CI01000001_11431153_11431434


Basic Information

Item Value
gene id CI01000001_11431153_11431434
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11429876 ~ 11431587 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11431153_11431434.mRNA
CTATTTAAGGGCAGAATTCTCTCACTGCTAAGTCACCCAAATCTGATGCAAAGATTTAGCAAAGTTCACTTTTAATAGGTTTTCCAGGCTTAAAATCGAGCCCGCTCGTAACAGTAAGATGTTTATCATGCAGTAAATAAAGAATGGGAAACCTGCGGGACGTAAAATGGTCTGTGGAACGCTTTAGCTGGTAGTTAGACGCTGTGTTGAGATGAGCTATTTCTAACCATCCCATGAAGCTGTCAATACAAAAGCTGTTTTGATTCGAATGGATGCTTTAACAAGAAAATCTCACATTGTTTTTGAAGGGAAAATGTGTAAATCGAAATCTAAATGTAACTTTTTTCTGCATAATGAGCTTTTCAAGGGACTCAAGGTTATATTCTAGATGTGCCGTGCACTCTCTGGCCCCAGCACATGCTTTCTCAGTTACTGTATTTACACTCAACACTTCCTCTCTGAAACAATGAGCTGAGGAATTATGCACGCTCCGCGCTGCACCAGATGCATCTGAACGCCTCAGAAGTGCACATTTTTACCTTAGACAATTGCAAGGCCCGGGTTGAAGAGGTCACCCAGTTGAGGACGGCAATTTTGATCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAATCAGCTGCAAAAACTATTAGGAAGTGGAAACATAAATTCTGAAGTATTTTTTCAGAACACCTCGAACGGAAGATTGAGGTCATTTGGGTGCAACAGTAAAGGTCATTTACTGTTTACCCTGCTCAGTATTTCACGCTTTAACTAGTGATTTCCTTTGCATTGCAATCTCGCTTTTCCTTGTAGGAAATGACCCCTGAGAAGCGATCTCATTCCATTACCCACAATTTATGTGCCTTTTTCCCAGCATCTAAAATTAACACTTGCCAAGTGGCAAAAGCAAGTAAAATTTTTCTTTGGTCTGTAATGCAAGTAGTGTTTATATATATATATATATATATATATATATATATATATATATGTATATATTACAAACAGCAAACCTCAATGATTTGATGCGTCCAAACGTGTTTCGGTGAAATGCTATTATTTCAGGCCCTCGAAGACGCCTGTCAGTGCTGAATAATAAACGAACGGTGGGGATGATCACAGCTAAAGCTTGTTTTCTTTAAGAGGTCCTGTTTATTTTAATGCTGACAATATTTTTACTGGAAATAGTACAGAGCTGCAATTGCCATAATGGTTTTACTGTATAAGGAGAAAACCTTTGCGAAAAAGTCAAGAAACTATTCTAAACAGATTCAACAATGAGAGTGAGAGAGCTTCTCCGTTTTATCTGCTCGCACATCAAAGGCCCCACAAGCCCTGTTTCTTTTCAGAACCGTGAGGCGGAGGACGCCGGGAATGACAGAAAATCTGCCTTGAACGTGGCTCTCCGGGCCCTGCATGTCTCGTTTAATGCGGAGCTTCTGTTTATGTGCCGGAATGATATCATGCCCAATCAAGTGGTGTTTCAAATCCTAATAATGCCGTTGGAAGTGCATTATTTGTACGAACGTGTGCTGACTGCAATCAGCCCACCAGAGTGAGGAAGTGGCTGTTAATGACTGCTTAGATTGGCGTGTCCTGTTCTTCCCTCTCTCCCTCTCTCTCCCGTTCTGACAGGAAGAGTATGCATTGCTAAAGCTGGGACATGACATACTCCTTCTCACCTGACATCAACTGCAGCGATTGTTCTAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11431153_11431434.mRNA True 1712 mRNA 0.41 1 11429876 11431587

Neighbor

gene id symbol gene type direction distance location
CI01000001_11359106_11376288 NA coding upstream 52991 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 146640 11265638 ~ 11283236 (+)
CI01000001_11246797_11247315 CORT, SST3 coding upstream 182335 11246649 ~ 11247541 (+)
CI01000001_11232168_11238289 SRM coding upstream 191221 11232168 ~ 11238655 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding upstream 199555 11216246 ~ 11230321 (+)
CI01000001_11440491_11445508 NA coding downstream 8392 11439979 ~ 11445540 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 224442 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 324574 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 377840 11809427 ~ 11813444 (+)
CI01000001_11898621_11898914 NA coding downstream 466710 11898297 ~ 11900188 (+)
G19259 NA non-coding upstream 40018 11389555 ~ 11389858 (+)
G19258 NA non-coding upstream 41917 11387643 ~ 11387959 (+)
G19108 NA non-coding upstream 47889 11381574 ~ 11381987 (+)
G19096 NA non-coding upstream 125852 11255069 ~ 11304024 (+)
G19226 NA non-coding upstream 246106 11169293 ~ 11183770 (+)
G19312 NA non-coding downstream 68630 11500217 ~ 11500514 (+)
G19349 NA non-coding downstream 237377 11668964 ~ 11670995 (+)
G19394 NA non-coding downstream 249120 11680707 ~ 11680946 (+)
G19351 NA non-coding downstream 250970 11682557 ~ 11687675 (+)
G19362 NA non-coding downstream 258338 11689925 ~ 11690609 (+)
G19039 NA other upstream 575893 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 890030 10538388 ~ 10539846 (+)
G18937 NA other upstream 953487 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 1033171 10394851 ~ 10396705 (+)
G18872 NA other upstream 1148507 10271146 ~ 10281369 (+)
G19314 NA other downstream 69607 11501194 ~ 11558673 (+)
G19395 NA other downstream 249735 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2081817 13514115 ~ 13517063 (+)

Expression


Co-expression Network