rock2b (LOC107555625,LOC107698402,LOC107696174,LOC107726463,LOC107726633)


Basic Information

Item Value
gene id rock2b
gene name LOC107555625,LOC107698402,LOC107696174,LOC107726463,LOC107726633
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17455737 ~ 17481534 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220564.1
GATCCGAAGAATTCCTCTGGCCCAGGGGAGGGACGCACAAAGAAACACGCCGCGTGCATTCACTTGCATGTACTCGAACCCCTCTGCTTCATTTGTCCAAAAATAACAGAGGAAGAAcgagagtgtttttttttaacacaggcTGGGTTTTCCCCTGTAATTTTTGAACCGGAGCGGGAGAGACGCTCGGCTTCCTGAACGCGTGGGTCCGTCTAACCTTTGATTTTACGCCGAACGCCGCTGTCATTTACGCAAGAGGACGAGACGCAAAACCACGGTGTCCCGGTCATTTGCGTCGCGTGTAAGGTCTTCGGCCTGAGCGTTCATTCATACAGAGCCGGCGAGCTTCGAGAGGCGTCGCGTTCAGTTACGACAGGTAGTGGCAAGTTTGATTCGGACGTTTGAAGTCTCTCAATCGCGGCTGTCTAGCTGATGTCTACCTGGACCTTCACGACACCGAGCCGCCGCAATGTCGACCGGAGCAGGAAAGAGACTAGAGAAGCGGGTGAGAGTACTGGAGTCGCTCATCAAGGACCAACGATCGCCGCTGAATTTGGAGAGTTTGCTGGATTCAGTAACTGCTCTGGCCCTTGATCTGAATCATCCCGCGCtgagaaagaacaaaaacatagaTTCTTTCTTAAACAGATATGAAAAGGCTGTGTGTCGCCTCAGGGAACTACAGGTGAAGCTAGATGATTTTGACAGAGTCAAGCTGATTGGTCGTGGAGCGTTTGGCGCAGTGCAGctgGTACGACACAAAGTATCCCAGCAAGTGTATGCCATGAAGCAGCTCAGCAAATTTGAGATGGTCAAGCGCTCTGACTCCGCCTTCTTCTGGGAGGAGCGTGACATCATGGCATTCTCCAAGAGTCCTTGGATAGTTCAGCTGTGCTGTGCCTTCCAAGATGAGAAGTACCTTTATTTGGTGATGGAGTTCATGCCCGGTGGAGACCTGGTGACTCTGACCAGCAACTATGACATCCCAGAAGAGTGGGCTCGATTCTACACAGCAGAAGTTGTGCTGGCACTGAACGCCATCCATTCTCTAGGCTTCATTCACAGGGACATCAAACCAGATAACATGCTGCTCGACCGCAACGGACACCTGAAACTCGCTGACTTTGGAACATGCATGAAGATGGACTCGTCTGGTATGGTCCGCTGTGACACTGCTGTCGGGACTCCTGATTACATTTCCCCAGAGGTTTTGATGTCTCAAGGAGGAACGGGTTACTATGGCCGGGAGTGTGACTGGTGGTCTGttggagtttttatttttgagctgCTAGTGGGTGACACACCGTTTTATGCTGAGTCCCTGGTGGGCACCTACGGGAAGATCATGGATCATAAAAACAGCTTAACTTTCCCAGATGATATCGAAATGTCAAAGGAGGCCAAAGACCTCATTTGTGCTTTTCTGTCTGATAGGGAGGTGAGGCTTGGACGGACCGGAGtggatgaaataaaatgtcacccCTTCTTCAAGAACGATCAGTGGACCTTCGACACCATACGAGACAccATGGCTCCAGTGGTGCCAGAGCTGAGTAGCGATATTGACACCAGTAACTTTGATGATGATATAAAGGATGATCCGTTAGGAACCGAGACCTTTGCCCCTCCCCGTGCCTTCACAGGAAATCAGCTACCATTTGTGGGCTTCACATATTTCAGGGAGGACCAaTTGCTAAACCAGAACAATAAGTGTTCAGAAGAGGACTCTAATGCTGATAGCGTCAATGAGGATCATAATTTAAACCAGGCAGAgTCCAGTGACCTGcaaaaaaggctgaaaaagtTGGAAGACAAAGTGAAACATGAAATGCTAGCAAAGGAGGAACTGGAAAATAAATGCAGAACAGCAAATCAGCGGCTAGAGAAGCTGTCCAAAGAGCTTGAAGAAGAAGTGAATGCGAGGCAGGTGGTGGAAGACTCTCTGAGGGAactggagaaagagaaagcttTACTGGCGCACCAGCGTTCTGCGAGCATAAGAAAGGCTGGCctagaaacagacagaaagcgTCAGCTTGAGAATGAGGtgaGCAGCCTGAAAGAGCAGCTAGCCGAACTGAAGAAGAAGACCCAGAACTCTCATATCTCTGCTGAGAAGAACATTCAGCTGGAAAAACAGTTGGAGGAGCTGAATGCTAAGTACCAGGCGGAGGTGGAGGAGTCTGAGTGGCTGAAGAAGGCCCAGGGCGAGGCATTGAGACAGTCCCAGCAGCTGGAAGTCTCTCTCAGGGAGCTTCAGGAGCGTCTGGCCCAGCTGGAGAGCAGCCGGCTGGGTCTGGAACAGGAGAGACTGAGCCTGCAAACCTCACTGGAGCTGGAGAAGCGAGAGAGAAGTCTCAGCTCAGAGACCATCAATGACCTACAAGGCCGTGTCTCTGGACTGGAAGGCGAGTTAAAGCACATAAAGAGTTCTCTATCAAAGGCTGAAGCAGAGAAAAGACAGTTGCAGGAGGATCTTACTGCCCTggaaaagGAGAAGAGCAAGCAGGAGATTGATCTTTCTTTTAAACTCAAAGCCATTCAGCAGAGTCTAGAGCAGGAGGAGGCAGCGCATAAAGCCACTAAATCCAGATTGGCtgacaacaacaaaatcaacCAATCCATTGAGGAGgccaagtctgaggccttgaAAGATATGGAACATAAGCTGCTGGAAGAACGATCTGCGAAGCAACAGTTGGAAAATAGACTGATGCAGCTGGAGAAAGAAAACTCAGTGTTAGACTGTGACTACAAGCAAGCCAAACACGAGCTTCAGGAGCTCCGCTCTCTCAAAGAAAAACTCACCGAGGAGGTGGAGGTGCTGAGTGTACGTGTGCAGCAGGAGACTCAGAGGAAGACTCTGTTTCAGGCAGATCTCAATGTACAGAGGCAGGAGGTCAGCACCCTGCGCTCCTCAGAGAAACAACTCAAACAAGAGCTCAACCATCTGCTAGAGCTCAAACACAACCTGGAGAAACAAAATCAAGAACTACGCAGGGAGAGAGAAGATGCTGACAAACAGCTGAAAGAGCTGAAGGACCAGTTGGAGTCGGAGCAGTACTTCACAAAACTGTATAAGACTCAGATTCGAGAGCTGAAGGAGGACAGTGATGAAAAGGCCAAACTCTACAAAGATGCTCAGCAGAGAATAGAGGACCTGCAGGAAGAGagGGACTCATTAGCAACACAGCTAGAGGCGAGCCTGACAAAAGCGGACTCTGAAGAGTTGGCGCGCATCATCGCTGAGGAGCAGTACTCAGACCTGGAGAAAGAAAAGATCATGAAGGAGCTGGAGATCAAAGACATGATCGTCAGACACCGGCAGGAACTCAGCGAAAAGGACAATACCATCAGCTCGCTGGAGGAATCGAACCGCACGCTGACTGTGGATGTTGGAAACCTGGCTAATGAGAAAGAAGAGCTCAACAATAAGCTCAAACATATACATCATAAGCTGGACAAGgccagagaagaagaaaaacagacaaaatctTTGGTCCTGTCCTTCGAGAAGCAAATACAGTCTGAGCGAACCCTCAagattcagGCGGTGAACAAGCTGGCGGAGGTTATGAAGAAGAATGATGTCAGAACCCCACAACTCAACAACACAGACGTCCGcaggaaggagaaggagaacAGACAGCTCCAGTCGCAGCTCCGCACTGAGAAAGATAAACTCAACAACGCTATCATCAAATACCAGAGAGAAATCAATGAAATGCAGgctACGTTAGCAGAGGAGTCTCAGGTGCGACTGGAGATGCAGATGGCCCTGGACAGTAAAGACAGTGATATTGAGCGTCTGCGCTGTCAGATCACTTCTCTGAGCATCCATTCTCTGGACACCACCAGCATCAGCAGCACCGGCAACGACCTGGAAAGTGATGACGCTTATCCAGTGCgcatcacacactcacacacctcgGAGTCTATGTCCTTCACATACCAGCGAAGCTCCAAGTCAGTGTGTATTGATACCCGGCTGCCGGATCGTACCTCGTTCCCCTCCGActcagaggaagaggaggacgagGAAGTCGAGTGGGGGCAAAGGCCCGCCATCACATATGAGAAGCCTAATGACCAAGAGTCTGCAGATTCTAGTCTTGAAGGATGGCTCTCAATGCCTACCAAAAATACCAAACGGTTTGGATGGGAAAAGAAGTATGTGGTGGTAAGCAGCAAGAAGATCCTGTTTTATGACTCGGAGCAAGACCGAGAGCAATCCAGCCCCTTTATGATTCTGGACATAGACAAACTCTTCCATGTGAGACCTGTCACTCAGACAGACGTGTACCGTGCAGATCCCAGAGAAATCCCACGCATCTTCCAGATATTATATGCTAATGAGGGAGAGAGCAAGAAAGAGGAGCTTGCTGTGGAACCCTTATCAGCAGCTGAAAGGTCGTCGTTTATCCCACACAAAGGTCATGAGTTCGTGCTCACGCTTTACCACTTCCCCTCAAGCTGTGAAGCATGTCCAAGGCCTCTGTGGCACGTCTTTAAGCCCCCACCAGCCTTGGAGTGCAGACGCTGCCGAATCAAATGCCATAAAGACCACATAGATCACAAGGAAGAGGTCCTAGCTCCTTGCAGAGTGAACTATGACATGTCCACAGCAAAGGAGCTACTGCTGCTGGCCAACTCCACAGAAGAGCAGCAGAAATGGGTTAGCCGCTTACTCAAGAAGGTTCCACGTAAACCTATAGCCCACTCCTCAAGCATAGCCATAGCTTCTCCTTCCTCCGAGACATCGTCAGCTGGCCTGTCTCCTCAACCCTCTCCTCACCTGTCAGCCCATTCATCTCCCAGACCTTCacacagagcagccatcaaaaTGCATTCCACCCGACAGCAGCCCTCACCCAAGACCAGATTGCTTGAGTTGGGCCTGAAGGACTGGGGTTGGTCTCTTGATGTTGAAATGGATGATGACGATGTATTAGACTTCTGAGGACTTGAGTTTGTGGGctaACCTTGGTGAAGGTTGGATAGGCGATAATGCATCTGGGAACTATGAAAGCGGAGAATGTCATAGTGTTCATTTTGGCAAATGGCAGGACTTCCAAGTGCCAAACTCCACAAGTATAAATGACTGGGGAAGGAGGAGGGAGGTCTAATCTTTAATACAGAACAAGCCATAAATCACCTAAAAAGGGGGTAATTTAAAAGTGAAGCCATTTTATGAGTGTTTTATGTCTTTGTAGACTACacaatttttcaaaatcattttcaagTTAAAGAACCTTAAACTTTCTGGTCTTCCTGCAAAGTTGTCAATAAGTGTGAGTGCTtgcctgagtgtgtgtttgaaaccGAATATATACCTTGGCTCTGCAATTACATGATCATCTGAATTTCTATACTCGAGtattatatctatttttgtTAGGAAAAACAGATCAATATTTAGTGacagattatatttttatcatgcaTTATCAAAGAACACTTTTGAAAACTGCTTTTCAAAGAGTTGTTTGCCAGAACTGTCTGctcaaaatatatgcattattaaagaCTGATATTACATGATGCAATCCGTagcacattttagcattttattaattgctgtgacaaaaaaaaaatacacaatctGTATACATAGTGGAACATGAAGGCCTCTGGTccaaacattttctgttttatcattttgccATGTTGCCACTGACAAAGCATTGAAAACATTGTGAAAttcttaataaagaaaaaagctttatttgatGAA

