bmf2 (LOC107550420,LOC107593255,LOC107719427,LOC107685367)


Basic Information

Item Value
gene id bmf2
gene name LOC107550420,LOC107593255,LOC107719427,LOC107685367
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21817203 ~ 21824119 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220582.1
CAATACCGACATCTCGAGCGCACGGCGCAGAATGAAAGCGGAGCGAGTTCGTGTTAGTAAATACAAGCAGAGTGAAGACGGAATAAAAAGAGCGCTGACACAAAAAGCGGAATAAAAGCAGCACTGACACACACATTCAAGCACTGGCGGGCGGTTTTGCTGACTCCGCCGATGGATGATGAGGAGGACGAACAGCTTCCTCGCTGCTGTGAAATACCGCTAAGAAACAAGAGCTCAGAGAACAGAGACGGCCCACAAGGAGAGGTGGGACAAACGGCTAACAGACACGGACGCTTTGAAGACAGATCGACGCAGACTGCCAGCTCTGTGCTGAATTCAGTGAGAGACGGAGATATGGCACCATTCCAGGGTTTGGAGAGAGATGCATCCTCTCCCTGCAGAGCTGTGGATGCCAGGACTGCATTTGGGGCTAACTGTGGAACTGGGGGCCTTGCGTCACTTACTATGGGCCCCGGGGCCCCTGAAGGGCCAAGAGCACTTTTTCATGGAAATGCTGGATTTCGTTCCCACTTCCCCGCACTATTTGAACCCGTCCTGGATggcacacaaaacacagacgAGGCGGAAGGGAGACCAGAAGAAAAGGAAGATGAACGCGATGCGGGGATTAGCGTGGAGGTTCAGATCGGACGTAAACTGCGTGAAATGGGGGATCAGTTTCAGCAGGAGCATCTTCAGCTGTTCACTCAAAGGGGCCAGATGGGTTTGTTCCAGCTTGTGACGGCACTCTACAACTTCCTTTTTCCTCAAGAAAGACCCCGAAATGCAAGAGCCCAGAGATGAGAGGCCACGGCGCACCTCTTCAGGACCCAAATGAGTTTTACGCAGCACTGTAAGATGCGCAGATCTGGATTTACATGGCTCAAAAAGAAGGTTGCCGCTGGTCGGAGACTTTCCTCCTTTTTTTGAAGAAGCCATTCTCTAAATGGAGCGTTGGAGGAAATTTTCTGCAGGTTGCATATCAGTAGGAAGATTATTCTGCCTTATGTCTCCCCAACACGTTCACATATTGAGCGGATCTCAGCGCCTTAAAACcctcagaaaaagaaagaactgcTTCAATAGGCAACAAGCTGTGAAAATACTCAAGGTCAACAGCATTCGAGTATTTGTGCTGACTTCAATACACCTTCTGAACTCCGACGCATCCCAGAACAGTATATTCATCTTTAACTGCTGGTGTATCACAGCTTATGCTTGATTCACTGCTgttaacagtgttattttaacagAGATGAAGGACAGAATGGATCCGATGAGATGCGATCCAGAGGCCAGTAACATCATAGAGGACCGACACAGAACTGAAAAAACTTTgttcaaatgcagaaaaaacaaCTTGAACATCAGGTTTTAATACCTGTATAACAATCATGAGCCATTTCTCAGAACACGGAGACAAATATgaattttgtgattttaaaagggtcattttttcttattaaggGAGAATGCACCATACAATTATTTACAACAATTTTACCCTTCTGGAATATTAGTTTGCCTTAATGAATTCTATTGTTCTGCTGTCATATATCACAGGCTGACATGATTTCTCTCAGGCACTGAAGTATTACTTGAGATATCAGTGTTTATAGCATCTCTTCAGTAATTGGTGACATTCAAAATGTGCTCAAAGAGCATACACCAAatcatattttacagtacaactCAAGCGATAAATGCAATCAGTAATATCTAATCCAATCTACAAGTTACCatataagaatatattaaaGTTCTAGCAAGAGATGtgttggtatatatatattatgtcaaTCAAGTTATTGAAAAGCGTTTTTTACTACTGTAAATGTCTTAAGAGGGAAAGTGTCTTCTGGATAGCGTAAATATGCTTTAATTAAAGGGTCAGTTAGCACAGAAATTAATATTACGTAATCTCTTACaaaccctcatgtcattccgaGCATTCAtgtgttattttctttcttccatgttaaaaaaaaagtttaggttTTCTTTAGGGTAGCGCCATGTTTAATTTTGGCGGGAACGAAAACGAATCGTTGAGGGACAAACGGTGCAAAACTGCATTGAGTTAGGACATTTTACACAGTAGGCCTACATGCCATCCCTCAGACTCGTTTTCGGCTGCATAAAATTATACATGGCCAGGTTTGTAAACGAAGACAGAAttcgcaatttttttttttttacgtgaactgtccctttaagaatgaGGACGTTAATGAACTCAGATGTAGATTTCTATTGGAGCGTCCAGTGAGGTCACGTCACGTGACTGGCTAATGACCTGTCGCCGATATGAATATTTAAGAGTTTGTATATGATATGCGACAAAGCGGGGtaatttattttccacatatatatttgtaaactCATATTGTAAagtgaaattaatataaatacgaGATTAACGATTTAACTTAATTTATCGGAAATAGATATCGTTCCATGCTTTTCTGTGGTACAATCTACTGAGGTGCCTGTACTTTTCGCGGTTTACAATTTTACATGGTTTGCTTGTGCATTATCGATAGTTTAATACACATAATATCGTCGGTATAGTGTTGTTAGAGACCATGAAGACGGCGTGAGTATAACGCAAGGCTGTCCGAGTCCGCAAAATCCACATCATTCCTTGGCAATTGTTACGATTTCAGACCATTTCCTCACAGACTTTCCACGGAGGTGATGTTCCAGCGCTGTGATGCGTTCTTGTCCTGTTGTTCTTCTGACAGGTGTGCCTCAAATGCTTGTGTGTTGGTTAACGATGACACTCGCAGACAATCAAACAGCTGAAGGTGCCTTAGAACAGCAGGCCAACGATGATGAAGGCTTGGGCGTGGACTTATAGATCACACACGAACGAATAATACCTCCGGCTAAACAACAGGGAGCTCAAAACAGACTGTCAGAGAGAACCTGAAGTGATGATTTGCAGGAACaggccgctgctgctgctgcctcaTTCATCTGAAATGCCCTTTCAAATGCACTCGTCTCAGAAAGTCGTCAAAggagtaaaaatgtttttactttgtttcGAATGTGTACGGGACGTTACTGctggttctttttttaattttgctacTTAAAATTACTATACGgtttgataaatatattaaatgctgttataaaattgtgaaataagaTGTCTTTTTTTACGTATATCATAAATGCTGTCATATAAATGCTGACACTTTTTCTGCAATGTTCAccgcattaaaatatttatggatACTCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107550420

