CI01000001_11265638_11283027 (MASP2)


Basic Information

Item Value
gene id CI01000001_11265638_11283027
gene name MASP2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11265638 ~ 11283236 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11265638_11283027.mRNA
GGAAAATCTTTTTCCCTAAAACATGCAGGTACCCAGATGCCTTCAGAGGTGTCCAGTCAGAGTACTCAAGGGAGTCTTATAATTCAAATGTATCTTTGGCTTTCGTCACCCTGCTTCCATTAGCTTTTGGCTCAGAGCTGAAAGGACTATTTGGGAGCTTCACATCACCAAACTTCCCAAACGTCTATCCTAACAACCAACGTATGGTGTGGAATATCACAGGACCAAAAGGACACAGATTACGTCTCTACTTCACTTATTTTAGCCTGGAGCCTTCTCATCGCTGCGAATATGACTATGTTCAGGTGTTCTCAGAAGGGAATGAGACGGTCCGGTTCTGTGGCGAGGCAGAGAAAAATTATGGTGATGCGCCCAAAAACACTGTCATCTATTCTGCCAGCAACACCATGTCAGTGCTCTTCAGATCAGATTACTCCAATGAGGACCGTTTCACAGGCTTCCAGGCATTTTATTCTGCTGAAGACATTGATGAGTGCCTGAGCACTGTGGATGGAGAGCCTGTGTGTGACCATAATTGCCATAATTATGTGGGGGGCTTTTACTGCACTTGCAGATTGGGATACCAACTTCACGCTGATAAAAGACACTGCCCTGCTGAGTGTAGTGGGCAGGTGTTTCAGCAGAGGTCAGGCGAACTGAGCAGTCCAGAGTACCCAGGTGTTTACCCCAAGATGAGCCAGTGTGATTACACTATCAGTTTGATGGAAGGCTTCCAAGTGACCCTGGACTTCCAGAACCTGTTTGATGTGGAGACTCATCCTGAAATCCACTGCCCTTATGACATCCTCAAGATCGCTGCAGGTGGAAGGGAGTACGGCCCATTTTGTGGCAGGACCCCACCAAGAAAAATAGAGACAGGAACTCACAAAGTGCATGTGACCTTCCGTTCAGATGGTTCTGGGAAAAACAAAGGCTGGAAGATCAAGTATACCAGCACAGCCCAGCCATGCCCAAACCCTGTGACTCCTCAACATGGACGTATCCAGCCGCAGCAGTCTCAGTACATCATGACAGACACTTTCAATGTCACATGTGATCTGGGCTATGAATTAATTCTGGGGGAGGAAGCTTTGCCCTTTTATCAAGCCACGTGCCTGAAGGGTGGATTTTGGAATGGACCGCTGCCTAACTGCATCATTGTTAATTGTGGAGATCCTGTAGAAGTGCATAATGCAAGTGTGAAATTCACCACAACCACATATAAATCTGTGATCAAGTATTCCTGTGATGAATTCTACACAATGGAGGCTGGAACAAATGTTTGTGGACAGCCTGAGAAAAAACTATCCAAGGTGATTGGCGGGGAGAATGCAGAAAAGAACGAGATTCCCTGGCAGGTCATGATACGAATGGGCACCAGGTTCATCGGTGGCGCTTCTCTCGTGTCGGACAACTGGGTCCTCACTGCTGCTCATGTCCTGAGAAGCTATTCAGACACTACCGAGCTGCAGCTGAAGATGGGCGTAGTCAAACAGCATGACAAAGAGGCGGTAGTTGGCGTTCCACAGAAAATCTTTGTTCACCCTCAGTACCATCATGATAACATTAACTTCAACCATGACATTGCCCTGATTAAACTGGAGTATAAGGTACCTGTCAGTAAAGCCGTCATGCCAGTGTGTTTGCCTGGGAGGGAAGAGCGGTTTGTTTTGAAGACTGATGACGTTGGGAAGGTGTCCGGGTGGGGTGTGTGGAATACAAACAGACCTGCATTACATTCCAAAAATCTCCAGTACGTACATTTACCCGTCACTGATTTTGAGACCTGTAAGGCTAAATATGACTCCACAGTGACAGATAAAGGGAAACTAGTAGTGACAGAGAACATGATATGTGCTGGGGTTGATGAGGGAGGAAAAGATTCCTGCCAGGGGGACAGTGGAGGACCCTACGCATTTTTGGACAGTCAGAGTAAAAGCTGGTTCATAGGCGGTATTGTGTCATGGGGTCATGGCTGCGCGCAGCCTGGGTATAATGGGGTTTATACCAAAGTGAAAAATTACCTTCCGTGGATTGAAGAAATCATGTCAAAAAACAGTTGAAACAGTTGTAAAAGTGTTCAAATGTTTGACTTTGATTTGATATGGATTTATCATTGGGCAAATTATTGTTAATTACTTTTACCATGACAGCTTTGCATGTGACGTCTCAGTCATACACATTTGTTTTTGTTTTATTAATCTTGGTTTTGTACAGCACTTTGGTCGGCACTTGCCGTTTTTAAAAGTGCTATATAAATAAACGAAACTAA