Function

NR:

description
PREDICTED: rho-associated protein kinase 2-like isoform X1

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0070121 Kupffer's vesicle development biological_process
GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry biological_process
GO:0005856 cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220564.1 True 5734 mRNA 0.48 35 17455737 17481534

Neighbor

gene id symbol gene type direction distance location
LOC122325537 LOC107698338,LOC107555613,LOC107726610 coding downstream 300 17453042 ~ 17455437 (-)
paplnb LOC107698340,LOC107555612 coding downstream 15726 17428506 ~ 17440011 (-)
smek1 smek1,ppp4r3a,LOC107726626,LOC107555622,LOC107696138,LOC107698404,LOC107601285,LOC107726461 coding downstream 30926 17414467 ~ 17424811 (-)
nbas nbas,LOC107602494,LOC108439588 coding downstream 168845 17152343 ~ 17286892 (-)
nr2e1 nr2e1,LOC107602776,LOC107726424,LOC107726614,LOC107601200 coding downstream 463934 16984344 ~ 16991803 (-)
fam102bb fam102bb,fam102b,LOC107555630,LOC107698400,LOC107696175,LOC107601256 coding upstream 17945 17499479 ~ 17515480 (-)
atf6 atf6,LOC107555632,LOC107698395,LOC107710557,LOC107726471,LOC107601246,LOC107696152 coding upstream 42084 17523618 ~ 17554947 (-)
LOC122324570 LOC107579823 coding upstream 104850 17586384 ~ 17595986 (-)
LOC122324572 NA coding upstream 115859 17597393 ~ 17602425 (-)
LOC122324568 NA coding upstream 122124 17603658 ~ 17608945 (-)
LOC122324490 NA non-coding downstream 46242 17396342 ~ 17409495 (-)
G139323 NA non-coding downstream 59739 17394864 ~ 17395998 (-)
G139317 NA non-coding downstream 119417 17336007 ~ 17336320 (-)
G139302 NA non-coding downstream 329827 17125437 ~ 17125910 (-)
G139301 NA non-coding downstream 330489 17124823 ~ 17125248 (-)
LOC122324574 NA non-coding upstream 74321 17555855 ~ 17559470 (-)
G139386 NA non-coding upstream 133614 17615148 ~ 17615699 (-)
G139387 NA non-coding upstream 134259 17615793 ~ 17616508 (-)
G139565 NA non-coding upstream 307664 17789198 ~ 17794072 (-)
G139567 ivns1abpa,LOC107696153,LOC107726450,LOC107732388,LOC107553504,LOC107683098,LOC107599089 non-coding upstream 313950 17795484 ~ 17799866 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 27614 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 993521 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 1088938 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1351010 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 1462092 15990149 ~ 15993645 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 319868 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 861929 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 924493 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 1773200 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 1779932 19261466 ~ 19262952 (-)

Expression


Co-expression Network