LOC122325460


Basic Information

Item Value
gene id LOC122325460
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21551685 ~ 21553114 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247302.1
TCAACAAAAACGGACTTTGGCGTGTGCATGCCACGCGATGTGAAGGGTTGTGTTTGTGAGGTGAGGCGAAAAATCATATGCAAGCCGAACACAAACACGCGCCAAAATCCATTTTTGTTTGCCACGTTTTCGTTTTTCTTCGGCACGCCACGCATTTCCACGAGACTGGGCTGCAGCCATTGAGGGCACAGTGTCACTTCAGCGACTAAAGGACCGCTCGCTAAACACTTGTGCGGGTTGATTTCATGATTGACGGGCCTCTTTAGAAAGGAGTTCACTCACCTGGATTTAACATGCACCGGAAACGCTCGATTTCACATTCTAAGCCCTGCTCAGAAAGCCGCTCCATCGACAGCGTCCTCTGCTGGAGAAAACACACTGGCTGATGTTCACGAAGAGATCCTCGCCTTTTTTGAGTTTAGACACAAATTTATATGAgaaatacctatatatatataattttttttgatggAAATATGCCGTGTAATAAAATCCCGATGGATAGCAAAGGAACTAGCCTGACTGACCCATTTATGAAGAGCTGATTCCGCTTCTGACCGCTAGATGGCAGCGCAGCAACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247302.1 True 583 lncRNA 0.46 3 21551685 21553114

Neighbor

gene id symbol gene type direction distance location
LOC122324300 kif3c,LOC107690993,LOC107593268,LOC107697206,LOC107721442,LOC107719402 coding upstream 1661 21534504 ~ 21550024 (+)
tfap2b tfap2b,LOC107697208,LOC107719371 coding upstream 124545 21414861 ~ 21427140 (+)
tfap2d tfap2d,LOC107690996,LOC107593304,LOC107721448,LOC107697209,LOC107550400 coding upstream 141036 21401025 ~ 21410649 (+)
hadhb hadhb,LOC107719432,LOC107721451,LOC107690999 coding upstream 226911 21315465 ~ 21324774 (+)
gareml LOC107691001,LOC107593273,LOC107550383,LOC107697211,LOC107719372,LOC107721452 coding upstream 246323 21287764 ~ 21305362 (+)
dtnba LOC107721443,LOC107685345,LOC107593267,LOC107550403 coding downstream 3651 21556765 ~ 21581534 (+)
dnmt3aa LOC107593266,LOC107721450,LOC107685348 coding downstream 30498 21583612 ~ 21621071 (+)
gpatch2 LOC107708325,LOC107593261,LOC107685352,LOC107550410 coding downstream 103549 21656663 ~ 21664934 (+)
esrrgb esrrgb,LOC107685376,LOC107697200,LOC107550385,LOC107719365,LOC107708321 coding downstream 114952 21668066 ~ 21680920 (+)
fosab LOC107697196,LOC107719360,LOC107685356,LOC107550415,LOC107742716 coding downstream 213300 21766414 ~ 21768602 (+)
G140691 NA non-coding upstream 32709 21516791 ~ 21518976 (+)
G140707 NA non-coding upstream 63442 21483605 ~ 21488243 (+)
G140708 NA non-coding upstream 68408 21482627 ~ 21483277 (+)
G140686 NA non-coding upstream 116889 21434593 ~ 21434796 (+)
G140673 NA non-coding upstream 121633 21429852 ~ 21430052 (+)
G140721 NA non-coding downstream 83395 21636509 ~ 21637194 (+)
G140698 NA non-coding downstream 145307 21698421 ~ 21699258 (+)
G140747 NA non-coding downstream 179461 21732575 ~ 21735672 (+)
LOC122325564 NA non-coding downstream 182852 21735966 ~ 21738747 (+)
G140784 NA non-coding downstream 287109 21840223 ~ 21840465 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 349723 21168775 ~ 21201962 (+)
G140533 NA other upstream 449175 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 759982 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 877296 20673461 ~ 20674389 (+)
trdn LOC107602167,LOC107727612,LOC107675223 other upstream 959526 20554113 ~ 20592159 (+)
G140785 NA other downstream 291032 21844146 ~ 21844701 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 918647 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 953613 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 1191298 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 1289691 22842805 ~ 22860327 (+)

Expression


Co-expression Network