Function

symbol description
masp2 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within complement activation, lectin pathway and proteolysis. Predicted to be active in extracellular space. Is expressed in liver. Orthologous to human MASP2 (MBL associated serine protease 2).

GO:

id name namespace
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K03993 MASP2; mannan-binding lectin serine protease 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11265638_11283027.mRNA True 2272 mRNA 0.46 10 11265638 11283236

Neighbor

gene id symbol gene type direction distance location
CI01000001_11246797_11247315 CORT, SST3 coding upstream 18097 11246649 ~ 11247541 (+)
CI01000001_11232168_11238289 SRM coding upstream 26983 11232168 ~ 11238655 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding upstream 35317 11216246 ~ 11230321 (+)
CI01000001_11182552_11204143 NADL1.2 coding upstream 61139 11182552 ~ 11204499 (+)
CI01000001_11138617_11139541 NA coding upstream 125965 11138285 ~ 11139673 (+)
CI01000001_11359106_11376288 NA coding downstream 75870 11359106 ~ 11376885 (+)
CI01000001_11431153_11431434 NA coding downstream 146640 11429876 ~ 11431587 (+)
CI01000001_11440491_11445508 NA coding downstream 156743 11439979 ~ 11445540 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 372793 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 472925 11756161 ~ 11761497 (+)
G19226 NA non-coding upstream 81868 11169293 ~ 11183770 (+)
G19121 NA non-coding upstream 139479 11070904 ~ 11126159 (+)
G19130 NA non-coding upstream 279172 10925528 ~ 10986466 (+)
G19034 NA non-coding upstream 368733 10892437 ~ 10896905 (+)
G19088 NA non-coding upstream 390767 10874670 ~ 10874871 (+)
G19108 NA non-coding downstream 98338 11381574 ~ 11381987 (+)
G19258 NA non-coding downstream 104407 11387643 ~ 11387959 (+)
G19259 NA non-coding downstream 106319 11389555 ~ 11389858 (+)
G19266 NA non-coding downstream 144868 11428104 ~ 11493856 (+)
G19312 NA non-coding downstream 216981 11500217 ~ 11500514 (+)
G19039 NA other upstream 411655 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 725792 10538388 ~ 10539846 (+)
G18937 NA other upstream 789249 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 868933 10394851 ~ 10396705 (+)
G18872 NA other upstream 984269 10271146 ~ 10281369 (+)
G19314 NA other downstream 217958 11501194 ~ 11558673 (+)
G19395 NA other downstream 398086 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2230168 13514115 ~ 13517063 (+)

Expression


Co-expression Network