGCTCTCTGACGGCCGTCACCTGCTTCAACCCTCAGAACGGCAAATGGTACCCTCTAGCCAGCCTCCCGTTCTACGACCGCGAGTTCTTCAGCGTCATCTCCGCCGGGGACAATATTTACCTGTCAGGTGGTACGGAGTCAGGGGTGACAGTGGCAGATGTGTGGTGCTACATGTCTCTTCTGGACAACTGGAACCTGGTGTCCCGGATGACCGTCTCTCGCTGCAGGCACAACAGCTTGGTGTACGACGGGAAACTCTACACTATCGGAGGACTCGGGGTGGCTGGAAACTTGGACCATGTGGAAAGGTACGACACCATCACGAATCAATGGGAGACGGTGTCTCCGCTGCCCAAGCCCGTCCATTCGGCGGCCGCCACCGTGTGCGGCGGGAAGGTCTACGTGTTCGGCGGCGTGAATGAAGCCGGACGCTCGGCGGGCGTTTTACAATCTTACGTCCCCCAGACCAACACCTGGAGCTTCATAGAGTCCCCCATGATCGATAACAAGTACGCTCCCGCTGTGAGCCTCAATGGTTTTATCTTCATCCTGGGAGGAGCCTATGCCCGAGCCACCACTATCTACGACCCAGACAAGGGCAACATCAAAGCCGGCCCCAACATGAATCACTCCAGGCAGTTCTGCAGCGCGGCGATCCTGGACGGCAAGATCTATGCAACGGGAGGGATCGTGAGCAGCGAGGGACCAGCGCTGGGCAACATGGAGACCTTCGACCCTTGCACAAACACGTGGACGCTTTTGCAGAATCTGCCGTGTCCGCTTTTCAGACACGGATGCGTGGTTATAAAGAAGTATATTCAGAGCGGCTGACGACGAGCTAGACTCTGGACTTCTCTAATGTCACGAACTGGCCTAAACCAGCCCATCGAGCTCCAACCAGCCAACCTGGGTGGAACGCGGTCGGACCGTCGCGGACGAGATTTAGAAAGAGATCCGTAGCGTAGCTCCCCCTCAGGTGTCGTGCCATTTGAACGGTATTCTAGGTCAgccaaatgcaattttttttttttaactcccaATGTTTGAGTTGTACTTCTCCCATCATGTTTCTTTGATAAGGTTTCGGtcaaatcttgtttttttccactggTAGTCATTTCATGAGATGATATGGGATTGTGTGTCGTATATAAAGATCAGTTGCATCATGAGGGGACTTCTGTAAGAAGCCAAAGGACGTCGATGCTAGTCATGTTGCCCTCCAGCGAGGGTCAGCGCTGCAGAGAGCCGGGATTGAATGAAGGCCCTCTTGGAACTCCAAAGCACAAAATACCAGAACCTGTGATGCCCAGAggagtttcatttcattttgttctgTGTAAATCATTCCACCTTTCTTTGTGGGTTTTATCCTTGCGTTTTATTCCAATCCACGAGCCTGCAGCCATGGCAGAATACGGATGGAGCAAGATGGATGGAGAAACTTTGTATTATAGGGAagatatgtatattttaaaaaccaatgaaaattgtgtataaatgtttttagaaaagaaaagaaaaaaaaaaaaaaatcaatggatTGGACAATGTCTGTAAATCTGTACCCTACTGGAACAATTTACGCTATTAATGCTGAAATACATATCCAGAATTCTAAAGAAACAAA

Function

symbol description
klhl29 Orthologous to human KLHL29 (kelch like family member 29).

NR:

description
PREDICTED: kelch-like protein 29 isoform X1

GO: NA

KEGG:

id description
K10465 KLHL29, KBTBD9; kelch-like protein 29

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220549.1 True 3196 mRNA 0.55 12 22285647 22394434

Neighbor

gene id symbol gene type direction distance location
trib2 trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179 coding upstream 126719 22150436 ~ 22158928 (+)
napbb si:rp71-81o21.2,napb,LOC107756672,LOC107667620,LOC107742707,LOC108411873,LOC107593246,LOC103023605,LOC106571745,LOC106610947,LOC100691502 coding upstream 193865 22085016 ~ 22091782 (+)
gpcpd1 gpcpd1,LOC107593247,LOC107742708,LOC107756671,LOC107697181 coding upstream 203030 22067984 ~ 22082617 (+)
trmt6 trmt6,LOC107667616,LOC107697184,LOC107593280 coding upstream 228433 22046439 ~ 22057214 (+)
fermt1 fermt1,LOC107697185,LOC106571740 coding upstream 240101 22032996 ~ 22045546 (+)
mfsd2b si:dkeyp-115a10.3,mfsd2b,LOC107750078,LOC107697177,LOC107603080,LOC107667608 coding downstream 83627 22478061 ~ 22498608 (+)
mmut mut,LOC107726757,LOC107697172,LOC107726528,LOC107667609 coding downstream 123731 22518165 ~ 22537861 (+)
runx2b runx2b,runx2,LOC107678859,LOC107726745,LOC107697170,LOC107603075 coding downstream 227954 22622388 ~ 22662318 (+)
mark3b mark3b,LOC107697167,LOC107743287,LOC107678848,LOC108412004,LOC107726756 coding downstream 292138 22686572 ~ 22738127 (+)
laptm4a laptm4a,LOC107678852,LOC107726758,LOC107603102,LOC107743288 coding downstream 345199 22739633 ~ 22744277 (+)
LOC122324401 NA non-coding upstream 170780 22098405 ~ 22114867 (+)
G140933 NA non-coding upstream 184186 22101238 ~ 22101461 (+)
G140931 NA non-coding upstream 187355 22097911 ~ 22098292 (+)
G140922 NA non-coding upstream 224114 22061063 ~ 22061533 (+)
G140905 NA non-coding upstream 307099 21933984 ~ 21978548 (+)
G141081 NA non-coding downstream 146684 22541118 ~ 22541327 (+)
G141084 NA non-coding downstream 147702 22542136 ~ 22542532 (+)
G141091 NA non-coding downstream 162795 22557229 ~ 22557502 (+)
G141121 NA non-coding downstream 526259 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 672153 23066587 ~ 23073665 (+)
G140785 NA other upstream 440946 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 1083685 21168775 ~ 21201962 (+)
G140533 NA other upstream 1183137 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1493944 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1611258 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 77327 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 112293 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 349978 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 448371 22842805 ~ 22860327 (+)
pln NA other downstream 949281 23343715 ~ 23351655 (+)

Expression


Co-expression Network