GO:

id name namespace
GO:0043065 positive regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220582.1 True 3250 mRNA 0.42 4 21817203 21824119

Neighbor

gene id symbol gene type direction distance location
rmdn3 rmdn3,LOC107593256,LOC107685363,LOC107719355,LOC107697192 coding upstream 23060 21787959 ~ 21794143 (+)
eif2b2 eif2b2,LOC107719358,LOC107685362,LOC107697194,LOC107742715 coding upstream 37958 21774884 ~ 21779245 (+)
tmed10 tmed10,LOC107697197,LOC107685358,LOC107593259,LOC107550417 coding upstream 42834 21771292 ~ 21774369 (+)
fosab LOC107697196,LOC107719360,LOC107685356,LOC107550415,LOC107742716 coding upstream 48601 21766414 ~ 21768602 (+)
esrrgb esrrgb,LOC107685376,LOC107697200,LOC107550385,LOC107719365,LOC107708321 coding upstream 136283 21668066 ~ 21680920 (+)
taar10 LOC107697082,LOC107550377,LOC107719389 coding downstream 66032 21890151 ~ 21891194 (+)
taar10a taar10a,taar10b,taar10d,taar10c,LOC107719440,LOC107697108,LOC107550390,LOC107719439,LOC107697105,LOC107697107 coding downstream 72832 21896951 ~ 21897961 (+)
LOC122325159 taar10b,taar10c,taar10d,taar10a,LOC107719439,LOC107550391,LOC107697107,LOC107697105,LOC107550394 coding downstream 75653 21899772 ~ 21900828 (+)
LOC122325217 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding downstream 86282 21910401 ~ 21911411 (+)
LOC122325154 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding downstream 90524 21914643 ~ 21915653 (+)
LOC122325564 NA non-coding upstream 78456 21735966 ~ 21738747 (+)
G140747 NA non-coding upstream 81531 21732575 ~ 21735672 (+)
G140698 NA non-coding upstream 117945 21698421 ~ 21699258 (+)
G140721 NA non-coding upstream 180009 21636509 ~ 21637194 (+)
LOC122325460 NA non-coding upstream 264089 21551685 ~ 21553114 (+)
G140784 NA non-coding downstream 16104 21840223 ~ 21840465 (+)
G140786 NA non-coding downstream 20714 21844833 ~ 21845453 (+)
G140788 NA non-coding downstream 22695 21846814 ~ 21847021 (+)
G140792 NA non-coding downstream 25643 21849762 ~ 21850135 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding downstream 26743 21850862 ~ 21853121 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 615241 21168775 ~ 21201962 (+)
G140533 NA other upstream 714693 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1025500 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1142814 20673461 ~ 20674389 (+)
trdn LOC107602167,LOC107727612,LOC107675223 other upstream 1225044 20554113 ~ 20592159 (+)
G140785 NA other downstream 20027 21844146 ~ 21844701 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 647642 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 682608 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 920293 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 1018686 22842805 ~ 22860327 (+)

Expression


Co-expression Network