CI01000001_11138617_11139541


Basic Information

Item Value
gene id CI01000001_11138617_11139541
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11138285 ~ 11139673 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11138617_11139541.mRNA
GCATAAAATGAGCCCACTGTGTCCTCTAGAGTTGTTTCAATGTATGCCTTACACATTTGCACTAACAGGAGCAAATATCATTTATATGTTAAGAAATTTACTGATGGAGGTCCATGAAAACTAACTTGACACATGCTGTGGGGTCCAAGTATTAAAAGCTCTATTCTTCATCCTGAGTTATGTATGAGGAATTCTGTCCAGTTATTGATCACCTGCATGAATCTCACATTTATTGCTATGGGATTTTCTTTACCGGCATTTTAGGACAGGCTGTTTAGCCTTTGTTCTTGCCCTCTTCCACTCTTTTTGCATGGGAGCTGGTGTGAAGTGTAATGAGTGTCTCAGACCATCTGGAGCTTCCAGAAATGTCCATGCTGGGCACCCGTGCTGTTAGGATTCAGTTCATCACGCCTGCTTTCTCCTCCTCACCCCGGATGGCAGGAGTCCACTTGTCTAGACCGACATCTCTCCACATAAAGTGCCCGATCAAAGGCTGGCCAGCAGGGGGAGTGCGGTGATCTTTTAGTTATTAAATTTGCAAAAAAAAAATTAATGTAAATATTAGTCCATTATGGTGACCTGAGTGCATTAGGTTTGTTTAAACTGCCTTTTCCGCATGCAAGTGCCTTGGTTTTTGTTATACCTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11138617_11139541.mRNA True 650 mRNA 0.42 2 11138285 11139673

Neighbor

gene id symbol gene type direction distance location
CI01000001_11099313_11137500 HUWE1 coding upstream 7 11099313 ~ 11138278 (+)
CI01000001_11019871_11028065 MYL6, MYL6B coding upstream 109761 11019479 ~ 11028524 (+)
CI01000001_10989337_10992917 BIRC5B coding upstream 145307 10989337 ~ 10992978 (+)
CI01000001_10968536_10981345 NA coding upstream 156498 10968344 ~ 10981787 (+)
CI01000001_10856786_10861403 C1GALT1A coding upstream 276147 10855960 ~ 10862138 (+)
CI01000001_11182552_11204143 NADL1.2 coding downstream 42879 11182552 ~ 11204499 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding downstream 76573 11216246 ~ 11230321 (+)
CI01000001_11232168_11238289 SRM coding downstream 92495 11232168 ~ 11238655 (+)
CI01000001_11246797_11247315 CORT, SST3 coding downstream 106976 11246649 ~ 11247541 (+)
CI01000001_11265638_11283027 MASP2 coding downstream 125965 11265638 ~ 11283236 (+)
G19121 NA non-coding upstream 12126 11070904 ~ 11126159 (+)
G19130 NA non-coding upstream 151819 10925528 ~ 10986466 (+)
G19034 NA non-coding upstream 241380 10892437 ~ 10896905 (+)
G19088 NA non-coding upstream 263414 10874670 ~ 10874871 (+)
G19087 NA non-coding upstream 264052 10873982 ~ 10874233 (+)
G19226 NA non-coding downstream 29620 11169293 ~ 11183770 (+)
G19096 NA non-coding downstream 115396 11255069 ~ 11304024 (+)
G19108 NA non-coding downstream 241901 11381574 ~ 11381987 (+)
G19258 NA non-coding downstream 247970 11387643 ~ 11387959 (+)
G19259 NA non-coding downstream 249882 11389555 ~ 11389858 (+)
G19039 NA other upstream 284302 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 598439 10538388 ~ 10539846 (+)
G18937 NA other upstream 661896 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 741580 10394851 ~ 10396705 (+)
G18872 NA other upstream 856916 10271146 ~ 10281369 (+)
G19314 NA other downstream 361521 11501194 ~ 11558673 (+)
G19395 NA other downstream 541649 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2373731 13514115 ~ 13517063 (+)

Expression


Co-expression Network