Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000001_11385404_11386042 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 11383448 ~ 11388934 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000001_11385404_11386042.mRNA | False | 5353 | mRNA | 0.40 | 1 | 11383582 | 11388934 |
| TU23009 | False | 334 | lncRNA | 0.42 | 1 | 11383448 | 11383781 |
| TU23012 | True | 214 | lncRNA | 0.37 | 1 | 11387124 | 11387337 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_11288035_11293399 | NA | coding | downstream | 89499 | 11288028 ~ 11294083 (-) |
| CI01000001_11210296_11213607 | NA | coding | downstream | 169975 | 11210224 ~ 11213607 (-) |
| CI01000001_11089521_11092848 | NA | coding | downstream | 289951 | 11089420 ~ 11093631 (-) |
| CI01000001_11034064_11048961 | C1QL4.L, C1QL4, C1QL4A, C1QL4B | coding | downstream | 334621 | 11033863 ~ 11048961 (-) |
| CI01000001_11004027_11004884 | NEUROD4 | coding | downstream | 377949 | 11003614 ~ 11005633 (-) |
| CI01000001_11397805_11428592 | CASZ1 | coding | upstream | 8462 | 11397396 ~ 11428663 (-) |
| CI01000001_11446246_11449035 | NA | coding | upstream | 56952 | 11445886 ~ 11449066 (-) |
| CI01000001_11472071_11477723 | NA | coding | upstream | 83036 | 11471970 ~ 11477774 (-) |
| CI01000001_11649219_11650300 | NA | coding | upstream | 260128 | 11649062 ~ 11650300 (-) |
| CI01000001_11654628_11655345 | NA | coding | upstream | 265633 | 11654567 ~ 11655367 (-) |
| G20286 | NA | non-coding | downstream | 79689 | 10875115 ~ 11303893 (-) |
| G20375 | NA | non-coding | downstream | 90911 | 11193944 ~ 11292671 (-) |
| G20276 | NA | non-coding | downstream | 100231 | 11267587 ~ 11283351 (-) |
| G20385 | NA | non-coding | downstream | 157073 | 11223648 ~ 11226509 (-) |
| G20378 | NA | non-coding | downstream | 166193 | 11217021 ~ 11217389 (-) |
| G20494 | NA | non-coding | upstream | 274641 | 11663575 ~ 11663824 (-) |
| G20496 | NA | non-coding | upstream | 292326 | 11681260 ~ 11681753 (-) |
| G20501 | NA | non-coding | upstream | 444674 | 11833608 ~ 11833881 (-) |
| G20588 | NA | non-coding | upstream | 499578 | 11888512 ~ 11889125 (-) |
| CI01000001_11906787_11948732 | PIK3CD | non-coding | upstream | 501371 | 11906774 ~ 11949296 (-) |
| G20315 | NA | other | downstream | 262752 | 11116755 ~ 11120830 (-) |
| G20319 | NA | other | downstream | 268835 | 11110837 ~ 11114747 (-) |
| G20230 | NA | other | downstream | 354805 | 11022127 ~ 11028777 (-) |
| CI01000001_10862471_10864514 | NA | other | downstream | 518662 | 10862225 ~ 10865770 (-) |
| G20136 | NA | other | downstream | 843732 | 10539027 ~ 10539850 (-) |
| CI01000001_12878462_12899012 | NA | other | upstream | 1484464 | 12878365 ~ 12899469 (-) |
| CI01000001_12921289_12924608 | NA | other | upstream | 1531665 | 12920599 ~ 12925496 (-) |
| G20555 | NA | other | upstream | 1953055 | 13341989 ~ 13348146 (-) |
